| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160875794
Identifier: 160875794
GI number: 160875794
Start: 3184511
End: 3186337
Strand: Reverse
Name: 160875794
Synonym: Sbal195_2682
Alternate gene names: NA
Gene position: 3186337-3184511 (Counterclockwise)
Preceding gene: 160875795
Following gene: 160875793
Centisome position: 59.59
GC content: 42.8
Gene sequence:
>1827_bases ATGAAGTTACAGTTGGATAAAGCCCTTTCCTTGGTTGCCTTAGGTGTCCTTGGTGTATTAAACAGTGCCCATGCTGCACC TGTCTATGAAATCGTTAATATCGATAGTTATGATCTGCAAGGTACGCTTGAAGGTACTCGTAACGGCTATGCTCTAGGCG TGAATGCCAATGATCAGTTAGTCGGTATCTCAAAGGGTAAGAAAAAGCTCAGTAGTTCAGATGTCGAAGGTGGCGTCATT GATGTTGCTGATGGTATCGCACCGGAAGAAACCATTACGTATTCGATAGAAAAAGCCATCATTGCCAATAACTTTGCCTT TGTTGCCGCGCAAAATGGTGCCGCGGGAGCCTGGTTACCGACATTCGACAGCATTAATGGTACTACACCCCCAAGTGATA CTGCTGTGATTAACTCTGTTGATACCTTTTATTACGGTATTAACGATGCAGGTATCAAAGTGGGTAGCATGACTGCGCCT GAAAAGAAAACAGAGAATACAGCAACTACTGATGTCGCTGATGATTATTGGTATTACCGCGACTATGAATATCGCGGTGT GGCCAAGTCCGGTGACACAGAGATCCCGCTCCCCCCTCCTTATACGCAATATGTTAAAGATGATAAAACGGTTGAGTTGG GCGGATGGTCAGCGGCAACCTCCATTAATAACAATAACTTAGCTGCAGGTTATGCCAGCACAGCTATCAGTAAATATGGT AGTGATAGAGTTAATTATTGTTTAGGTACGGATAATACCTTGCCGTTGGATATTTGTGTGCAACGTGAGCAATACCCAAA TAGTACAGGTACACGTAATATTCAGTATCAAACTCGTGCCTATGTATGGCAAATCGATAATGATACGGCTACAGGAACAG AGTTGCCTTTAGGATTAACGCCTGCGACTGACAATACCTTGACCTTTACCGCTCAAGCACTTGGCTTGAATAACAATGGT GTCGTTGTTGGTCGTTCGCATGTTTATCGTAATAACAACACTGATAAGCTGCGTCAAGATGCAGCTTATTGGTCTAAAGA TACTGAAGGTAAATACCAATACCACTGGATCCCTATGGGTGATTCGATTTCAAGCTCTATCGCCTATGATATTAACGACA GTGGGATTCTTGTTGGTAGCTATCGCAGCTATATCCAAGGTTACTTACGTGATAAATTTTTCGTCTTTGATACCAATACC CCGGAAGTTGCCTATGTGACCCCGAATGATTTTGCTTCAACGACAACGGATCTTTCGAGTAAGCCAAAAGATATTAACAA TAAAGGTCAAGTTGTTGGTTATATTGAGACAACATACGATAAAGAGAAGCCACGTCCTAAAGCGGGTTTCCTATATGAGA AATCAACCGGTGAGTTTAACAATCTTAATAAGTTGTTGACCTGTGAGTCTAAGGGTTATGAAAAAGCCAGTGATGGTAGC TGGGCACGTCATCAAGTCGAAGTTCAAGATGGCTCGGGTAAAATCCTTCAATATAACGCCGATATTTTAGTGGTTGAAGG TTCGAGTATTAATGAAGATGGCACTATTGTAGGGACGGCGTTTATCCGTAAACCTTCTTATCAATTTGATAAAGATGGCA ACATAGTGATTGGTGAAAATGGTTTACCTTTATTTGAGTTGAGTGGCAGTGGCGATCCAGTGACTGCCTATATCCCGCGT ATGGTCGTGCTTAAACCTGCTAGCAGTGGTGAGGCTTGCACCGTTGAGGATAATACTGATACGGGTAATTTTGAGCGTTC TGGTGCTGCAACCTTAGCTTGGTTATTTGCTTTACCATTAGTGTGGTTCCGTCGTCGAATTCGCTAA
Upstream 100 bases:
>100_bases CAGTTGGCGGATAAAGAAAAGCAATTGGAAGTTTGCTTCGAGCGATGGGAAGAGCTTGAGTCACTGAAGTAAACCAATAA TAAAAATGGGAATAGAATTA
Downstream 100 bases:
>100_bases GTTTTAAGCTTGAATTCAGACTAAAAAAATCGAGGCTAAATGCCTCGATTTTTTTTCGCTAGGATCTCAATAGTTTAATA AATAGTCAGTATAATAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 608; Mature: 608
Protein sequence:
>608_residues MKLQLDKALSLVALGVLGVLNSAHAAPVYEIVNIDSYDLQGTLEGTRNGYALGVNANDQLVGISKGKKKLSSSDVEGGVI DVADGIAPEETITYSIEKAIIANNFAFVAAQNGAAGAWLPTFDSINGTTPPSDTAVINSVDTFYYGINDAGIKVGSMTAP EKKTENTATTDVADDYWYYRDYEYRGVAKSGDTEIPLPPPYTQYVKDDKTVELGGWSAATSINNNNLAAGYASTAISKYG SDRVNYCLGTDNTLPLDICVQREQYPNSTGTRNIQYQTRAYVWQIDNDTATGTELPLGLTPATDNTLTFTAQALGLNNNG VVVGRSHVYRNNNTDKLRQDAAYWSKDTEGKYQYHWIPMGDSISSSIAYDINDSGILVGSYRSYIQGYLRDKFFVFDTNT PEVAYVTPNDFASTTTDLSSKPKDINNKGQVVGYIETTYDKEKPRPKAGFLYEKSTGEFNNLNKLLTCESKGYEKASDGS WARHQVEVQDGSGKILQYNADILVVEGSSINEDGTIVGTAFIRKPSYQFDKDGNIVIGENGLPLFELSGSGDPVTAYIPR MVVLKPASSGEACTVEDNTDTGNFERSGAATLAWLFALPLVWFRRRIR
Sequences:
>Translated_608_residues MKLQLDKALSLVALGVLGVLNSAHAAPVYEIVNIDSYDLQGTLEGTRNGYALGVNANDQLVGISKGKKKLSSSDVEGGVI DVADGIAPEETITYSIEKAIIANNFAFVAAQNGAAGAWLPTFDSINGTTPPSDTAVINSVDTFYYGINDAGIKVGSMTAP EKKTENTATTDVADDYWYYRDYEYRGVAKSGDTEIPLPPPYTQYVKDDKTVELGGWSAATSINNNNLAAGYASTAISKYG SDRVNYCLGTDNTLPLDICVQREQYPNSTGTRNIQYQTRAYVWQIDNDTATGTELPLGLTPATDNTLTFTAQALGLNNNG VVVGRSHVYRNNNTDKLRQDAAYWSKDTEGKYQYHWIPMGDSISSSIAYDINDSGILVGSYRSYIQGYLRDKFFVFDTNT PEVAYVTPNDFASTTTDLSSKPKDINNKGQVVGYIETTYDKEKPRPKAGFLYEKSTGEFNNLNKLLTCESKGYEKASDGS WARHQVEVQDGSGKILQYNADILVVEGSSINEDGTIVGTAFIRKPSYQFDKDGNIVIGENGLPLFELSGSGDPVTAYIPR MVVLKPASSGEACTVEDNTDTGNFERSGAATLAWLFALPLVWFRRRIR >Mature_608_residues MKLQLDKALSLVALGVLGVLNSAHAAPVYEIVNIDSYDLQGTLEGTRNGYALGVNANDQLVGISKGKKKLSSSDVEGGVI DVADGIAPEETITYSIEKAIIANNFAFVAAQNGAAGAWLPTFDSINGTTPPSDTAVINSVDTFYYGINDAGIKVGSMTAP EKKTENTATTDVADDYWYYRDYEYRGVAKSGDTEIPLPPPYTQYVKDDKTVELGGWSAATSINNNNLAAGYASTAISKYG SDRVNYCLGTDNTLPLDICVQREQYPNSTGTRNIQYQTRAYVWQIDNDTATGTELPLGLTPATDNTLTFTAQALGLNNNG VVVGRSHVYRNNNTDKLRQDAAYWSKDTEGKYQYHWIPMGDSISSSIAYDINDSGILVGSYRSYIQGYLRDKFFVFDTNT PEVAYVTPNDFASTTTDLSSKPKDINNKGQVVGYIETTYDKEKPRPKAGFLYEKSTGEFNNLNKLLTCESKGYEKASDGS WARHQVEVQDGSGKILQYNADILVVEGSSINEDGTIVGTAFIRKPSYQFDKDGNIVIGENGLPLFELSGSGDPVTAYIPR MVVLKPASSGEACTVEDNTDTGNFERSGAATLAWLFALPLVWFRRRIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66247; Mature: 66247
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLQLDKALSLVALGVLGVLNSAHAAPVYEIVNIDSYDLQGTLEGTRNGYALGVNANDQL CEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEECCCCCCEEEEECCCCCE VGISKGKKKLSSSDVEGGVIDVADGIAPEETITYSIEKAIIANNFAFVAAQNGAAGAWLP EEECCCCHHHCCCCCCCCEEEECCCCCCCCEEEEEEEEEEEECCEEEEEECCCCCCCCCC TFDSINGTTPPSDTAVINSVDTFYYGINDAGIKVGSMTAPEKKTENTATTDVADDYWYYR CCCCCCCCCCCCCCEEEECCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEE DYEYRGVAKSGDTEIPLPPPYTQYVKDDKTVELGGWSAATSINNNNLAAGYASTAISKYG CEEEECCCCCCCCCCCCCCCHHHHCCCCCEEEECCCEEEEECCCCCEECCHHHHHHHHCC SDRVNYCLGTDNTLPLDICVQREQYPNSTGTRNIQYQTRAYVWQIDNDTATGTELPLGLT CCCEEEEECCCCCCEEEEEEECHHCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCEEEC PATDNTLTFTAQALGLNNNGVVVGRSHVYRNNNTDKLRQDAAYWSKDTEGKYQYHWIPMG CCCCCEEEEEEEEEECCCCCEEEECCEEEECCCHHHHHHHHHHCCCCCCCCEEEEEEECC DSISSSIAYDINDSGILVGSYRSYIQGYLRDKFFVFDTNTPEVAYVTPNDFASTTTDLSS CCCCCCEEEEECCCCEEEECHHHHHHHHHCCEEEEEECCCCEEEEECCCCCCCCCCCCCC KPKDINNKGQVVGYIETTYDKEKPRPKAGFLYEKSTGEFNNLNKLLTCESKGYEKASDGS CCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCC WARHQVEVQDGSGKILQYNADILVVEGSSINEDGTIVGTAFIRKPSYQFDKDGNIVIGEN CEEEEEEEECCCCCEEEECCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCEEECCC GLPLFELSGSGDPVTAYIPRMVVLKPASSGEACTVEDNTDTGNFERSGAATLAWLFALPL CCEEEEECCCCCCEEEECCEEEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHH VWFRRRIR HHHHHHCC >Mature Secondary Structure MKLQLDKALSLVALGVLGVLNSAHAAPVYEIVNIDSYDLQGTLEGTRNGYALGVNANDQL CEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEECCCCCCEEEEECCCCCE VGISKGKKKLSSSDVEGGVIDVADGIAPEETITYSIEKAIIANNFAFVAAQNGAAGAWLP EEECCCCHHHCCCCCCCCEEEECCCCCCCCEEEEEEEEEEEECCEEEEEECCCCCCCCCC TFDSINGTTPPSDTAVINSVDTFYYGINDAGIKVGSMTAPEKKTENTATTDVADDYWYYR CCCCCCCCCCCCCCEEEECCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEE DYEYRGVAKSGDTEIPLPPPYTQYVKDDKTVELGGWSAATSINNNNLAAGYASTAISKYG CEEEECCCCCCCCCCCCCCCHHHHCCCCCEEEECCCEEEEECCCCCEECCHHHHHHHHCC SDRVNYCLGTDNTLPLDICVQREQYPNSTGTRNIQYQTRAYVWQIDNDTATGTELPLGLT CCCEEEEECCCCCCEEEEEEECHHCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCEEEC PATDNTLTFTAQALGLNNNGVVVGRSHVYRNNNTDKLRQDAAYWSKDTEGKYQYHWIPMG CCCCCEEEEEEEEEECCCCCEEEECCEEEECCCHHHHHHHHHHCCCCCCCCEEEEEEECC DSISSSIAYDINDSGILVGSYRSYIQGYLRDKFFVFDTNTPEVAYVTPNDFASTTTDLSS CCCCCCEEEEECCCCEEEECHHHHHHHHHCCEEEEEECCCCEEEEECCCCCCCCCCCCCC KPKDINNKGQVVGYIETTYDKEKPRPKAGFLYEKSTGEFNNLNKLLTCESKGYEKASDGS CCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCC WARHQVEVQDGSGKILQYNADILVVEGSSINEDGTIVGTAFIRKPSYQFDKDGNIVIGEN CEEEEEEEECCCCCEEEECCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCEEECCC GLPLFELSGSGDPVTAYIPRMVVLKPASSGEACTVEDNTDTGNFERSGAATLAWLFALPL CCEEEEECCCCCCEEEECCEEEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHH VWFRRRIR HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA