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The map label for this gene is scpB [H]

Identifier: 160875908

GI number: 160875908

Start: 3330878

End: 3331474

Strand: Reverse

Name: scpB [H]

Synonym: Sbal195_2797

Alternate gene names: 160875908

Gene position: 3331474-3330878 (Counterclockwise)

Preceding gene: 160875909

Following gene: 160875907

Centisome position: 62.3

GC content: 44.72

Gene sequence:

>597_bases
ATGCAGATAAATCCGACTCAATTAAAACAGCTTATTGAAGCGAGTTTGTTTGTATTGGGGAAACCCTTGTCGGCGAAAAT
GTTGAAAGACACTGTATTGGTGGATTTCACGGTTTCCAGAGACAAAATAAAAGCTGCATTGGATGAGCTGCAGCAGGATT
ATCAAGACAGAGGTGTGCAACTTGTGAAAGTCGCTGGGGGTTATCGCTTCCAGACCTTAGAAGTCTTGAGTCCTTTTTTG
CAGCCCCTGTGGCAAGAAAAGGCGCCTAAATATTCGCGTGCGACATTAGAAACCTTGGCGGTGATTGCTTATCGTCAACC
TGTGACTCGCGGCGATATTGAACAGGTGCGCGGTGTGGCCATTAGTAGTCACATCATAAAAAGTTTGTCAGATAGACATT
GGATTAAAGTAGTTGGCCATAAAGAAGTACCGGGGCGACCCGCGTTATATGCCACTACCTTAGAATTTTTAGCATATTTT
GGCTTAGACACCTTAGCGGATTTACCGCCGCTGTCGGATACTGAGTCATTGCAGGCGGTTTTTTCAAGTGTGAGATTAAC
GCCGGAACAGTCAGAAGAGCAAAATACTAATGAGTGA

Upstream 100 bases:

>100_bases
CGTGACCTTCTTAGCATTGATGGAATTAGTCAAAGAATTATTGGTTGAATTGTACCAAACAGAACCGTTTTCAACTATTT
ACGTTAAGGCCTATTAATTG

Downstream 100 bases:

>100_bases
AAAATTGCAGAAAGTCTTGGCCCGTGCAGGCCATGGCTCCCGTCGTGAGATGGAGGCATGGATTGCTGCAGGCCGAGTTA
GTATTGATGGTGAAATTGCT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MQINPTQLKQLIEASLFVLGKPLSAKMLKDTVLVDFTVSRDKIKAALDELQQDYQDRGVQLVKVAGGYRFQTLEVLSPFL
QPLWQEKAPKYSRATLETLAVIAYRQPVTRGDIEQVRGVAISSHIIKSLSDRHWIKVVGHKEVPGRPALYATTLEFLAYF
GLDTLADLPPLSDTESLQAVFSSVRLTPEQSEEQNTNE

Sequences:

>Translated_198_residues
MQINPTQLKQLIEASLFVLGKPLSAKMLKDTVLVDFTVSRDKIKAALDELQQDYQDRGVQLVKVAGGYRFQTLEVLSPFL
QPLWQEKAPKYSRATLETLAVIAYRQPVTRGDIEQVRGVAISSHIIKSLSDRHWIKVVGHKEVPGRPALYATTLEFLAYF
GLDTLADLPPLSDTESLQAVFSSVRLTPEQSEEQNTNE
>Mature_198_residues
MQINPTQLKQLIEASLFVLGKPLSAKMLKDTVLVDFTVSRDKIKAALDELQQDYQDRGVQLVKVAGGYRFQTLEVLSPFL
QPLWQEKAPKYSRATLETLAVIAYRQPVTRGDIEQVRGVAISSHIIKSLSDRHWIKVVGHKEVPGRPALYATTLEFLAYF
GLDTLADLPPLSDTESLQAVFSSVRLTPEQSEEQNTNE

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 22210; Mature: 22210

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQINPTQLKQLIEASLFVLGKPLSAKMLKDTVLVDFTVSRDKIKAALDELQQDYQDRGVQ
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHCCEE
LVKVAGGYRFQTLEVLSPFLQPLWQEKAPKYSRATLETLAVIAYRQPVTRGDIEQVRGVA
EEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
ISSHIIKSLSDRHWIKVVGHKEVPGRPALYATTLEFLAYFGLDTLADLPPLSDTESLQAV
HHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHH
FSSVRLTPEQSEEQNTNE
HHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MQINPTQLKQLIEASLFVLGKPLSAKMLKDTVLVDFTVSRDKIKAALDELQQDYQDRGVQ
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHCCEE
LVKVAGGYRFQTLEVLSPFLQPLWQEKAPKYSRATLETLAVIAYRQPVTRGDIEQVRGVA
EEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
ISSHIIKSLSDRHWIKVVGHKEVPGRPALYATTLEFLAYFGLDTLADLPPLSDTESLQAV
HHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHH
FSSVRLTPEQSEEQNTNE
HHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]