| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876012
Identifier: 160876012
GI number: 160876012
Start: 3451698
End: 3452306
Strand: Reverse
Name: 160876012
Synonym: Sbal195_2902
Alternate gene names: NA
Gene position: 3452306-3451698 (Counterclockwise)
Preceding gene: 160876015
Following gene: 160876011
Centisome position: 64.56
GC content: 54.02
Gene sequence:
>609_bases ATGAACACTGCCGCAGCTATCGCTGAACTCACTCGCCGTATCGATAACCTTTTACGCATAGGCACCGTTGCCGAAGTAAA GGGCGATTCGTGCCGCGTAAAAACGGGCGAATTACTCACCCAGTTCCGGCCCTTCTTTACCCGCCGTGCCGGCACGGCCA AAACCAGCTGGCGGCCAACTGTGGGGGAGCAGGTGATGCTGTTATCACTCAGCGGCGACCTGACGAACGCCTACATTCTT CCTGCCCTTTATAGCGATGAAAACCCAGAGCCTGACGATAACGACAATCGTGAACGCACCGTTTATCCAGATGGCGCTGT GATTGAATACGACCCCGATACCAGCGCGCTTAAGGTGAGCGGCATTAAAACCGCCAGCGTACAGGCGAGCGAGCGGGTCA CTATCGACTGCCCCAATTCGGTATTTACGGGCAACTTGCAGGTCAAGAAAATGCTTACCGTAGATCAAGGAGCTAAGGTC ACGGGAGCGATTGAACACAAAGGAAAAATGACGAATTCAGGCGGCATAAGCATCGATGGCATTAACTTCGGTACCCATAA ACATGGTGGTGTCGATACCGGCTCGGGCACTTCAGGAGGCCCGCAATGA
Upstream 100 bases:
>100_bases ATGGGGCAAAAATGATTTTAAATTTATATCTTGCGCTATAACTCCCCACATACCACCCAAAGCCTTTGCGGCTAGCCATA CAACTGGCAACCATAGCCGC
Downstream 100 bases:
>100_bases GTGCCAATGAAAAATGGCAAGGTATGAATCGCTTTACTGGCCAAAGCATTAGCGAGTCGCAGCATATCAGCCAAAGTATC CAGGACATATTAACCACGCC
Product: phage baseplate assembly protein V
Products: NA
Alternate protein names: Baseplate Assembly Protein V; Phage Baseplate Assembly Protein; Phage-Related Baseplate Assembly Protein; Phage-Related Baseplate Protein; Baseplate Assembly Protein GpV; Phage-Related Baseplate Assembly Protein V; Baseplate Assembly Protein; Phage P2-Like Baseplate Assembly Protein; Phage P2 Baseplate Assembly GpV Protein; Bacteriophage Baseplate Assembly Protein V; Phage Baseplate Component; Baseplate Assembly Protein V Prophage; Prophage Baseplate Assembly Protein; Phage P2 Baseplate Assembly GpV-Like Protein; Phage Baseplate Assembly-Like Protein; Bacteriophage P2 Baseplate Assembly Protein GPV; Phage P2 Baseplate Assembly Protein GpV
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MNTAAAIAELTRRIDNLLRIGTVAEVKGDSCRVKTGELLTQFRPFFTRRAGTAKTSWRPTVGEQVMLLSLSGDLTNAYIL PALYSDENPEPDDNDNRERTVYPDGAVIEYDPDTSALKVSGIKTASVQASERVTIDCPNSVFTGNLQVKKMLTVDQGAKV TGAIEHKGKMTNSGGISIDGINFGTHKHGGVDTGSGTSGGPQ
Sequences:
>Translated_202_residues MNTAAAIAELTRRIDNLLRIGTVAEVKGDSCRVKTGELLTQFRPFFTRRAGTAKTSWRPTVGEQVMLLSLSGDLTNAYIL PALYSDENPEPDDNDNRERTVYPDGAVIEYDPDTSALKVSGIKTASVQASERVTIDCPNSVFTGNLQVKKMLTVDQGAKV TGAIEHKGKMTNSGGISIDGINFGTHKHGGVDTGSGTSGGPQ >Mature_202_residues MNTAAAIAELTRRIDNLLRIGTVAEVKGDSCRVKTGELLTQFRPFFTRRAGTAKTSWRPTVGEQVMLLSLSGDLTNAYIL PALYSDENPEPDDNDNRERTVYPDGAVIEYDPDTSALKVSGIKTASVQASERVTIDCPNSVFTGNLQVKKMLTVDQGAKV TGAIEHKGKMTNSGGISIDGINFGTHKHGGVDTGSGTSGGPQ
Specific function: Unknown
COG id: COG4540
COG function: function code R; Phage P2 baseplate assembly protein gpV
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21529; Mature: 21529
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTAAAIAELTRRIDNLLRIGTVAEVKGDSCRVKTGELLTQFRPFFTRRAGTAKTSWRPT CCHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCC VGEQVMLLSLSGDLTNAYILPALYSDENPEPDDNDNRERTVYPDGAVIEYDPDTSALKVS CCCEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCEEECCCCCEEEECCCCCEEEEC GIKTASVQASERVTIDCPNSVFTGNLQVKKMLTVDQGAKVTGAIEHKGKMTNSGGISIDG CCEEEEECCCCEEEEECCCCEEECCEEEEEEEEECCCCEEEEEEECCCCCCCCCCEEEEC INFGTHKHGGVDTGSGTSGGPQ EECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNTAAAIAELTRRIDNLLRIGTVAEVKGDSCRVKTGELLTQFRPFFTRRAGTAKTSWRPT CCHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCC VGEQVMLLSLSGDLTNAYILPALYSDENPEPDDNDNRERTVYPDGAVIEYDPDTSALKVS CCCEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCEEECCCCCEEEECCCCCEEEEC GIKTASVQASERVTIDCPNSVFTGNLQVKKMLTVDQGAKVTGAIEHKGKMTNSGGISIDG CCEEEEECCCCEEEEECCCCEEECCEEEEEEEEECCCCEEEEEEECCCCCCCCCCEEEEC INFGTHKHGGVDTGSGTSGGPQ EECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA