| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is zipA
Identifier: 160875870
GI number: 160875870
Start: 3280757
End: 3281827
Strand: Reverse
Name: zipA
Synonym: Sbal195_2759
Alternate gene names: 160875870
Gene position: 3281827-3280757 (Counterclockwise)
Preceding gene: 160875871
Following gene: 160875869
Centisome position: 61.37
GC content: 47.43
Gene sequence:
>1071_bases ATGGAAGATTTGCAACTAGTATTGTTTGTTTTAGGCGCCATAGCCATAGTTGCTGTGCTGGTGCATGGATTTTGGTCTAT CAGAAGACAACAACCTAAGTCATTGAAAGATAGTCCAATGGGCAATTTTTATAAGAAACAGGCCGAGAAAGGTGAGTCGA TCCCTAAGCGAATTGATGCCGAAGGATTTGATGCCGACGGTATTGGCGCTGTGCGAGTGCGTAAAGCTGGCGAACTTGCG CCTAACAACGAGACTCCTACGGCCAATCCTTATTTGAAACAAGAAGTAAAGCTAGAGACTAAGCCGCAAGAATTGACATC GCCAGAATTTAAAGCAGAACTTAAACAAGGGCTTAAACCAGAGCTAAAAGTAGAAGCGAAACACGAACCTATTCCAGCTC AGCCAGATTTTAGCTTACAGCCACCTGTGGCAAAAGAGCAACACCGTGGTCCTAAAGTCTCGCGTCAAGAGCCCGTCTTG GGCACGCAAGTACCGCAAATGGGTCAATCCCATGCTGCTATTGTGGCGCAAAAAGCCGCAGAGCAAGAACAGGCGCTACG TGCCGCGCCGCAGCAAAGCGCCTTGTTTGAAGAAAATGAACATCAAGCAGACCATCAAGAAGAGGCTTTTGTCGAACAAG CCGCTGAAGATGAATTAGGTGAGCCACGCGACGTGCTGGTTTTACATGTGGTCGCAAAAGATGGCCAACAGCTGAACGGC GCCGAACTGCTACCTTGTTTCTTAACCTTGAATTTTAAATATGGCGATATGAACATTTTTCATCGTCATGTGGATAACGC GGGCAATGGTAAAGTCTTGTTCTCTATTGCTAACATGCTGAAACCTGGCGTGTTTGATCCCGACAACATGGAGCAGTTCA GTACCCAAGGTGTGGTGTTTTTCATGACGTTACCTTGCTACGGCGATGCCTTAATGAACTTCTCGATTATGCTTAACTCT GCGCGCCAACTCGCTGAGGAGATCGATGCCGTGGTGCTCGACGGTCAACGTCTGCCTTGGGGTGAGTTTACTAAGCAAGA TTATTTACACCGCATTCGCGCTAACGCTTAG
Upstream 100 bases:
>100_bases CTATGCACGAGCCCGGTGTGTCTCGTATAGTCGCGGTAGACATAGAGCAAGCGGTGGCGATGGCTGACGCTGGATAACTA GAACAAAGACAGGGTAACCA
Downstream 100 bases:
>100_bases CCGACGCCGCAATTTGGCGGTTTATATATTGATGAGGCCGCTAATTGCGGCCTCATTTTTTGTGATCTACTTTTTGTGAT CTAAAGCATTCTGGATAAAG
Product: cell division protein ZipA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MEDLQLVLFVLGAIAIVAVLVHGFWSIRRQQPKSLKDSPMGNFYKKQAEKGESIPKRIDAEGFDADGIGAVRVRKAGELA PNNETPTANPYLKQEVKLETKPQELTSPEFKAELKQGLKPELKVEAKHEPIPAQPDFSLQPPVAKEQHRGPKVSRQEPVL GTQVPQMGQSHAAIVAQKAAEQEQALRAAPQQSALFEENEHQADHQEEAFVEQAAEDELGEPRDVLVLHVVAKDGQQLNG AELLPCFLTLNFKYGDMNIFHRHVDNAGNGKVLFSIANMLKPGVFDPDNMEQFSTQGVVFFMTLPCYGDALMNFSIMLNS ARQLAEEIDAVVLDGQRLPWGEFTKQDYLHRIRANA
Sequences:
>Translated_356_residues MEDLQLVLFVLGAIAIVAVLVHGFWSIRRQQPKSLKDSPMGNFYKKQAEKGESIPKRIDAEGFDADGIGAVRVRKAGELA PNNETPTANPYLKQEVKLETKPQELTSPEFKAELKQGLKPELKVEAKHEPIPAQPDFSLQPPVAKEQHRGPKVSRQEPVL GTQVPQMGQSHAAIVAQKAAEQEQALRAAPQQSALFEENEHQADHQEEAFVEQAAEDELGEPRDVLVLHVVAKDGQQLNG AELLPCFLTLNFKYGDMNIFHRHVDNAGNGKVLFSIANMLKPGVFDPDNMEQFSTQGVVFFMTLPCYGDALMNFSIMLNS ARQLAEEIDAVVLDGQRLPWGEFTKQDYLHRIRANA >Mature_356_residues MEDLQLVLFVLGAIAIVAVLVHGFWSIRRQQPKSLKDSPMGNFYKKQAEKGESIPKRIDAEGFDADGIGAVRVRKAGELA PNNETPTANPYLKQEVKLETKPQELTSPEFKAELKQGLKPELKVEAKHEPIPAQPDFSLQPPVAKEQHRGPKVSRQEPVL GTQVPQMGQSHAAIVAQKAAEQEQALRAAPQQSALFEENEHQADHQEEAFVEQAAEDELGEPRDVLVLHVVAKDGQQLNG AELLPCFLTLNFKYGDMNIFHRHVDNAGNGKVLFSIANMLKPGVFDPDNMEQFSTQGVVFFMTLPCYGDALMNFSIMLNS ARQLAEEIDAVVLDGQRLPWGEFTKQDYLHRIRANA
Specific function: Interacts directly with the cell division protein FtsZ. Probable receptor for the septal ring structure, may anchor it to the inner-membrane
COG id: COG3115
COG function: function code D; Cell division protein
Gene ontology:
Cell location: Cell inner membrane; Single-pass type I membrane protein
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ZipA family
Homologues:
Organism=Escherichia coli, GI1788752, Length=342, Percent_Identity=34.7953216374269, Blast_Score=153, Evalue=2e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ZIPA_SHEB8 (A6WPS6)
Other databases:
- EMBL: CP000753 - RefSeq: YP_001366878.1 - ProteinModelPortal: A6WPS6 - SMR: A6WPS6 - STRING: A6WPS6 - GeneID: 5372646 - GenomeReviews: CP000753_GR - KEGG: sbm:Shew185_2680 - eggNOG: COG3115 - HOGENOM: HBG742546 - OMA: QSHAAMV - ProtClustDB: CLSK906921 - BioCyc: SBAL402882:SHEW185_2680-MONOMER - HAMAP: MF_00509 - InterPro: IPR011919 - InterPro: IPR007449 - Gene3D: G3DSA:3.30.1400.10 - ProDom: PD035754 - SMART: SM00771 - TIGRFAMs: TIGR02205
Pfam domain/function: PF04354 ZipA_C; SSF64383 ZipA_Fts_Z_bd_C
EC number: NA
Molecular weight: Translated: 39590; Mature: 39590
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1a8d2e24)-;
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDLQLVLFVLGAIAIVAVLVHGFWSIRRQQPKSLKDSPMGNFYKKQAEKGESIPKRIDA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHCCC EGFDADGIGAVRVRKAGELAPNNETPTANPYLKQEVKLETKPQELTSPEFKAELKQGLKP CCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHCCHHHHHHHHHCCCC ELKVEAKHEPIPAQPDFSLQPPVAKEQHRGPKVSRQEPVLGTQVPQMGQSHAAIVAQKAA CEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH EQEQALRAAPQQSALFEENEHQADHQEEAFVEQAAEDELGEPRDVLVLHVVAKDGQQLNG HHHHHHHHCCHHHHHHCCCHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCC AELLPCFLTLNFKYGDMNIFHRHVDNAGNGKVLFSIANMLKPGVFDPDNMEQFSTQGVVF CCEEEEEEEEEEEECCHHHHHHHCCCCCCCEEHHEEHHHHCCCCCCCCCHHHHCCCCEEE FMTLPCYGDALMNFSIMLNSARQLAEEIDAVVLDGQRLPWGEFTKQDYLHRIRANA EEECCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHCCH >Mature Secondary Structure MEDLQLVLFVLGAIAIVAVLVHGFWSIRRQQPKSLKDSPMGNFYKKQAEKGESIPKRIDA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHCCC EGFDADGIGAVRVRKAGELAPNNETPTANPYLKQEVKLETKPQELTSPEFKAELKQGLKP CCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHCCHHHHHHHHHCCCC ELKVEAKHEPIPAQPDFSLQPPVAKEQHRGPKVSRQEPVLGTQVPQMGQSHAAIVAQKAA CEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH EQEQALRAAPQQSALFEENEHQADHQEEAFVEQAAEDELGEPRDVLVLHVVAKDGQQLNG HHHHHHHHCCHHHHHHCCCHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCC AELLPCFLTLNFKYGDMNIFHRHVDNAGNGKVLFSIANMLKPGVFDPDNMEQFSTQGVVF CCEEEEEEEEEEEECCHHHHHHHCCCCCCCEEHHEEHHHHCCCCCCCCCHHHHCCCCEEE FMTLPCYGDALMNFSIMLNSARQLAEEIDAVVLDGQRLPWGEFTKQDYLHRIRANA EEECCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA