Click here to switch to the map view.

The map label for this gene is ybgI [H]

Identifier: 160875692

GI number: 160875692

Start: 3054765

End: 3055517

Strand: Reverse

Name: ybgI [H]

Synonym: Sbal195_2580

Alternate gene names: 160875692

Gene position: 3055517-3054765 (Counterclockwise)

Preceding gene: 160875693

Following gene: 160875689

Centisome position: 57.14

GC content: 50.2

Gene sequence:

>753_bases
ATGACACGGACAGAATTAACCCAATATTTAGCCGATTTTTTACATGTATCGGCGTTTAAAGATTACGCGCCCAATGGGCT
GCAAATAGAAGGCAAGGATGAGATCCGCACCATAGTGACGGGCGTGACTGCGTGTCAGGCTTTGATCGATGAAGCGATTC
GATTAAACGCCGATGCGATTTTGGTCCATCACGGCTTTTTTTGGAAGAATGAGCCTGAAGTGATCACTGGTATGAAACAA
CGCCGGATTAAGGCGCTACTCAAGCATGATATTAATTTATTTGGCTATCATTTGCCCTTAGATGCCCACCCAATGCTGGG
TAATAACGCGACCTTAGGCAGGCAACTTGGGATCGTCGACGCAGAAGCCATCGAAGAGGTGGCTCAGGGGCTGCTGTGGC
GTGGAAAACTTGATCTTGCGGTTAGTGCTAGCGAATTTTCTCACACCCTTGAGGATGCGTTAGGCAGAGCCCCACTGCAC
ATAGGTGATGGCGATGCCAAGATCCAACATTTAGCTTGGTGTACTGGCGGCGCGCAGGACTATATCGATGTTGCGGCGAG
TTTAGGTGTGGATGCGTTTATCAGTGGTGAAGTGTCCGAGCGCACTTTCCACAGTGCGGTGGAGCAGGGCATACATTATT
TTGCGGCGGGGCACCATGCGACCGAACGTTTCGGTATTCAAGCCTTAGGCCGTCATCTCGCCCGCGAGTTTGATCTCGTG
CACCATTTTGTGGATATCACTAATCCGGTCTAA

Upstream 100 bases:

>100_bases
GGCGGTGTGCGTGTTGATGTCGCGATGTAAGCGACTGTCTTATCTTGATTAAGTCGTCATCTTCAGTAAATGGTCATCTC
GAGTAAAGGACGGTAATGCA

Downstream 100 bases:

>100_bases
TCCAGTCTTAAAGCGGCTTATGATGATCATATTGCCGTTTTATCCCTAATCGAAAGGCGAGCATAGCTCGCCTTTTTTAC
TGTGAGTTATGGTGACTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MTRTELTQYLADFLHVSAFKDYAPNGLQIEGKDEIRTIVTGVTACQALIDEAIRLNADAILVHHGFFWKNEPEVITGMKQ
RRIKALLKHDINLFGYHLPLDAHPMLGNNATLGRQLGIVDAEAIEEVAQGLLWRGKLDLAVSASEFSHTLEDALGRAPLH
IGDGDAKIQHLAWCTGGAQDYIDVAASLGVDAFISGEVSERTFHSAVEQGIHYFAAGHHATERFGIQALGRHLAREFDLV
HHFVDITNPV

Sequences:

>Translated_250_residues
MTRTELTQYLADFLHVSAFKDYAPNGLQIEGKDEIRTIVTGVTACQALIDEAIRLNADAILVHHGFFWKNEPEVITGMKQ
RRIKALLKHDINLFGYHLPLDAHPMLGNNATLGRQLGIVDAEAIEEVAQGLLWRGKLDLAVSASEFSHTLEDALGRAPLH
IGDGDAKIQHLAWCTGGAQDYIDVAASLGVDAFISGEVSERTFHSAVEQGIHYFAAGHHATERFGIQALGRHLAREFDLV
HHFVDITNPV
>Mature_249_residues
TRTELTQYLADFLHVSAFKDYAPNGLQIEGKDEIRTIVTGVTACQALIDEAIRLNADAILVHHGFFWKNEPEVITGMKQR
RIKALLKHDINLFGYHLPLDAHPMLGNNATLGRQLGIVDAEAIEEVAQGLLWRGKLDLAVSASEFSHTLEDALGRAPLHI
GDGDAKIQHLAWCTGGAQDYIDVAASLGVDAFISGEVSERTFHSAVEQGIHYFAAGHHATERFGIQALGRHLAREFDLVH
HFVDITNPV

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=250, Percent_Identity=57.2, Blast_Score=283, Evalue=9e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 27515; Mature: 27384

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTELTQYLADFLHVSAFKDYAPNGLQIEGKDEIRTIVTGVTACQALIDEAIRLNADAI
CCHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
LVHHGFFWKNEPEVITGMKQRRIKALLKHDINLFGYHLPLDAHPMLGNNATLGRQLGIVD
EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCCCCHHCCCCC
AEAIEEVAQGLLWRGKLDLAVSASEFSHTLEDALGRAPLHIGDGDAKIQHLAWCTGGAQD
HHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCCCEEECCCCHHHHHEEEECCCHHH
YIDVAASLGVDAFISGEVSERTFHSAVEQGIHYFAAGHHATERFGIQALGRHLAREFDLV
HHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
HHFVDITNPV
HHHHHHCCCC
>Mature Secondary Structure 
TRTELTQYLADFLHVSAFKDYAPNGLQIEGKDEIRTIVTGVTACQALIDEAIRLNADAI
CHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
LVHHGFFWKNEPEVITGMKQRRIKALLKHDINLFGYHLPLDAHPMLGNNATLGRQLGIVD
EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCCCCHHCCCCC
AEAIEEVAQGLLWRGKLDLAVSASEFSHTLEDALGRAPLHIGDGDAKIQHLAWCTGGAQD
HHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCCCEEECCCCHHHHHEEEECCCHHH
YIDVAASLGVDAFISGEVSERTFHSAVEQGIHYFAAGHHATERFGIQALGRHLAREFDLV
HHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
HHFVDITNPV
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]