| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875974
Identifier: 160875974
GI number: 160875974
Start: 3413422
End: 3414126
Strand: Direct
Name: 160875974
Synonym: Sbal195_2864
Alternate gene names: NA
Gene position: 3413422-3414126 (Clockwise)
Preceding gene: 160875973
Following gene: 160875975
Centisome position: 63.83
GC content: 44.54
Gene sequence:
>705_bases ATGGATGAGCTTAAATTTAGACGTCAAGCTTATGAAGATCCTCATAATCAAGATGCTGATTTTCTGGCGCAAATTAATGC TAAGCCAGAAAACCAAGCCTTAATCAATGAGCTCAAAAACCTTGATGCCAAACTGACAAATGCATTGAAAGTAGAGGTGG CGGACGATCTCGCCGATAAACTGATTTTGCGTCAGCAGTTACAACAACACCATAAACACCGCCGTCAGACGGGCTTTTTA GTGGCGATGGCGGCCTCGGTGGCATTTGTGGTGGGGATCAGTTTTAGTCTATTGCGTTTAGGGCCAATCGATTTAGCCGA ACATGCACTGGCCCATGTCTACCATGAAGGTGTTGCTTTACAGGTGGATCAAAACGTCAACTTTAATCAGGTCAATGCGC AGCTCGCGTCGATGAAAGACTTTGGCAATGCCAAGTTCACCCAACAACCGGGCAAAGTGTATTACACCTCCTATTGCGAT TTTCAAGGGGTGAAAAGCCTGCACTTAGTGCTACAGGGCGAGCAAAGCAAGGTCACACTCTTTATCGTGCCACTCGAAAA ACGTATGGTGTTAGACAAAACCTTCGCCGATGGCAAATACCAAGGAATGGGCTTTGAAACACCCGATGCGTTTATTTTAC TTATAGGTGAAGATAAAGCAGACCTTAGCTATGTAAAAGACGAAATCAAGAACACCTTTATCTAA
Upstream 100 bases:
>100_bases CTGATGGAGCTCAATCGCAACACCGTAATGACGCGTTTATTTCGGGCGAGGAGCCAATTGAAAGAATTACTTGAGAAGAA TGATGTGAGAGGTCAATCCA
Downstream 100 bases:
>100_bases CCCCATCTTATCTCGGCTATTTTTAAATTAACCTCCGATATTTTCACTCTATCGGAGGTTAGATTTTAATCACACTTCTA TCTGCTAATGGGCGATTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MDELKFRRQAYEDPHNQDADFLAQINAKPENQALINELKNLDAKLTNALKVEVADDLADKLILRQQLQQHHKHRRQTGFL VAMAASVAFVVGISFSLLRLGPIDLAEHALAHVYHEGVALQVDQNVNFNQVNAQLASMKDFGNAKFTQQPGKVYYTSYCD FQGVKSLHLVLQGEQSKVTLFIVPLEKRMVLDKTFADGKYQGMGFETPDAFILLIGEDKADLSYVKDEIKNTFI
Sequences:
>Translated_234_residues MDELKFRRQAYEDPHNQDADFLAQINAKPENQALINELKNLDAKLTNALKVEVADDLADKLILRQQLQQHHKHRRQTGFL VAMAASVAFVVGISFSLLRLGPIDLAEHALAHVYHEGVALQVDQNVNFNQVNAQLASMKDFGNAKFTQQPGKVYYTSYCD FQGVKSLHLVLQGEQSKVTLFIVPLEKRMVLDKTFADGKYQGMGFETPDAFILLIGEDKADLSYVKDEIKNTFI >Mature_234_residues MDELKFRRQAYEDPHNQDADFLAQINAKPENQALINELKNLDAKLTNALKVEVADDLADKLILRQQLQQHHKHRRQTGFL VAMAASVAFVVGISFSLLRLGPIDLAEHALAHVYHEGVALQVDQNVNFNQVNAQLASMKDFGNAKFTQQPGKVYYTSYCD FQGVKSLHLVLQGEQSKVTLFIVPLEKRMVLDKTFADGKYQGMGFETPDAFILLIGEDKADLSYVKDEIKNTFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26394; Mature: 26394
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDELKFRRQAYEDPHNQDADFLAQINAKPENQALINELKNLDAKLTNALKVEVADDLADK CCCHHHHHHHHCCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHEEEEEHHHHHHH LILRQQLQQHHKHRRQTGFLVAMAASVAFVVGISFSLLRLGPIDLAEHALAHVYHEGVAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEE QVDQNVNFNQVNAQLASMKDFGNAKFTQQPGKVYYTSYCDFQGVKSLHLVLQGEQSKVTL EEECCCCHHHHHHHHHHHHHCCCCCEECCCCCEEEEEECCCCCCCEEEEEEECCCCEEEE FIVPLEKRMVLDKTFADGKYQGMGFETPDAFILLIGEDKADLSYVKDEIKNTFI EEEECCHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MDELKFRRQAYEDPHNQDADFLAQINAKPENQALINELKNLDAKLTNALKVEVADDLADK CCCHHHHHHHHCCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHEEEEEHHHHHHH LILRQQLQQHHKHRRQTGFLVAMAASVAFVVGISFSLLRLGPIDLAEHALAHVYHEGVAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEE QVDQNVNFNQVNAQLASMKDFGNAKFTQQPGKVYYTSYCDFQGVKSLHLVLQGEQSKVTL EEECCCCHHHHHHHHHHHHHCCCCCEECCCCCEEEEEECCCCCCCEEEEEEECCCCEEEE FIVPLEKRMVLDKTFADGKYQGMGFETPDAFILLIGEDKADLSYVKDEIKNTFI EEEECCHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA