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The map label for this gene is chrR [H]

Identifier: 160875824

GI number: 160875824

Start: 3219413

End: 3220144

Strand: Direct

Name: chrR [H]

Synonym: Sbal195_2712

Alternate gene names: 160875824

Gene position: 3219413-3220144 (Clockwise)

Preceding gene: 160875823

Following gene: 160875825

Centisome position: 60.21

GC content: 47.27

Gene sequence:

>732_bases
ATGATTAAGCATCATCCCCAACAAGATTTACTCGTGAGCCATGCGAATGGGGTCTTACCTTTATCGATGGCCATCGCGGT
ATCAGCACATTGCGCATTGTGTGAGACGTGTCGTGAGCAACTAGCCCTGTTAACCGAGCAAGCTGCCAATTCGGCATTAA
ATCCAGATGGCGCTCATGCTCATGCTGCAAAGCATCATATAGACCAAGAGTCGATTCACACTGCGCATATTGATACTGGA
AACACTCAAGCGACTAATGTACCAGTGATGGATATTGACGCTATGCTGGCGCAAATCATGGCCCAGCCTGCGGCAACGGA
TGTGCCTAATAATGCTCCTCTGGATGTTCAAGTAAAACAACAGCATTACACAGTGCCGTCGGTGTTTCGCCAGCATTTGG
CCCGTCCTTGGCAAATCTTAGGCAAAGTCAGTCGTATGCGTTTTGATGTCGATGAAATGAACACCCGCGCGAGCTTGTTA
CACATAGATGCGCAAGGTGAAATCCCCCAACATACCCATAAGGGCTATGAGTTAACCCTATTGTTAGCGGGAGCGTTTTC
GGATATTAACGGTGACTATGTGCCAGGTGATTTTATTGTGCTCGATAGCCAACATCACCACTCACCTAAAACCGTTGACG
GTTGCTTATGCTACACAGTGTTAGATGCGCCGCTGCATTTTACCAAAGGCCTAAGCAAGTTGCTTAACCCCATAGGTGAA
CTGATTTATTAA

Upstream 100 bases:

>100_bases
CAACAAGAGCTAGCCGATGCCCTCAAGGTGCCAATAGGCACCATAAAGTCACGATTAAGACTCGGGCTAGAAAAGTTGAA
AAGTTTCTTGGAGACACACA

Downstream 100 bases:

>100_bases
GCCTGTAGCCAGTGCTTTAACATGACTTATTTACTCCGTTTTAAAATGAGTCCGCTGCTAAATTTTCAATTACTGAATCT
TCAGTTACTAAATTTTCAGT

Product: anti-ECF sigma factor ChrR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MIKHHPQQDLLVSHANGVLPLSMAIAVSAHCALCETCREQLALLTEQAANSALNPDGAHAHAAKHHIDQESIHTAHIDTG
NTQATNVPVMDIDAMLAQIMAQPAATDVPNNAPLDVQVKQQHYTVPSVFRQHLARPWQILGKVSRMRFDVDEMNTRASLL
HIDAQGEIPQHTHKGYELTLLLAGAFSDINGDYVPGDFIVLDSQHHHSPKTVDGCLCYTVLDAPLHFTKGLSKLLNPIGE
LIY

Sequences:

>Translated_243_residues
MIKHHPQQDLLVSHANGVLPLSMAIAVSAHCALCETCREQLALLTEQAANSALNPDGAHAHAAKHHIDQESIHTAHIDTG
NTQATNVPVMDIDAMLAQIMAQPAATDVPNNAPLDVQVKQQHYTVPSVFRQHLARPWQILGKVSRMRFDVDEMNTRASLL
HIDAQGEIPQHTHKGYELTLLLAGAFSDINGDYVPGDFIVLDSQHHHSPKTVDGCLCYTVLDAPLHFTKGLSKLLNPIGE
LIY
>Mature_243_residues
MIKHHPQQDLLVSHANGVLPLSMAIAVSAHCALCETCREQLALLTEQAANSALNPDGAHAHAAKHHIDQESIHTAHIDTG
NTQATNVPVMDIDAMLAQIMAQPAATDVPNNAPLDVQVKQQHYTVPSVFRQHLARPWQILGKVSRMRFDVDEMNTRASLL
HIDAQGEIPQHTHKGYELTLLLAGAFSDINGDYVPGDFIVLDSQHHHSPKTVDGCLCYTVLDAPLHFTKGLSKLLNPIGE
LIY

Specific function: Anti-sigma factor that inhibits the activity of the extracytoplasmic function (ECF) sigma (E) factor, thereby indirectly regulating the transcription of the cycA and rpoE genes [H]

COG id: COG3806

COG function: function code T; Anti-sigma factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012807
- InterPro:   IPR011051
- InterPro:   IPR014710 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26589; Mature: 26589

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKHHPQQDLLVSHANGVLPLSMAIAVSAHCALCETCREQLALLTEQAANSALNPDGAHA
CCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
HAAKHHIDQESIHTAHIDTGNTQATNVPVMDIDAMLAQIMAQPAATDVPNNAPLDVQVKQ
HHHHHHCCHHHCEEEECCCCCCCCCCCCEECHHHHHHHHHHCCCCCCCCCCCCCEEEECC
QHYTVPSVFRQHLARPWQILGKVSRMRFDVDEMNTRASLLHIDAQGEIPQHTHKGYELTL
CCCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCCEEEEEEECCCCCCCCCCCCEEEEE
LLAGAFSDINGDYVPGDFIVLDSQHHHSPKTVDGCLCYTVLDAPLHFTKGLSKLLNPIGE
EEEECCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
LIY
HCC
>Mature Secondary Structure
MIKHHPQQDLLVSHANGVLPLSMAIAVSAHCALCETCREQLALLTEQAANSALNPDGAHA
CCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
HAAKHHIDQESIHTAHIDTGNTQATNVPVMDIDAMLAQIMAQPAATDVPNNAPLDVQVKQ
HHHHHHCCHHHCEEEECCCCCCCCCCCCEECHHHHHHHHHHCCCCCCCCCCCCCEEEECC
QHYTVPSVFRQHLARPWQILGKVSRMRFDVDEMNTRASLLHIDAQGEIPQHTHKGYELTL
CCCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCCEEEEEEECCCCCCCCCCCCEEEEE
LLAGAFSDINGDYVPGDFIVLDSQHHHSPKTVDGCLCYTVLDAPLHFTKGLSKLLNPIGE
EEEECCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
LIY
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7721683 [H]