Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160875885
Identifier: 160875885
GI number: 160875885
Start: 3305999
End: 3306433
Strand: Direct
Name: 160875885
Synonym: Sbal195_2774
Alternate gene names: NA
Gene position: 3305999-3306433 (Clockwise)
Preceding gene: 160875884
Following gene: 160875887
Centisome position: 61.83
GC content: 45.29
Gene sequence:
>435_bases ATGCGAACTCTATTTTTTATCTCCCTGCTGTTCCTCTTTGGTTGCGGCGATCCCTCTACCGAAGATCAACGCCAGTTATC GCCCGAAGAAGTGAGCTTAGGCTTTTTTAAAGCGATTTATGTCGATCGCGATGTTGAACAAGCCAAGCAATTTGTCGATG AGCCAATTAAACAAGTGCTCACCCATTACTATATTGCCGCCGCAGTGCAGCGCAATATGCTCGGCCTGTCGATGACCAAT GTTGAAATGGAAATTGATGATATCGATATCGACTTCTTCCGTAAATTTACCAAAGACGTCATTGTCGTGATCAAAATGAA AGGGCTTAAAGGCGGTCAGCCGTGGATTGATGACAGGACCATACGCCTTCACAAGATTGGCAGTAAGTGGACTATCGTCG AGCTGATGCCAGAAAAGCGCAAAGTAAACGGTTAA
Upstream 100 bases:
>100_bases TTGAGTCAACGCATTTCCCAATAGATTGCAAATAACGACAAAACTTGTGCATTAAGTCTAAAATCGCGATACTCAGAACA AATTCCAATAACTAAAACTT
Downstream 100 bases:
>100_bases TCTCCCTTCCCGCTCGCCACTTTTATTGTGCATGTCTTGTCATGTGCTCAATCCTAGCGCCGATTTCAGCTAAAAAAATA GCAACCCTAAGGTTGCTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MRTLFFISLLFLFGCGDPSTEDQRQLSPEEVSLGFFKAIYVDRDVEQAKQFVDEPIKQVLTHYYIAAAVQRNMLGLSMTN VEMEIDDIDIDFFRKFTKDVIVVIKMKGLKGGQPWIDDRTIRLHKIGSKWTIVELMPEKRKVNG
Sequences:
>Translated_144_residues MRTLFFISLLFLFGCGDPSTEDQRQLSPEEVSLGFFKAIYVDRDVEQAKQFVDEPIKQVLTHYYIAAAVQRNMLGLSMTN VEMEIDDIDIDFFRKFTKDVIVVIKMKGLKGGQPWIDDRTIRLHKIGSKWTIVELMPEKRKVNG >Mature_144_residues MRTLFFISLLFLFGCGDPSTEDQRQLSPEEVSLGFFKAIYVDRDVEQAKQFVDEPIKQVLTHYYIAAAVQRNMLGLSMTN VEMEIDDIDIDFFRKFTKDVIVVIKMKGLKGGQPWIDDRTIRLHKIGSKWTIVELMPEKRKVNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16690; Mature: 16690
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLFFISLLFLFGCGDPSTEDQRQLSPEEVSLGFFKAIYVDRDVEQAKQFVDEPIKQVL CHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH THYYIAAAVQRNMLGLSMTNVEMEIDDIDIDFFRKFTKDVIVVIKMKGLKGGQPWIDDRT HHHHHHHHHHHHHHCEEEECEEEEECCCCHHHHHHHHHHEEEEEEECCCCCCCCCCCCCE IRLHKIGSKWTIVELMPEKRKVNG EEEEECCCCEEEEEECCCCCCCCC >Mature Secondary Structure MRTLFFISLLFLFGCGDPSTEDQRQLSPEEVSLGFFKAIYVDRDVEQAKQFVDEPIKQVL CHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH THYYIAAAVQRNMLGLSMTNVEMEIDDIDIDFFRKFTKDVIVVIKMKGLKGGQPWIDDRT HHHHHHHHHHHHHHCEEEECEEEEECCCCHHHHHHHHHHEEEEEEECCCCCCCCCCCCCE IRLHKIGSKWTIVELMPEKRKVNG EEEEECCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA