| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is fabH2 [H]
Identifier: 160875859
GI number: 160875859
Start: 3267384
End: 3268451
Strand: Direct
Name: fabH2 [H]
Synonym: Sbal195_2748
Alternate gene names: 160875859
Gene position: 3267384-3268451 (Clockwise)
Preceding gene: 160875858
Following gene: 160875872
Centisome position: 61.1
GC content: 48.5
Gene sequence:
>1068_bases ATGCAGTACGCCACTATCACAGGTTGGGGCAAATGTGTTCCACCAGCCACTCTGACCAACGATGATCTTGCGACCTTTAT CGAGACATCCGACGAATGGATTAAATCTCGCACCGGCATCAGCCAGCGCCATATCAGTCATGTTAACACCTCTGAACTCG CTTCAGTTGCAGCACAACGCGCGCTCGCAGCTGCGGGTATCGATGGCAGTGAAATCGACATGATCATTCTGGCTAGCGCC AGCCCAGACACTTTGATCCCGAATATCGCATCAACTGTACAAGCTAATATTGGCGCCAGTTGTGCCGCGTTCGACATCAA TGCTGCCTGCAGTGGCTTTTTATATGGCTTAGGTTTAGCCAGCTCACAAATCAAGAGTGGTCAGAGCAAGAAAGTATTGG TGATTGGTGCCGAGCGTCTCTCTTTCTATTTAGATTGGTCACGCCGCGAAACTGCCGTGTTATTCGGTGATGGCGCTGGT GCCGTTGTCGTTGAAGCAACAGATGTTGCCGGTGGCGTGCTTGGTTATGAACTGAATAACGATCCTGAAGGTCGTGACAT TCTTAAAGCGGGCTTTGGCACGGCGATGGACAGATTCTCTGCCGAGTCATTGGATTTCTTTATTGAATTCGATGGCCAAG AAATCTTCAAACGCGCGATTAACGGCATGAACAAGTTAAGCACTAAAGTGCTTGAAAAATGTGGCGTTGATAAAGATGAA GTGGATCTAGTGATCCCGCATCAAGCCAACGAGCGCATTATCGATACCTTAGTCAGTCGGATGAAAATTCCGAAAGAAAA AGCCTTCGTTAACATTGCCAATTATGGCAATACCTCGGCAGCAACCATTCCAATTGCGATTTGTGATGCGTTAGAGCAAG GCGTGATCAAGCCGAATCAAACCATACTCTCTTGTGCCTTTGGTGCGGGCTTAACCTCTGCCGCACTCTTGCTGCAATGG GGCGATCGCGTGACGCCTATCAATATCAGTGATGCCGAGTTACCGCCTTGCGATAAAACGGGCATAGAGTTAGTTAAACG CGCTGTGGATTATTTTTGTAAGCCGTAA
Upstream 100 bases:
>100_bases GTGGTCTAGATCACGGACGGCCATTAGAGTTGCCGATAAGCTTTGTTGTCGATTCAAGGCAGCGCTCAGGTTCTGCCTTT TTTATTTGAGAGAAACCACC
Downstream 100 bases:
>100_bases ACGGTTTCTGCAAAACGATAATATCGTGTTTTACTAAAACAAAAAGCCATCTTAATCGATGGCTTTTTTAGTTTATGACG ACAGATCTTATTCATTCAGC
Product: 3-oxoacyl-(acyl carrier protein) synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III protein 2; Beta-ketoacyl-ACP synthase III 2; KAS III 2 [H]
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MQYATITGWGKCVPPATLTNDDLATFIETSDEWIKSRTGISQRHISHVNTSELASVAAQRALAAAGIDGSEIDMIILASA SPDTLIPNIASTVQANIGASCAAFDINAACSGFLYGLGLASSQIKSGQSKKVLVIGAERLSFYLDWSRRETAVLFGDGAG AVVVEATDVAGGVLGYELNNDPEGRDILKAGFGTAMDRFSAESLDFFIEFDGQEIFKRAINGMNKLSTKVLEKCGVDKDE VDLVIPHQANERIIDTLVSRMKIPKEKAFVNIANYGNTSAATIPIAICDALEQGVIKPNQTILSCAFGAGLTSAALLLQW GDRVTPINISDAELPPCDKTGIELVKRAVDYFCKP
Sequences:
>Translated_355_residues MQYATITGWGKCVPPATLTNDDLATFIETSDEWIKSRTGISQRHISHVNTSELASVAAQRALAAAGIDGSEIDMIILASA SPDTLIPNIASTVQANIGASCAAFDINAACSGFLYGLGLASSQIKSGQSKKVLVIGAERLSFYLDWSRRETAVLFGDGAG AVVVEATDVAGGVLGYELNNDPEGRDILKAGFGTAMDRFSAESLDFFIEFDGQEIFKRAINGMNKLSTKVLEKCGVDKDE VDLVIPHQANERIIDTLVSRMKIPKEKAFVNIANYGNTSAATIPIAICDALEQGVIKPNQTILSCAFGAGLTSAALLLQW GDRVTPINISDAELPPCDKTGIELVKRAVDYFCKP >Mature_355_residues MQYATITGWGKCVPPATLTNDDLATFIETSDEWIKSRTGISQRHISHVNTSELASVAAQRALAAAGIDGSEIDMIILASA SPDTLIPNIASTVQANIGASCAAFDINAACSGFLYGLGLASSQIKSGQSKKVLVIGAERLSFYLDWSRRETAVLFGDGAG AVVVEATDVAGGVLGYELNNDPEGRDILKAGFGTAMDRFSAESLDFFIEFDGQEIFKRAINGMNKLSTKVLEKCGVDKDE VDLVIPHQANERIIDTLVSRMKIPKEKAFVNIANYGNTSAATIPIAICDALEQGVIKPNQTILSCAFGAGLTSAALLLQW GDRVTPINISDAELPPCDKTGIELVKRAVDYFCKP
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
Organism=Escherichia coli, GI1787333, Length=321, Percent_Identity=36.1370716510903, Blast_Score=202, Evalue=3e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.180 [H]
Molecular weight: Translated: 37813; Mature: 37813
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYATITGWGKCVPPATLTNDDLATFIETSDEWIKSRTGISQRHISHVNTSELASVAAQR CCEEEECCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHCCCCHHHHHCCCHHHHHHHHHHH ALAAAGIDGSEIDMIILASASPDTLIPNIASTVQANIGASCAAFDINAACSGFLYGLGLA HHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEECHHHHHHHHHHHCCC SSQIKSGQSKKVLVIGAERLSFYLDWSRRETAVLFGDGAGAVVVEATDVAGGVLGYELNN HHHHCCCCCCEEEEEEHHHEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCEEEEECCC DPEGRDILKAGFGTAMDRFSAESLDFFIEFDGQEIFKRAINGMNKLSTKVLEKCGVDKDE CCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHCCHHHHHHHHHHHHCCCCCC VDLVIPHQANERIIDTLVSRMKIPKEKAFVNIANYGNTSAATIPIAICDALEQGVIKPNQ EEEECCCCCCHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCEEHHHHHHHHHHCCCCCCC TILSCAFGAGLTSAALLLQWGDRVTPINISDAELPPCDKTGIELVKRAVDYFCKP CEEEEHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQYATITGWGKCVPPATLTNDDLATFIETSDEWIKSRTGISQRHISHVNTSELASVAAQR CCEEEECCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHCCCCHHHHHCCCHHHHHHHHHHH ALAAAGIDGSEIDMIILASASPDTLIPNIASTVQANIGASCAAFDINAACSGFLYGLGLA HHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEECHHHHHHHHHHHCCC SSQIKSGQSKKVLVIGAERLSFYLDWSRRETAVLFGDGAGAVVVEATDVAGGVLGYELNN HHHHCCCCCCEEEEEEHHHEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCEEEEECCC DPEGRDILKAGFGTAMDRFSAESLDFFIEFDGQEIFKRAINGMNKLSTKVLEKCGVDKDE CCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHCCHHHHHHHHHHHHCCCCCC VDLVIPHQANERIIDTLVSRMKIPKEKAFVNIANYGNTSAATIPIAICDALEQGVIKPNQ EEEECCCCCCHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCEEHHHHHHHHHHCCCCCCC TILSCAFGAGLTSAALLLQWGDRVTPINISDAELPPCDKTGIELVKRAVDYFCKP CEEEEHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]