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The map label for this gene is yccF [H]

Identifier: 160875828

GI number: 160875828

Start: 3223082

End: 3223489

Strand: Direct

Name: yccF [H]

Synonym: Sbal195_2716

Alternate gene names: 160875828

Gene position: 3223082-3223489 (Clockwise)

Preceding gene: 160875826

Following gene: 160875832

Centisome position: 60.28

GC content: 47.55

Gene sequence:

>408_bases
ATGGCAGTATTACGCTTAATATTCAACATCGCTTGGTTTGTGCTCGGTGGATTTGTGATGGGACTCGCTTGGTGGCTCGC
TGGTATCCTGTGTTTTATCAGCATTATTGGTATTCCCTTTGGCCGCGCCTGCTTTGTTATCGGTGAAATGACCTTCTGGC
CCTTTGGTCAAGAACAAATCAGCCGTCGTCACTTAACCGGACGTGACGATTTAGGCACAGGTGCCCTAGGCATGGTGGGA
AATATTATTTGGTTCTTGCTGTTTGGGATCTGGTTAGCCATAGGCCACCTGGTCCATGCCTTAGCCTGTTTTGTGACTAT
TATCGGTATTCCCTTTGGAATACAGCATCTTAAACTGGCGTTACTCAGCCTAACACCGATAGGCCAAACCGTTGTGGCTA
AAGCCTAA

Upstream 100 bases:

>100_bases
GTTTCTCGCTTAGTCATTGGCATATATTCAGTTTATCAAAGCTAACGGCATTCATTACAGCTAACGATAAAGGCTAAAAA
AGTAACATAAGGAGTTTTCA

Downstream 100 bases:

>100_bases
TCGATTATGAGTTAACCGTCTTAGCGCTGTTCATTGCCGATGATTTACTGTGGAGAGTGGATAGCGCTTTTTCATCCCAT
ACTGAAAATATCGCCTCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MAVLRLIFNIAWFVLGGFVMGLAWWLAGILCFISIIGIPFGRACFVIGEMTFWPFGQEQISRRHLTGRDDLGTGALGMVG
NIIWFLLFGIWLAIGHLVHALACFVTIIGIPFGIQHLKLALLSLTPIGQTVVAKA

Sequences:

>Translated_135_residues
MAVLRLIFNIAWFVLGGFVMGLAWWLAGILCFISIIGIPFGRACFVIGEMTFWPFGQEQISRRHLTGRDDLGTGALGMVG
NIIWFLLFGIWLAIGHLVHALACFVTIIGIPFGIQHLKLALLSLTPIGQTVVAKA
>Mature_134_residues
AVLRLIFNIAWFVLGGFVMGLAWWLAGILCFISIIGIPFGRACFVIGEMTFWPFGQEQISRRHLTGRDDLGTGALGMVGN
IIWFLLFGIWLAIGHLVHALACFVTIIGIPFGIQHLKLALLSLTPIGQTVVAKA

Specific function: Unknown

COG id: COG3304

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787195, Length=133, Percent_Identity=39.0977443609023, Blast_Score=88, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005185 [H]

Pfam domain/function: PF03733 DUF307 [H]

EC number: NA

Molecular weight: Translated: 14766; Mature: 14635

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVLRLIFNIAWFVLGGFVMGLAWWLAGILCFISIIGIPFGRACFVIGEMTFWPFGQEQI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHH
SRRHLTGRDDLGTGALGMVGNIIWFLLFGIWLAIGHLVHALACFVTIIGIPFGIQHLKLA
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LLSLTPIGQTVVAKA
HHHHCCCCHHHHCCC
>Mature Secondary Structure 
AVLRLIFNIAWFVLGGFVMGLAWWLAGILCFISIIGIPFGRACFVIGEMTFWPFGQEQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHH
SRRHLTGRDDLGTGALGMVGNIIWFLLFGIWLAIGHLVHALACFVTIIGIPFGIQHLKLA
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LLSLTPIGQTVVAKA
HHHHCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 2542273; 7984428 [H]