| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160875728
Identifier: 160875728
GI number: 160875728
Start: 3101507
End: 3102202
Strand: Reverse
Name: 160875728
Synonym: Sbal195_2616
Alternate gene names: NA
Gene position: 3102202-3101507 (Counterclockwise)
Preceding gene: 160875730
Following gene: 160875723
Centisome position: 58.01
GC content: 46.26
Gene sequence:
>696_bases ATGGACTTTATTGAAGTATACCCTAATGCGTTGCCGAATGACTTGTGCGACCGTCTCATTCTGGCATTTGAGCAACATGC TGGCGTTGTCGATGGACAAACGGGCAATGGCGTTGATCTGGAGAAGAAGATCAGCCGCGATTTGACCTTAGATAGTTTCG CCGACTTGCAGCCCCTCAGAAACGAACTCTTAGGTTATACCTTAAAGGGCGCGGTAGATTATTTCACAAAGTATTCAATG GCGTTAATGGGCGCGGTCGCTGTGTCTGTGAGTGATGAACAAGGACAACCTGTAACGCTAACCCCTGCTAATTTTGCGGC GCTGGGTGCACCTAGAGCCGATGGTTTAGTCAAGTATTTGTATCGCAGTGGCAGTATTAATGTTCAAAAGTATCAGCAGA ATAAAGGCGGTTATCCCCACTGGCATTCGGAGCAATTCCCGCAAAATGGTCACAATGAAGCCTTGCATCGCGTCGTGCTT TATATGTTTTATTTAAATGATGTGGAAGCGGGCGGTGAAACCGAATTTTATTATCAGCAGCGTAAAATTTCCCCGAAAAA AGGCACTATGGTGATAGCACCAGCGGGATTCACTCATACGCATAGGGGTAATAAACCTGTGAGTGGTGACAAATACATTG CCACCTCTTGGATCATGTTCAATCGAGCAGAGCAGTTATACGCTGTGATTGCCTGA
Upstream 100 bases:
>100_bases CCTGATGTGGGTTATTTTATCTCAATGATGCTGCTTTACAATTACTTAACTAACATGTCAGCATAGTAAGCCTAGAAAGT AGCCAATCCATTGAGGAAGT
Downstream 100 bases:
>100_bases TAAGTATGAGTATCCACATAGTTACACATCCTTGTTTTAACTATTTGTATTTGGTTATTTTGTATTTAGCTATCTTTGTT GTGAGCTATCCCTGTCCTTA
Product: prolyl 4-hydroxylase subunit alpha
Products: NA
Alternate protein names: Prolyl 4-Hydroxylase Alpha Subunit; Dioxygenase; Trypsin; Mannitol Dehydrogenase; 2OG-Fe(II) Oxygenase Family Oxidoreductase; 2og-Fe(Ii) Oxygenase; 2-Oxoglutarate-Fe(Ii) Oxygenase Family; 2OG-Fe(II) Oxygenase Superfamily; 2OG-Fe(II) Oxygenase Family Protein; 2-Oxoglutarate-Fe(II) Oxygenase Family Protein
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MDFIEVYPNALPNDLCDRLILAFEQHAGVVDGQTGNGVDLEKKISRDLTLDSFADLQPLRNELLGYTLKGAVDYFTKYSM ALMGAVAVSVSDEQGQPVTLTPANFAALGAPRADGLVKYLYRSGSINVQKYQQNKGGYPHWHSEQFPQNGHNEALHRVVL YMFYLNDVEAGGETEFYYQQRKISPKKGTMVIAPAGFTHTHRGNKPVSGDKYIATSWIMFNRAEQLYAVIA
Sequences:
>Translated_231_residues MDFIEVYPNALPNDLCDRLILAFEQHAGVVDGQTGNGVDLEKKISRDLTLDSFADLQPLRNELLGYTLKGAVDYFTKYSM ALMGAVAVSVSDEQGQPVTLTPANFAALGAPRADGLVKYLYRSGSINVQKYQQNKGGYPHWHSEQFPQNGHNEALHRVVL YMFYLNDVEAGGETEFYYQQRKISPKKGTMVIAPAGFTHTHRGNKPVSGDKYIATSWIMFNRAEQLYAVIA >Mature_231_residues MDFIEVYPNALPNDLCDRLILAFEQHAGVVDGQTGNGVDLEKKISRDLTLDSFADLQPLRNELLGYTLKGAVDYFTKYSM ALMGAVAVSVSDEQGQPVTLTPANFAALGAPRADGLVKYLYRSGSINVQKYQQNKGGYPHWHSEQFPQNGHNEALHRVVL YMFYLNDVEAGGETEFYYQQRKISPKKGTMVIAPAGFTHTHRGNKPVSGDKYIATSWIMFNRAEQLYAVIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25744; Mature: 25744
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFIEVYPNALPNDLCDRLILAFEQHAGVVDGQTGNGVDLEKKISRDLTLDSFADLQPLR CCHHHHCCCCCCHHHHHHHHHHHHHHCCEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHH NELLGYTLKGAVDYFTKYSMALMGAVAVSVSDEQGQPVTLTPANFAALGAPRADGLVKYL HHHHCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEECCCCHHHCCCCCHHHHHHHH YRSGSINVQKYQQNKGGYPHWHSEQFPQNGHNEALHRVVLYMFYLNDVEAGGETEFYYQQ HHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEHH RKISPKKGTMVIAPAGFTHTHRGNKPVSGDKYIATSWIMFNRAEQLYAVIA HCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHEECC >Mature Secondary Structure MDFIEVYPNALPNDLCDRLILAFEQHAGVVDGQTGNGVDLEKKISRDLTLDSFADLQPLR CCHHHHCCCCCCHHHHHHHHHHHHHHCCEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHH NELLGYTLKGAVDYFTKYSMALMGAVAVSVSDEQGQPVTLTPANFAALGAPRADGLVKYL HHHHCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEECCCCHHHCCCCCHHHHHHHH YRSGSINVQKYQQNKGGYPHWHSEQFPQNGHNEALHRVVLYMFYLNDVEAGGETEFYYQQ HHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEHH RKISPKKGTMVIAPAGFTHTHRGNKPVSGDKYIATSWIMFNRAEQLYAVIA HCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA