| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yciI [H]
Identifier: 160875926
GI number: 160875926
Start: 3351947
End: 3352246
Strand: Direct
Name: yciI [H]
Synonym: Sbal195_2815
Alternate gene names: 160875926
Gene position: 3351947-3352246 (Clockwise)
Preceding gene: 160875925
Following gene: 160875927
Centisome position: 62.69
GC content: 49.33
Gene sequence:
>300_bases ATGTGGTATATGATTTCAGCTCAAGATTTTGAGAACAGTTTAGAAAAACGTTTAGCCGCTCGCCCTGCCCATTTAGCTCG CCTGCAAGCTCTCGCCGATGAAGGTCGTTTACTGATCGCTGGCCCACATCCAGCCATTGACAGCGAAAACCCAGGTGATG CTGGCTTTAGTGGTTCACTGGTTGTCGCCGATTTTGAATCCTTAGTGGCAGCAAAACACTGGGCCGATGCCGATCCTTAT ATCGAAGCGGGCGTGTATAAAAGCGTGGTCGTTAAACCTTTCAAACGAGTCCTGCCCTAA
Upstream 100 bases:
>100_bases AAGTGTTTGGTTTAACCGCTTTAACCTTAATTAATACTGTCCTGACCGTATTTTATCTTTATAAACACCTTCCCGAAGAT CAACGCAAGGAACTCAAATA
Downstream 100 bases:
>100_bases TGAAAATAGTGTCCTTTAACATCAATGGTCTGCGCGCGCGCTTGCATCAATTACAAGCCTTAATCGACAGCCACCAGCCC GACATTATCGGCCTGCAAGA
Product: YciI-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MWYMISAQDFENSLEKRLAARPAHLARLQALADEGRLLIAGPHPAIDSENPGDAGFSGSLVVADFESLVAAKHWADADPY IEAGVYKSVVVKPFKRVLP
Sequences:
>Translated_99_residues MWYMISAQDFENSLEKRLAARPAHLARLQALADEGRLLIAGPHPAIDSENPGDAGFSGSLVVADFESLVAAKHWADADPY IEAGVYKSVVVKPFKRVLP >Mature_99_residues MWYMISAQDFENSLEKRLAARPAHLARLQALADEGRLLIAGPHPAIDSENPGDAGFSGSLVVADFESLVAAKHWADADPY IEAGVYKSVVVKPFKRVLP
Specific function: Unknown
COG id: COG2350
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the yciI family [H]
Homologues:
Organism=Escherichia coli, GI87081861, Length=98, Percent_Identity=69.3877551020408, Blast_Score=140, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011008 - InterPro: IPR005545 [H]
Pfam domain/function: PF03795 YCII [H]
EC number: NA
Molecular weight: Translated: 10775; Mature: 10775
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWYMISAQDFENSLEKRLAARPAHLARLQALADEGRLLIAGPHPAIDSENPGDAGFSGSL CEEEECHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCE VVADFESLVAAKHWADADPYIEAGVYKSVVVKPFKRVLP EEECHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MWYMISAQDFENSLEKRLAARPAHLARLQALADEGRLLIAGPHPAIDSENPGDAGFSGSL CEEEECHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCE VVADFESLVAAKHWADADPYIEAGVYKSVVVKPFKRVLP EEECHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]