| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875711
Identifier: 160875711
GI number: 160875711
Start: 3073075
End: 3073539
Strand: Reverse
Name: 160875711
Synonym: Sbal195_2599
Alternate gene names: NA
Gene position: 3073539-3073075 (Counterclockwise)
Preceding gene: 160875712
Following gene: 160875710
Centisome position: 57.48
GC content: 43.66
Gene sequence:
>465_bases ATGACTGACAGTATTCAACACACACTCAAACAATTCGCCGCCGATAGCGCATTAACGACAACAACGCCATTGTGCAGTGA AGTCCCATTGTTTGATATTAACGCCTTGGGTGATTGGACATATCTAGGTACATCGCTGCCAGCAAAGTTTGCTAAGTTGT TCGCCAGTATTTTGCATTGCATCGATGATGAGTATTTCTTAATTACCCCAGTGGAGAAGGTGCGAGTGCAGGTTGAAGAT GCGCCTCTGCTGATTGTCGATTTCGAGCGAGCGCAACCTCATTCTCTGCTCAATGTGAGCACCAGTATTGACACTCTGCA CCACAATGTGGATATAAAGCAGATGAAGCTTACTGATGACAGTGTTTATTTGCCGCTTGAGCGTGGGTTATGGGGAAAAT TAGGTCGTGCCTGTTACTATAATTTTGTGAATGAATTCAATTTATCTGATCTAAATGAGCAGTGA
Upstream 100 bases:
>100_bases CCAGTGAGCTTGTACTGGCATATCTAAGTGTTGAATGTCACACTAAAGCCAGCCGCAAGGCTGGTTTTTTTATGGATGAT GGAGGCCGCAGATAGAAAAG
Downstream 100 bases:
>100_bases GTTCGTAGGTTAATAGCATAATTAGCTGTGGTGTTAGCTAGTTTATTGCGGGTTAAGTGGTAGTATTAAAACTGACTCTG TCTTCTTATAATGGCGCACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MTDSIQHTLKQFAADSALTTTTPLCSEVPLFDINALGDWTYLGTSLPAKFAKLFASILHCIDDEYFLITPVEKVRVQVED APLLIVDFERAQPHSLLNVSTSIDTLHHNVDIKQMKLTDDSVYLPLERGLWGKLGRACYYNFVNEFNLSDLNEQ
Sequences:
>Translated_154_residues MTDSIQHTLKQFAADSALTTTTPLCSEVPLFDINALGDWTYLGTSLPAKFAKLFASILHCIDDEYFLITPVEKVRVQVED APLLIVDFERAQPHSLLNVSTSIDTLHHNVDIKQMKLTDDSVYLPLERGLWGKLGRACYYNFVNEFNLSDLNEQ >Mature_153_residues TDSIQHTLKQFAADSALTTTTPLCSEVPLFDINALGDWTYLGTSLPAKFAKLFASILHCIDDEYFLITPVEKVRVQVEDA PLLIVDFERAQPHSLLNVSTSIDTLHHNVDIKQMKLTDDSVYLPLERGLWGKLGRACYYNFVNEFNLSDLNEQ
Specific function: Unknown
COG id: COG3816
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17406; Mature: 17275
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSIQHTLKQFAADSALTTTTPLCSEVPLFDINALGDWTYLGTSLPAKFAKLFASILHC CCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCEECCCCCHHHHHHHHHHHHHH IDDEYFLITPVEKVRVQVEDAPLLIVDFERAQPHSLLNVSTSIDTLHHNVDIKQMKLTDD HCCCEEEEECHHHEEEEECCCCEEEEECCCCCCCCEEEEHHHHHHHHCCCCEEEEEECCC SVYLPLERGLWGKLGRACYYNFVNEFNLSDLNEQ CEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TDSIQHTLKQFAADSALTTTTPLCSEVPLFDINALGDWTYLGTSLPAKFAKLFASILHC CCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCEECCCCCHHHHHHHHHHHHHH IDDEYFLITPVEKVRVQVEDAPLLIVDFERAQPHSLLNVSTSIDTLHHNVDIKQMKLTDD HCCCEEEEECHHHEEEEECCCCEEEEECCCCCCCCEEEEHHHHHHHHCCCCEEEEEECCC SVYLPLERGLWGKLGRACYYNFVNEFNLSDLNEQ CEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA