| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875851
Identifier: 160875851
GI number: 160875851
Start: 3251218
End: 3251694
Strand: Direct
Name: 160875851
Synonym: Sbal195_2740
Alternate gene names: NA
Gene position: 3251218-3251694 (Clockwise)
Preceding gene: 160875850
Following gene: 160875852
Centisome position: 60.8
GC content: 35.01
Gene sequence:
>477_bases ATGTCAGATAATTTTTTTGAGAAACATGACTTATCTATCGGCGTGTTTGTCGCTGGTATTGCAGTAATCATGTTCCTTAT GTTTGGTGCGGGTGCTATCGGCCCTTTACTTTTTCATACTATTGAAACGCTATTCGGTAAATTAACACACGAAGAGTTTG GTATCCTTTTCGCATCAAGTATAGTGATCATGACCCTGAGTATTGTTATACCAAACGTATTAATTATACGAGGTAGACCT CGAGCAGTTAAAATCAATAAAATAAACGTCTATTTTCAACTCATTTGTTACTTACTGTTTTTATTAGTACTTGAACACAA ACAAACCTGGATTTTTCTCTGCTTTGTTATTTTTCCGTTATTAGCGAACTGGTTAATGTCGTCTGCTAAATATCTAACCT TCCTTGCCTTTTACGAAACTCTACGCAAGGATCCAATCGTGTTTAGACAAAGCTTAGCAAAACGAATATTTAAGTAA
Upstream 100 bases:
>100_bases GTAAAGATACAGTAAGTACCAGCTTTAGCCTTAGCAATAAGGCGCACCGGTGGAAAAATCAACAACCTAACAATAGTCAG CTATAAGGAATTCAGAGTCT
Downstream 100 bases:
>100_bases GCACAGTAAATACAAGCTCTATTATCTGATATTAGTTTAGGTATGTTTATCATTATAAAACATTAACAACACGCCATAAT ATAACCCAAAAAAGATAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MSDNFFEKHDLSIGVFVAGIAVIMFLMFGAGAIGPLLFHTIETLFGKLTHEEFGILFASSIVIMTLSIVIPNVLIIRGRP RAVKINKINVYFQLICYLLFLLVLEHKQTWIFLCFVIFPLLANWLMSSAKYLTFLAFYETLRKDPIVFRQSLAKRIFK
Sequences:
>Translated_158_residues MSDNFFEKHDLSIGVFVAGIAVIMFLMFGAGAIGPLLFHTIETLFGKLTHEEFGILFASSIVIMTLSIVIPNVLIIRGRP RAVKINKINVYFQLICYLLFLLVLEHKQTWIFLCFVIFPLLANWLMSSAKYLTFLAFYETLRKDPIVFRQSLAKRIFK >Mature_157_residues SDNFFEKHDLSIGVFVAGIAVIMFLMFGAGAIGPLLFHTIETLFGKLTHEEFGILFASSIVIMTLSIVIPNVLIIRGRPR AVKINKINVYFQLICYLLFLLVLEHKQTWIFLCFVIFPLLANWLMSSAKYLTFLAFYETLRKDPIVFRQSLAKRIFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18169; Mature: 18038
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDNFFEKHDLSIGVFVAGIAVIMFLMFGAGAIGPLLFHTIETLFGKLTHEEFGILFASS CCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVIMTLSIVIPNVLIIRGRPRAVKINKINVYFQLICYLLFLLVLEHKQTWIFLCFVIFPL HHHHHHHHHHCCEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LANWLMSSAKYLTFLAFYETLRKDPIVFRQSLAKRIFK HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure SDNFFEKHDLSIGVFVAGIAVIMFLMFGAGAIGPLLFHTIETLFGKLTHEEFGILFASS CCCCCHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVIMTLSIVIPNVLIIRGRPRAVKINKINVYFQLICYLLFLLVLEHKQTWIFLCFVIFPL HHHHHHHHHHCCEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LANWLMSSAKYLTFLAFYETLRKDPIVFRQSLAKRIFK HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA