| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875627
Identifier: 160875627
GI number: 160875627
Start: 2969232
End: 2971511
Strand: Reverse
Name: 160875627
Synonym: Sbal195_2515
Alternate gene names: NA
Gene position: 2971511-2969232 (Counterclockwise)
Preceding gene: 160875628
Following gene: 160875626
Centisome position: 55.57
GC content: 49.78
Gene sequence:
>2280_bases ATGCGGCGCTTACTATTTGAGATACAAGGAATAACCATGAAGTACTTGGTTAGCGTAGTTGCATGCTGTTTATTATCGGC CTGTTCTTTTGGGGATGCTGATGTTGAGTTTACACCTGAAAAAGGGGAAGAGCGCTCGTATCAGCTGTATAGCACCACCA ACATCACTGTAGACAACGGTCGGCGTACCGAAACGGTTAACACCAGCTCACATCAATTGCTGCGTTATAAGGTCCTCGAA ACAGGCAAAAACAGTCGGTTTCAAGTGCACGTCGATTACATGAACATGCGCGATGGTCAAGGGAGCGGCGTCAGTAGTGG CCAGCGGGCCGATCGTAATCCTGAAATGCACGCTATTTTCTCGCAGGGATTTGAATTTACATTAAATCTAGACGATGGCA GCGTTAAAGAATTCACTGCATTAAACAAACCTGTATGGCAGGCGCTGCTGGCTAAACGCGGCGCAGAGCTTGAGCAGGAG TTGAAAAAGCTCTTTAGTTCATCGGCCTTTCTTAACACTATACCCGCCAAAGCGGGGGCGGTCGTCGCGCTTCCTGCCTA TCAAGGCCACGCCAATGCCAAACTTACTGTATTGCAAGTCACTGATACGCATGTGTTAGCCAAAGTTGAAAGTGACGGCG AGCAAGCCAAAATCTACGGTCAGCTGATGTTAGAACGTGAGCGGGGTTGGTTAGCGCAGTTAGCTTTAGTGGCAGAAGCG CCGTTTGAGCGCTACGGCTATAAGGGCACAGTGCGCAGCAACGTTATTATGTTGCCGCAGCAGCGCCAGTTGGGTGATCT GACACAGCGTTTAGGTTTTGATTATGATTTCCCAGCCTTTGAGTATCAAAAACAGCCTGACTTTGTGCTGGATGAGATCA ATAAGACCTTAGCCATTGATGCCGTATTTGCCTATGATGCGGGTTACTTTTACCAGCAAGATGACCTATTAAATCTAACC TATCAGCATGACTTTTCAGGTTTTAAATCCGAAGGTGGGTTTAGCTTAACCGATATCACGGCACACAGCGCGGATGGCAC TGTGCTGCCGCTGCAACTGAGCAAGGTAGGCAGTTACAGTTATCCAGAACAGGATGGTTTCCATCAATCTGTGCAGCAAA ATCTGCTTATTGGCTGGAATGCACCAAATGATCTCTTAGCTCAAGTCGCTGAGTTTCGCGCGACGGCCCATTACCACGGT GCAAAACTGGTCAAACTTAACCTGACACCCGATCCCAGTAAAACCGTGAGCGTGCAGTATGAAGATTTACAGCTCGAACT CTCGCCAATCCCCGACAAGCCATTCAGTTATCTGCTGAAATCGCGAGGCGGCGCTGATAAAACGTGGTTATACCGGCGCT ATGATGGTGCCGAAGGCGCTATGGTGCACTATCTTTCACCGCCAGCCACTGGACCGGATTGGCTAACGTCGGCAGAGCAA AATATGTTGGCGCTGGCCTCATCGGCGCAATATGAAACGATTACACAGTTTACCTTTGCCGCCGCGCCGTCGACGCTGAC ACTCTATATAAATACTGAGGTTGACAGCGGCGAACTGACTAAGAATATTCGTTTTATTCCGACCCTAGATTACGCGCAAA ATATGGCTTATCCGCCGGCGCAGCAGCAACTGCTTTATAGCGATGATATGTATGCGTCCTATGATAATCAGCCGCAACCT AGCACAACCGTAGATCCCGCCTTACTTGAGCCGCAAATCGTCGCCAAATACGGCGTCAGCATGCTGTTAACGTCCGAGCA GGCAGCGGTGTGCACGCTCAGTGTGGTGGACGCACCTAAGGTAAACGGACACACGCTGCAATGGACAAACACCAGCGCCA GCAGCAACACGGGTTTTGGTACTGGGCTGGATAAGTTTGTGCTGTACCAACTGAGTAGCGCCGATGGGATCCGCCGCAAT TTTTACGACATCAATGTCAGCAGCACCTTGGCCTGTACCGGTACGCCTCAATGGCAAGCACTCGCATATCACCCTGAGCA AAGCTGGTTGATTGATGTCAGTCAGCTGCCAGATTTGGATACCACTCAAACCGTGGCCGACTTTATGCGGCGCTATCGTT TTCTAAATGCGCAGAATTTACCCCTTGCGCCTGCTATGCAAGGTGACAGTAGTGATTTTTATCAGCGTCCGTTGCAACAA GTATTACGTGAGCAACGCTGGTTTGTGCTGGCGGGGCGCGCGGCACAGATAGAAAAGCTGACGATAAGCGGCGAACCTGT TAATAAACAGTGGGTTAATACATTCCCTGCGTTACCTTAA
Upstream 100 bases:
>100_bases ATAAAACTAACTTTAGGCATCACTGCAAAAGCGGTTTTCCTGTTGCGCTGAACTGGCATAAACAGCAAAGCATTTTATTT ACTGGGCGTGAAAGGGCATA
Downstream 100 bases:
>100_bases GGAGCAGAATATGCGAGTCTTATTACTATTATCTGCGCTACTTATGTCGTTTAATTTGTCGGCTGAGCGAATTTTACTCG ACCAAGAATGGCGGCTTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 759; Mature: 759
Protein sequence:
>759_residues MRRLLFEIQGITMKYLVSVVACCLLSACSFGDADVEFTPEKGEERSYQLYSTTNITVDNGRRTETVNTSSHQLLRYKVLE TGKNSRFQVHVDYMNMRDGQGSGVSSGQRADRNPEMHAIFSQGFEFTLNLDDGSVKEFTALNKPVWQALLAKRGAELEQE LKKLFSSSAFLNTIPAKAGAVVALPAYQGHANAKLTVLQVTDTHVLAKVESDGEQAKIYGQLMLERERGWLAQLALVAEA PFERYGYKGTVRSNVIMLPQQRQLGDLTQRLGFDYDFPAFEYQKQPDFVLDEINKTLAIDAVFAYDAGYFYQQDDLLNLT YQHDFSGFKSEGGFSLTDITAHSADGTVLPLQLSKVGSYSYPEQDGFHQSVQQNLLIGWNAPNDLLAQVAEFRATAHYHG AKLVKLNLTPDPSKTVSVQYEDLQLELSPIPDKPFSYLLKSRGGADKTWLYRRYDGAEGAMVHYLSPPATGPDWLTSAEQ NMLALASSAQYETITQFTFAAAPSTLTLYINTEVDSGELTKNIRFIPTLDYAQNMAYPPAQQQLLYSDDMYASYDNQPQP STTVDPALLEPQIVAKYGVSMLLTSEQAAVCTLSVVDAPKVNGHTLQWTNTSASSNTGFGTGLDKFVLYQLSSADGIRRN FYDINVSSTLACTGTPQWQALAYHPEQSWLIDVSQLPDLDTTQTVADFMRRYRFLNAQNLPLAPAMQGDSSDFYQRPLQQ VLREQRWFVLAGRAAQIEKLTISGEPVNKQWVNTFPALP
Sequences:
>Translated_759_residues MRRLLFEIQGITMKYLVSVVACCLLSACSFGDADVEFTPEKGEERSYQLYSTTNITVDNGRRTETVNTSSHQLLRYKVLE TGKNSRFQVHVDYMNMRDGQGSGVSSGQRADRNPEMHAIFSQGFEFTLNLDDGSVKEFTALNKPVWQALLAKRGAELEQE LKKLFSSSAFLNTIPAKAGAVVALPAYQGHANAKLTVLQVTDTHVLAKVESDGEQAKIYGQLMLERERGWLAQLALVAEA PFERYGYKGTVRSNVIMLPQQRQLGDLTQRLGFDYDFPAFEYQKQPDFVLDEINKTLAIDAVFAYDAGYFYQQDDLLNLT YQHDFSGFKSEGGFSLTDITAHSADGTVLPLQLSKVGSYSYPEQDGFHQSVQQNLLIGWNAPNDLLAQVAEFRATAHYHG AKLVKLNLTPDPSKTVSVQYEDLQLELSPIPDKPFSYLLKSRGGADKTWLYRRYDGAEGAMVHYLSPPATGPDWLTSAEQ NMLALASSAQYETITQFTFAAAPSTLTLYINTEVDSGELTKNIRFIPTLDYAQNMAYPPAQQQLLYSDDMYASYDNQPQP STTVDPALLEPQIVAKYGVSMLLTSEQAAVCTLSVVDAPKVNGHTLQWTNTSASSNTGFGTGLDKFVLYQLSSADGIRRN FYDINVSSTLACTGTPQWQALAYHPEQSWLIDVSQLPDLDTTQTVADFMRRYRFLNAQNLPLAPAMQGDSSDFYQRPLQQ VLREQRWFVLAGRAAQIEKLTISGEPVNKQWVNTFPALP >Mature_759_residues MRRLLFEIQGITMKYLVSVVACCLLSACSFGDADVEFTPEKGEERSYQLYSTTNITVDNGRRTETVNTSSHQLLRYKVLE TGKNSRFQVHVDYMNMRDGQGSGVSSGQRADRNPEMHAIFSQGFEFTLNLDDGSVKEFTALNKPVWQALLAKRGAELEQE LKKLFSSSAFLNTIPAKAGAVVALPAYQGHANAKLTVLQVTDTHVLAKVESDGEQAKIYGQLMLERERGWLAQLALVAEA PFERYGYKGTVRSNVIMLPQQRQLGDLTQRLGFDYDFPAFEYQKQPDFVLDEINKTLAIDAVFAYDAGYFYQQDDLLNLT YQHDFSGFKSEGGFSLTDITAHSADGTVLPLQLSKVGSYSYPEQDGFHQSVQQNLLIGWNAPNDLLAQVAEFRATAHYHG AKLVKLNLTPDPSKTVSVQYEDLQLELSPIPDKPFSYLLKSRGGADKTWLYRRYDGAEGAMVHYLSPPATGPDWLTSAEQ NMLALASSAQYETITQFTFAAAPSTLTLYINTEVDSGELTKNIRFIPTLDYAQNMAYPPAQQQLLYSDDMYASYDNQPQP STTVDPALLEPQIVAKYGVSMLLTSEQAAVCTLSVVDAPKVNGHTLQWTNTSASSNTGFGTGLDKFVLYQLSSADGIRRN FYDINVSSTLACTGTPQWQALAYHPEQSWLIDVSQLPDLDTTQTVADFMRRYRFLNAQNLPLAPAMQGDSSDFYQRPLQQ VLREQRWFVLAGRAAQIEKLTISGEPVNKQWVNTFPALP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84628; Mature: 84628
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLLFEIQGITMKYLVSVVACCLLSACSFGDADVEFTPEKGEERSYQLYSTTNITVDNG CCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEEEEEEEECCC RRTETVNTSSHQLLRYKVLETGKNSRFQVHVDYMNMRDGQGSGVSSGQRADRNPEMHAIF CEEEEECCCCHHEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEE SQGFEFTLNLDDGSVKEFTALNKPVWQALLAKRGAELEQELKKLFSSSAFLNTIPAKAGA CCCCEEEEECCCCCCHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHCCCCCCCCC VVALPAYQGHANAKLTVLQVTDTHVLAKVESDGEQAKIYGQLMLERERGWLAQLALVAEA EEEEECCCCCCCCEEEEEEEECCEEEEEECCCCCCEEEEEEEEEECCCCHHHHHHHHHHC PFERYGYKGTVRSNVIMLPQQRQLGDLTQRLGFDYDFPAFEYQKQPDFVLDEINKTLAID CHHHCCCCCEECCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCEEEEE AVFAYDAGYFYQQDDLLNLTYQHDFSGFKSEGGFSLTDITAHSADGTVLPLQLSKVGSYS EEEEECCCCEEECCCEEEEEEECCCCCCCCCCCEEEEEEEEECCCCEEEEEEEECCCCCC YPEQDGFHQSVQQNLLIGWNAPNDLLAQVAEFRATAHYHGAKLVKLNLTPDPSKTVSVQY CCCCCCHHHHHHCCEEEEECCCHHHHHHHHHHHHHHEECCEEEEEEECCCCCCCEEEEEE EDLQLELSPIPDKPFSYLLKSRGGADKTWLYRRYDGAEGAMVHYLSPPATGPDWLTSAEQ EEEEEEEECCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEECCCCCCHHHHHHCCC NMLALASSAQYETITQFTFAAAPSTLTLYINTEVDSGELTKNIRFIPTLDYAQNMAYPPA CEEEEECCCCCHHHHEEEEEECCCEEEEEEEECCCCCCCCCCEEEEEECHHHHCCCCCCH QQQLLYSDDMYASYDNQPQPSTTVDPALLEPQIVAKYGVSMLLTSEQAAVCTLSVVDAPK HHHEEECCCCEECCCCCCCCCCCCCCHHCCCHHHHHCCCEEEEECCCCEEEEEEEECCCC VNGHTLQWTNTSASSNTGFGTGLDKFVLYQLSSADGIRRNFYDINVSSTLACTGTPQWQA CCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCEEEECCCCCCEE LAYHPEQSWLIDVSQLPDLDTTQTVADFMRRYRFLNAQNLPLAPAMQGDSSDFYQRPLQQ EEECCCCCEEEEHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH VLREQRWFVLAGRAAQIEKLTISGEPVNKQWVNTFPALP HHHHCCEEEEECCCCEEEEEEECCCCCCHHHHHHCCCCC >Mature Secondary Structure MRRLLFEIQGITMKYLVSVVACCLLSACSFGDADVEFTPEKGEERSYQLYSTTNITVDNG CCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEEEEEEEECCC RRTETVNTSSHQLLRYKVLETGKNSRFQVHVDYMNMRDGQGSGVSSGQRADRNPEMHAIF CEEEEECCCCHHEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEE SQGFEFTLNLDDGSVKEFTALNKPVWQALLAKRGAELEQELKKLFSSSAFLNTIPAKAGA CCCCEEEEECCCCCCHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHCCCCCCCCC VVALPAYQGHANAKLTVLQVTDTHVLAKVESDGEQAKIYGQLMLERERGWLAQLALVAEA EEEEECCCCCCCCEEEEEEEECCEEEEEECCCCCCEEEEEEEEEECCCCHHHHHHHHHHC PFERYGYKGTVRSNVIMLPQQRQLGDLTQRLGFDYDFPAFEYQKQPDFVLDEINKTLAID CHHHCCCCCEECCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCEEEEE AVFAYDAGYFYQQDDLLNLTYQHDFSGFKSEGGFSLTDITAHSADGTVLPLQLSKVGSYS EEEEECCCCEEECCCEEEEEEECCCCCCCCCCCEEEEEEEEECCCCEEEEEEEECCCCCC YPEQDGFHQSVQQNLLIGWNAPNDLLAQVAEFRATAHYHGAKLVKLNLTPDPSKTVSVQY CCCCCCHHHHHHCCEEEEECCCHHHHHHHHHHHHHHEECCEEEEEEECCCCCCCEEEEEE EDLQLELSPIPDKPFSYLLKSRGGADKTWLYRRYDGAEGAMVHYLSPPATGPDWLTSAEQ EEEEEEEECCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEECCCCCCHHHHHHCCC NMLALASSAQYETITQFTFAAAPSTLTLYINTEVDSGELTKNIRFIPTLDYAQNMAYPPA CEEEEECCCCCHHHHEEEEEECCCEEEEEEEECCCCCCCCCCEEEEEECHHHHCCCCCCH QQQLLYSDDMYASYDNQPQPSTTVDPALLEPQIVAKYGVSMLLTSEQAAVCTLSVVDAPK HHHEEECCCCEECCCCCCCCCCCCCCHHCCCHHHHHCCCEEEEECCCCEEEEEEEECCCC VNGHTLQWTNTSASSNTGFGTGLDKFVLYQLSSADGIRRNFYDINVSSTLACTGTPQWQA CCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCEEEECCCCCCEE LAYHPEQSWLIDVSQLPDLDTTQTVADFMRRYRFLNAQNLPLAPAMQGDSSDFYQRPLQQ EEECCCCCEEEEHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH VLREQRWFVLAGRAAQIEKLTISGEPVNKQWVNTFPALP HHHHCCEEEEECCCCEEEEEEECCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA