| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yhiX [C]
Identifier: 160875462
GI number: 160875462
Start: 2771438
End: 2771830
Strand: Reverse
Name: yhiX [C]
Synonym: Sbal195_2350
Alternate gene names: 160875462
Gene position: 2771830-2771438 (Counterclockwise)
Preceding gene: 160875464
Following gene: 160875461
Centisome position: 51.84
GC content: 48.85
Gene sequence:
>393_bases GTGACTCATTCTACTTTTCATTCTGTCATTCCGCGCCAAGGTCACTTTCAATCGCCACGCTATGCACTGTTTGCCAGTGA ATATAGGCTCGGGTTGGCGGCGGGCATTCGTTTGTCACTGATGCGGGATAACTTAAGTTTGCCAGAGATGGCAGAAAAAC TATCGATGAGCCCAGCTACCTTAAAGCGCCGCTTGGCTGAAATGGATCTAAGCTTTGGCCAACTCGCCGATGAAACACGT TTAATCAAAGCCCTGTATTATTTAGCCACACCTTCGCAGGACGCTCACAGTATTGCCAATTCACTGTCCTTCAGCGACGC CAGTAATTTCAGGCGTTCTTTTAAACGCTGGACGGGCCAATTACCCACCTATTTTCGCAGCTGGCTGGCTTAA
Upstream 100 bases:
>100_bases ACCACCAGCAAATCTTTTTTTTACCGTGAATGTTCGCACCTTGGTAGAGTGAAATTCCTTCCACATCGGCGACTTTGAAT CACAACCCGCACCTCACGTT
Downstream 100 bases:
>100_bases GTCATAAGCGAGTAACAAGATGTCCTGCCTGTATTTCCAAGCATATTTTTTGTTTTTATTTATTCAAAGCGTGAATTTAG GTGAGAAATTTGTCGGCATT
Product: AraC family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; Helix-Turn-Helix- Domain Containing Protein AraC Type; Transcriptional Regulator AraC Family Protein; Transcriptional Regulator OruR; AraC Family Regulatory Protein; Helix-Turn-Helix Domain-Containing Protein
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MTHSTFHSVIPRQGHFQSPRYALFASEYRLGLAAGIRLSLMRDNLSLPEMAEKLSMSPATLKRRLAEMDLSFGQLADETR LIKALYYLATPSQDAHSIANSLSFSDASNFRRSFKRWTGQLPTYFRSWLA
Sequences:
>Translated_130_residues MTHSTFHSVIPRQGHFQSPRYALFASEYRLGLAAGIRLSLMRDNLSLPEMAEKLSMSPATLKRRLAEMDLSFGQLADETR LIKALYYLATPSQDAHSIANSLSFSDASNFRRSFKRWTGQLPTYFRSWLA >Mature_129_residues THSTFHSVIPRQGHFQSPRYALFASEYRLGLAAGIRLSLMRDNLSLPEMAEKLSMSPATLKRRLAEMDLSFGQLADETRL IKALYYLATPSQDAHSIANSLSFSDASNFRRSFKRWTGQLPTYFRSWLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14819; Mature: 14688
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: PS01124 HTH_ARAC_FAMILY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHSTFHSVIPRQGHFQSPRYALFASEYRLGLAAGIRLSLMRDNLSLPEMAEKLSMSPAT CCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHH LKRRLAEMDLSFGQLADETRLIKALYYLATPSQDAHSIANSLSFSDASNFRRSFKRWTGQ HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCC LPTYFRSWLA CHHHHHHHCC >Mature Secondary Structure THSTFHSVIPRQGHFQSPRYALFASEYRLGLAAGIRLSLMRDNLSLPEMAEKLSMSPAT CCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHH LKRRLAEMDLSFGQLADETRLIKALYYLATPSQDAHSIANSLSFSDASNFRRSFKRWTGQ HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCC LPTYFRSWLA CHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA