| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is fabH [H]
Identifier: 160875873
GI number: 160875873
Start: 3286442
End: 3287563
Strand: Reverse
Name: fabH [H]
Synonym: Sbal195_2762
Alternate gene names: 160875873
Gene position: 3287563-3286442 (Counterclockwise)
Preceding gene: 160875874
Following gene: 160875871
Centisome position: 61.48
GC content: 46.88
Gene sequence:
>1122_bases ATGAAACAGGTCGTGATTTCGGGGAGTGGCTTATTTACGCCGCCCCACAGTATTTCTAATGAAGCCTTAGTTGAGAGCTT CAATGCCTATGTGGATATTTACAATCTTGAAAATGCAGGCTTAATCGAGCAAGGCCATGTCGAGGCTTTGTCCTATTCCT CGAGCGAATTTATTGAAAAGGCCTCGGGCATCAAGCACAGATATGTGATGGTGAAAGAGGGCATTCTCGATCCCGAAGTC ATGATGCCGTTAATTCCAGAGCGCAGCAGCGACGAGTTATCTATGCAGGCTGAAATTGGGGTTGAAGCCGCATTGATGGC ACTTAACAATGCCAATCTCAAAGCTGAGCAGATTGATTTGGTGATTGTCGCCTGTGCTTATACTCAGCGTGCCTATCCTG CGATGGCAATTGAAATTCAACGTGCGCTCGGTACGCGCGGTTATGGCTATGATATGCAAGTGGCGTGTTCATCGGCAACC TTTGCAATTGTTGCCGCAGCCAATGCGATTGCGACGGGCTCAGCTTCAAGAGTACTCGTCATCAACCCAGAGATTTGTTC GGCGCAGGTGAATTATCGCGACCGTGACAGCCATTTTATCTTTGGTGATGTCGCGACTGCTCTCGTACTGGAAGAGCAAA GCCTAGCTCAATCTGACAATGTGTTTAAAATTCTCTCAAGCCTCTGTTTTACTGATTATTCGAATAATATTCGCAGTAAT TTTGGTTTCTTGAATCGCTGCGATCCGAGTGCTGCCCATCAGGCCGATAAATTGTTCCACCAACAAGGGCGCAAAGTGTT TAAAGAGCTCCTGCCTATGATTTATCAACATTTGGATGAACATCTGGCCGAACAAGCGTTAACGCCGCAGTCTTTTAAGC GTCTGTGGTTGCATCAAGCGAATATCAACATGAATCAGTTTGTGGTGAGAAAGCTGCTTGGGGATGATGTGTCAGCGGAA CAAGCGCCTGTCGTGTTAGACGAGTACGCCAATACCGCATCCGCGGGCTCTGTGATTGCATTTCATAAGTATTCCAGCGA CTTTAAAGCGGGTGATTTAGGCTTATTAAGTTCTTTTGGCGCGGGATATTCCATCGGCAGTGTGATTTTGCAGAAGTGCT AA
Upstream 100 bases:
>100_bases TAGAGCAGCAAGTACAGGGGCAAAGTGAGTTAGCGCCCGCGCTTACGAGTGATGATGCCGCCTCTGCTCACCTTACAACA AGCACCCGTTCGGAGCACCT
Downstream 100 bases:
>100_bases GCTGAACTTGGCAGCGCAGATTGTTCTGCGATCTTTATCAATAAAAAATCTCTCTATAGAAAATTTTTTAATAAAAAGCC TATCAATAAAAACAGCCTCA
Product: 3-oxoacyl-(acyl carrier protein) synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III [H]
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MKQVVISGSGLFTPPHSISNEALVESFNAYVDIYNLENAGLIEQGHVEALSYSSSEFIEKASGIKHRYVMVKEGILDPEV MMPLIPERSSDELSMQAEIGVEAALMALNNANLKAEQIDLVIVACAYTQRAYPAMAIEIQRALGTRGYGYDMQVACSSAT FAIVAAANAIATGSASRVLVINPEICSAQVNYRDRDSHFIFGDVATALVLEEQSLAQSDNVFKILSSLCFTDYSNNIRSN FGFLNRCDPSAAHQADKLFHQQGRKVFKELLPMIYQHLDEHLAEQALTPQSFKRLWLHQANINMNQFVVRKLLGDDVSAE QAPVVLDEYANTASAGSVIAFHKYSSDFKAGDLGLLSSFGAGYSIGSVILQKC
Sequences:
>Translated_373_residues MKQVVISGSGLFTPPHSISNEALVESFNAYVDIYNLENAGLIEQGHVEALSYSSSEFIEKASGIKHRYVMVKEGILDPEV MMPLIPERSSDELSMQAEIGVEAALMALNNANLKAEQIDLVIVACAYTQRAYPAMAIEIQRALGTRGYGYDMQVACSSAT FAIVAAANAIATGSASRVLVINPEICSAQVNYRDRDSHFIFGDVATALVLEEQSLAQSDNVFKILSSLCFTDYSNNIRSN FGFLNRCDPSAAHQADKLFHQQGRKVFKELLPMIYQHLDEHLAEQALTPQSFKRLWLHQANINMNQFVVRKLLGDDVSAE QAPVVLDEYANTASAGSVIAFHKYSSDFKAGDLGLLSSFGAGYSIGSVILQKC >Mature_373_residues MKQVVISGSGLFTPPHSISNEALVESFNAYVDIYNLENAGLIEQGHVEALSYSSSEFIEKASGIKHRYVMVKEGILDPEV MMPLIPERSSDELSMQAEIGVEAALMALNNANLKAEQIDLVIVACAYTQRAYPAMAIEIQRALGTRGYGYDMQVACSSAT FAIVAAANAIATGSASRVLVINPEICSAQVNYRDRDSHFIFGDVATALVLEEQSLAQSDNVFKILSSLCFTDYSNNIRSN FGFLNRCDPSAAHQADKLFHQQGRKVFKELLPMIYQHLDEHLAEQALTPQSFKRLWLHQANINMNQFVVRKLLGDDVSAE QAPVVLDEYANTASAGSVIAFHKYSSDFKAGDLGLLSSFGAGYSIGSVILQKC
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
Organism=Escherichia coli, GI1787333, Length=317, Percent_Identity=27.4447949526814, Blast_Score=104, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.180 [H]
Molecular weight: Translated: 40795; Mature: 40795
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQVVISGSGLFTPPHSISNEALVESFNAYVDIYNLENAGLIEQGHVEALSYSSSEFIEK CCEEEEECCCCCCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHCCCHHHHHHH ASGIKHRYVMVKEGILDPEVMMPLIPERSSDELSMQAEIGVEAALMALNNANLKAEQIDL HCCCCEEEEEEECCCCCHHHHHCCCCCCCCCCEEEHHHHCHHHHHHHHCCCCCCHHHEEE VIVACAYTQRAYPAMAIEIQRALGTRGYGYDMQVACSSATFAIVAAANAIATGSASRVLV EEEEEEHHHCCCCHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEEEHHHHCCCCCCEEEE INPEICSAQVNYRDRDSHFIFGDVATALVLEEQSLAQSDNVFKILSSLCFTDYSNNIRSN ECCCCCEEECCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHC FGFLNRCDPSAAHQADKLFHQQGRKVFKELLPMIYQHLDEHLAEQALTPQSFKRLWLHQA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC NINMNQFVVRKLLGDDVSAEQAPVVLDEYANTASAGSVIAFHKYSSDFKAGDLGLLSSFG CCCHHHHHHHHHHCCCCCCCCCCEEHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHCC AGYSIGSVILQKC CCHHHHHHHHHCC >Mature Secondary Structure MKQVVISGSGLFTPPHSISNEALVESFNAYVDIYNLENAGLIEQGHVEALSYSSSEFIEK CCEEEEECCCCCCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHCCCHHHHHHH ASGIKHRYVMVKEGILDPEVMMPLIPERSSDELSMQAEIGVEAALMALNNANLKAEQIDL HCCCCEEEEEEECCCCCHHHHHCCCCCCCCCCEEEHHHHCHHHHHHHHCCCCCCHHHEEE VIVACAYTQRAYPAMAIEIQRALGTRGYGYDMQVACSSATFAIVAAANAIATGSASRVLV EEEEEEHHHCCCCHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEEEHHHHCCCCCCEEEE INPEICSAQVNYRDRDSHFIFGDVATALVLEEQSLAQSDNVFKILSSLCFTDYSNNIRSN ECCCCCEEECCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHC FGFLNRCDPSAAHQADKLFHQQGRKVFKELLPMIYQHLDEHLAEQALTPQSFKRLWLHQA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC NINMNQFVVRKLLGDDVSAEQAPVVLDEYANTASAGSVIAFHKYSSDFKAGDLGLLSSFG CCCHHHHHHHHHHCCCCCCCCCCEEHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHCC AGYSIGSVILQKC CCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA