| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875732
Identifier: 160875732
GI number: 160875732
Start: 3105578
End: 3106027
Strand: Reverse
Name: 160875732
Synonym: Sbal195_2620
Alternate gene names: NA
Gene position: 3106027-3105578 (Counterclockwise)
Preceding gene: 160875733
Following gene: 160875731
Centisome position: 58.09
GC content: 47.11
Gene sequence:
>450_bases ATGAGTGAGAAAATCGCGATAATTATGCGTGGTTTACCGGGCAGTGGTAAGTCACATTGGGTTGAAACTTATATTCTTTC CCTTCCTTTAGAACAAGCCATTGGCGTGCGCCAACGCGGCGTATTTTCGACCGATAGCTTTTTTTATCACCAAGATGAAT ACCGCTTCGATGCCAAGAAGTTGCCTGAGTACCATCAATGTAATTTGGCGGGGTTTATTCAGGCGCTGTCTTCAGGCGAG CCCGTGGTGATTTGCGACAACACTAATCTGTGCCGCTGGGAATACATGGCCTATGAAGCGGCGGCAAAAGCCTTAGGTTA TCAAGTCCGAACTATGCTGATAGGCGAACCGAGCAATCCTGCCCATCAGTTGGAATGCGCAAAACGTAATCGTCATGGCG TGCCTTTGGCGCAAATTCAACGTATGGCAAAGGTATTTGAGGATTTTTAA
Upstream 100 bases:
>100_bases GTCAGTTCCAGTATCATTTGACTGGCAAAGCGGGGGAGTTAGTGCCTCAGTTGGTCGAGACTATTTTAGCGGGCCGAGTG ATTGGCAGTGAGTCGAACAC
Downstream 100 bases:
>100_bases AATAAGGCGCTTAGTCATCATGAGTACTGTGACGCTTTTGTCGCAGTAAATCTGATTAGGCCCTTTACTTTACCTATGGC CTGCGATGTTTTCGTACTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MSEKIAIIMRGLPGSGKSHWVETYILSLPLEQAIGVRQRGVFSTDSFFYHQDEYRFDAKKLPEYHQCNLAGFIQALSSGE PVVICDNTNLCRWEYMAYEAAAKALGYQVRTMLIGEPSNPAHQLECAKRNRHGVPLAQIQRMAKVFEDF
Sequences:
>Translated_149_residues MSEKIAIIMRGLPGSGKSHWVETYILSLPLEQAIGVRQRGVFSTDSFFYHQDEYRFDAKKLPEYHQCNLAGFIQALSSGE PVVICDNTNLCRWEYMAYEAAAKALGYQVRTMLIGEPSNPAHQLECAKRNRHGVPLAQIQRMAKVFEDF >Mature_148_residues SEKIAIIMRGLPGSGKSHWVETYILSLPLEQAIGVRQRGVFSTDSFFYHQDEYRFDAKKLPEYHQCNLAGFIQALSSGEP VVICDNTNLCRWEYMAYEAAAKALGYQVRTMLIGEPSNPAHQLECAKRNRHGVPLAQIQRMAKVFEDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI7656971, Length=151, Percent_Identity=37.7483443708609, Blast_Score=86, Evalue=1e-17, Organism=Homo sapiens, GI119226224, Length=147, Percent_Identity=34.6938775510204, Blast_Score=73, Evalue=1e-13, Organism=Homo sapiens, GI31742492, Length=139, Percent_Identity=35.9712230215827, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI21357685, Length=146, Percent_Identity=34.9315068493151, Blast_Score=70, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16943; Mature: 16811
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKIAIIMRGLPGSGKSHWVETYILSLPLEQAIGVRQRGVFSTDSFFYHQDEYRFDAKK CCCCEEEEEECCCCCCCHHHHHHHHHHCCHHHHHCCHHCCCCCCCCEEEECCCCCCCHHH LPEYHQCNLAGFIQALSSGEPVVICDNTNLCRWEYMAYEAAAKALGYQVRTMLIGEPSNP CCCHHHCCHHHHHHHHCCCCCEEEECCCCCEEHHHHHHHHHHHHHHHEEEEEEEECCCCH AHQLECAKRNRHGVPLAQIQRMAKVFEDF HHHHHHHHCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SEKIAIIMRGLPGSGKSHWVETYILSLPLEQAIGVRQRGVFSTDSFFYHQDEYRFDAKK CCCEEEEEECCCCCCCHHHHHHHHHHCCHHHHHCCHHCCCCCCCCEEEECCCCCCCHHH LPEYHQCNLAGFIQALSSGEPVVICDNTNLCRWEYMAYEAAAKALGYQVRTMLIGEPSNP CCCHHHCCHHHHHHHHCCCCCEEEECCCCCEEHHHHHHHHHHHHHHHEEEEEEEECCCCH AHQLECAKRNRHGVPLAQIQRMAKVFEDF HHHHHHHHCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA