| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is torR [C]
Identifier: 160875478
GI number: 160875478
Start: 2788451
End: 2790184
Strand: Reverse
Name: torR [C]
Synonym: Sbal195_2366
Alternate gene names: 160875478
Gene position: 2790184-2788451 (Counterclockwise)
Preceding gene: 160875479
Following gene: 160875477
Centisome position: 52.18
GC content: 39.1
Gene sequence:
>1734_bases ATGGTATCACTTACTCAGCCTGAACATTTTATATTAGTTGTCGATGATGATGCTATTGCGAGTCAGAGGATCAGTGACTT TATTCATAGTAAAGGTTACAACGTGATTGTTTGTAATGATCTCGAGGAGGTATTTTTTGAAATAACGCAAAATACGGTTG ATTTAATCCTGATTAACTACTGGCTCAAAGATGGCACTGCACTAGCGTTACTGAATAAGTTGAACGAGGAAAAACAAGAA ACGCCTGTTATTGTGATGAGTGAGACTAAAGAAAGCCAAAACGTGTTAGCGTGTTTTAGTATGGGGGTATTAGATTTTGT CGTTAAACCGATCAACGTTGAAATATTTTGGTATAAAGTTGAATGCTTACTTAGCCGTGTGCAACTACAACATAAAGTCG AACAACAAAGAATTGAACTCGAAAAAATGCTTTATGAGAAGGCCAGAGAAGAACACATGGCCCGGCATTTGTTTGAGCAC TTAGTTAATATTGATAATACTGATTTTGATTTTGTGCAGACCTACTGCCAAGCAAGTGCCAATTTTAGTGGTGATATTAT CCTTAATGGCATGGCACCTAATGGCAATTTCTTCTTAATTCTCGCTGATTCAACGGGTCATGGCCTGAGTGCAGCCATGC CGATTATGCGCGTCGCGAGCACATTTAGAGCTATGGTTTCAAAGGGGTTTTCTTTAATAACGCTGATCTACGAGCTGAAT GCTAAGGTTCATCGCGAGAATCCAGAAGACAGATTCGTAGCCTGTATTATTTTGGAAGCCGATTTTAATCGCAATAAATT ACACATTTGGAATGGCGGTATGCCGCCTGTGTATATTCAGGCTGATGAACACGCCAAGTTACCGAATACTGATATTGAAG AACGACATATTTTAAGTTCAGATAGCCATAAAGCGATAGAACAATTTAAATCGACCAATATGGCACTGGGTATATTGCCG CCACATACTTTTATTGCTGATATTTTTACCGTTGATTTACCGATTAATGGCCATGCCTGTCTTTTTAGTGACGGTTTAAT TGAGCAATATACCCATGAAGAATGCCCATTTGGTATTGATAAATTAAAAGCGTTATTTATTAATTTGTCCGGTGGCCTTA CCCATTATTTGAATGAAAATATGCATGAGTACTGCTCTGATGAAAATATTGCAGATGATATTACGATTTGCACTTTAGAT TTCGAGAAACTAAAAAGTTGGCATCAAAGTCGAGAAGTCAGCCGAGTGCAATCTATTATGGACGGTGAGTTTTGCTGGGA TGTAAGTATCGCCGGACCTATGTTACTCAGCGCTGACTATTTAAGCTCGTTAAATCAATTTTTAAGCATATTTGGCTTTG CCACTCATTTCTGCCAACGGGTTTTTACTGTCGTCGCAGAGTTATTTAGCAACGCCATTGACCATGGTGTACTAAAATTA GATTCACGGCTAAAAAACGATCCAGAAGGCTTCGAACTGTACCATAGTATTAGGGACAGTTTTGCAGACAGACTCACATC AAACGATTGGGTGAAAGTGAGCATTATCTGGCGCTCATCGCAAAACGAGTTACATATTAGTGTGAGCGACAGTGGAAAAG GTTTTACGGGTAATGAGAACATCATTGCTGACATTCCTCAGTTGTCTGGTCGCGGTCTCTCACTGGTGAAAACATTATCT AAGACCTACGAATTAGTATCCCCAGGGAATATAACTAAAGTCATAATGGAATAG
Upstream 100 bases:
>100_bases TACATATTTCAACATCTGTCAAAGGGGCACATGGACAGGCGAATGAAATCCTAGACATCGCCAATATGCAGAAAATATAC ATCATAGAGTAACACTCGTT
Downstream 100 bases:
>100_bases CGCATGAGTAAAAAAATATTAATTGTTGATGATTCCGCTGCGATTCGACAAATGGTCGAAGCGACCCTTAAATCGGCTAA CTATCAAGTGGTGCTGGCCA
Product: response regulator receiver protein
Products: NA
Alternate protein names: Response Regulator; Two-Component Response Regulator; Response Regulator Receiver Modulated Serine Phosphatase; Response Regulator Receiver Domain-Containing Protein; Flagellar Basal-Body Rod Protein FlgC; Serine Phosphatase RsbU Regulator Of Sigma Subunit; Response Regulator Receiver Domain Protein; Histidine Kinase; Stage II Sporulation E Family Protein; Phosphoserine Phosphatase; Response Regulator Receiver; Chemotaxis Response Regulator; Response Regulator Of Sigma Subunit Serine Phosphatase; PAS/PAC Sensor Protein; Stage II Sporulation E; Sensor Histidine Kinase/Response Regulator
Number of amino acids: Translated: 577; Mature: 577
Protein sequence:
>577_residues MVSLTQPEHFILVVDDDAIASQRISDFIHSKGYNVIVCNDLEEVFFEITQNTVDLILINYWLKDGTALALLNKLNEEKQE TPVIVMSETKESQNVLACFSMGVLDFVVKPINVEIFWYKVECLLSRVQLQHKVEQQRIELEKMLYEKAREEHMARHLFEH LVNIDNTDFDFVQTYCQASANFSGDIILNGMAPNGNFFLILADSTGHGLSAAMPIMRVASTFRAMVSKGFSLITLIYELN AKVHRENPEDRFVACIILEADFNRNKLHIWNGGMPPVYIQADEHAKLPNTDIEERHILSSDSHKAIEQFKSTNMALGILP PHTFIADIFTVDLPINGHACLFSDGLIEQYTHEECPFGIDKLKALFINLSGGLTHYLNENMHEYCSDENIADDITICTLD FEKLKSWHQSREVSRVQSIMDGEFCWDVSIAGPMLLSADYLSSLNQFLSIFGFATHFCQRVFTVVAELFSNAIDHGVLKL DSRLKNDPEGFELYHSIRDSFADRLTSNDWVKVSIIWRSSQNELHISVSDSGKGFTGNENIIADIPQLSGRGLSLVKTLS KTYELVSPGNITKVIME
Sequences:
>Translated_577_residues MVSLTQPEHFILVVDDDAIASQRISDFIHSKGYNVIVCNDLEEVFFEITQNTVDLILINYWLKDGTALALLNKLNEEKQE TPVIVMSETKESQNVLACFSMGVLDFVVKPINVEIFWYKVECLLSRVQLQHKVEQQRIELEKMLYEKAREEHMARHLFEH LVNIDNTDFDFVQTYCQASANFSGDIILNGMAPNGNFFLILADSTGHGLSAAMPIMRVASTFRAMVSKGFSLITLIYELN AKVHRENPEDRFVACIILEADFNRNKLHIWNGGMPPVYIQADEHAKLPNTDIEERHILSSDSHKAIEQFKSTNMALGILP PHTFIADIFTVDLPINGHACLFSDGLIEQYTHEECPFGIDKLKALFINLSGGLTHYLNENMHEYCSDENIADDITICTLD FEKLKSWHQSREVSRVQSIMDGEFCWDVSIAGPMLLSADYLSSLNQFLSIFGFATHFCQRVFTVVAELFSNAIDHGVLKL DSRLKNDPEGFELYHSIRDSFADRLTSNDWVKVSIIWRSSQNELHISVSDSGKGFTGNENIIADIPQLSGRGLSLVKTLS KTYELVSPGNITKVIME >Mature_577_residues MVSLTQPEHFILVVDDDAIASQRISDFIHSKGYNVIVCNDLEEVFFEITQNTVDLILINYWLKDGTALALLNKLNEEKQE TPVIVMSETKESQNVLACFSMGVLDFVVKPINVEIFWYKVECLLSRVQLQHKVEQQRIELEKMLYEKAREEHMARHLFEH LVNIDNTDFDFVQTYCQASANFSGDIILNGMAPNGNFFLILADSTGHGLSAAMPIMRVASTFRAMVSKGFSLITLIYELN AKVHRENPEDRFVACIILEADFNRNKLHIWNGGMPPVYIQADEHAKLPNTDIEERHILSSDSHKAIEQFKSTNMALGILP PHTFIADIFTVDLPINGHACLFSDGLIEQYTHEECPFGIDKLKALFINLSGGLTHYLNENMHEYCSDENIADDITICTLD FEKLKSWHQSREVSRVQSIMDGEFCWDVSIAGPMLLSADYLSSLNQFLSIFGFATHFCQRVFTVVAELFSNAIDHGVLKL DSRLKNDPEGFELYHSIRDSFADRLTSNDWVKVSIIWRSSQNELHISVSDSGKGFTGNENIIADIPQLSGRGLSLVKTLS KTYELVSPGNITKVIME
Specific function: Member Of The Two-Component Regulatory System Tors/Torr Involved In The Anaerobic Utilization Of Trimethylamine-N-Oxide (Tmao). Phosphorylated Torr Activates The Transcription Of The Torcad Operon By Binding To Four Decameric Boxes Located In The Torcad P
COG id: COG2208
COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65335; Mature: 65335
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSLTQPEHFILVVDDDAIASQRISDFIHSKGYNVIVCNDLEEVFFEITQNTVDLILINY CCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCEEEEEEE WLKDGTALALLNKLNEEKQETPVIVMSETKESQNVLACFSMGVLDFVVKPINVEIFWYKV HHCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEH ECLLSRVQLQHKVEQQRIELEKMLYEKAREEHMARHLFEHLVNIDNTDFDFVQTYCQASA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC NFSGDIILNGMAPNGNFFLILADSTGHGLSAAMPIMRVASTFRAMVSKGFSLITLIYELN CCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC AKVHRENPEDRFVACIILEADFNRNKLHIWNGGMPPVYIQADEHAKLPNTDIEERHILSS CCEECCCCCCEEEEEEEEEECCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCHHHCCCC DSHKAIEQFKSTNMALGILPPHTFIADIFTVDLPINGHACLFSDGLIEQYTHEECPFGID CCHHHHHHHHCCCEEEEECCCHHHHEEHEEEEECCCCCEEEECCCHHHHHCCCCCCCCHH KLKALFINLSGGLTHYLNENMHEYCSDENIADDITICTLDFEKLKSWHQSREVSRVQSIM HHEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHH DGEFCWDVSIAGPMLLSADYLSSLNQFLSIFGFATHFCQRVFTVVAELFSNAIDHGVLKL CCCEEEEEECCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSRLKNDPEGFELYHSIRDSFADRLTSNDWVKVSIIWRSSQNELHISVSDSGKGFTGNEN HHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCC IIADIPQLSGRGLSLVKTLSKTYELVSPGNITKVIME EEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEC >Mature Secondary Structure MVSLTQPEHFILVVDDDAIASQRISDFIHSKGYNVIVCNDLEEVFFEITQNTVDLILINY CCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCEEEEEEE WLKDGTALALLNKLNEEKQETPVIVMSETKESQNVLACFSMGVLDFVVKPINVEIFWYKV HHCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEH ECLLSRVQLQHKVEQQRIELEKMLYEKAREEHMARHLFEHLVNIDNTDFDFVQTYCQASA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC NFSGDIILNGMAPNGNFFLILADSTGHGLSAAMPIMRVASTFRAMVSKGFSLITLIYELN CCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC AKVHRENPEDRFVACIILEADFNRNKLHIWNGGMPPVYIQADEHAKLPNTDIEERHILSS CCEECCCCCCEEEEEEEEEECCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCHHHCCCC DSHKAIEQFKSTNMALGILPPHTFIADIFTVDLPINGHACLFSDGLIEQYTHEECPFGID CCHHHHHHHHCCCEEEEECCCHHHHEEHEEEEECCCCCEEEECCCHHHHHCCCCCCCCHH KLKALFINLSGGLTHYLNENMHEYCSDENIADDITICTLDFEKLKSWHQSREVSRVQSIM HHEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHH DGEFCWDVSIAGPMLLSADYLSSLNQFLSIFGFATHFCQRVFTVVAELFSNAIDHGVLKL CCCEEEEEECCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSRLKNDPEGFELYHSIRDSFADRLTSNDWVKVSIIWRSSQNELHISVSDSGKGFTGNEN HHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCC IIADIPQLSGRGLSLVKTLSKTYELVSPGNITKVIME EEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA