| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874808
Identifier: 160874808
GI number: 160874808
Start: 2039011
End: 2039988
Strand: Direct
Name: 160874808
Synonym: Sbal195_1691
Alternate gene names: NA
Gene position: 2039011-2039988 (Clockwise)
Preceding gene: 160874807
Following gene: 160874814
Centisome position: 38.13
GC content: 45.91
Gene sequence:
>978_bases TTGAGCCATTTTTTCAGTCGGTTGCCATTATGTTTGTCGTTAACTTGCTTAGTATTTCTGAGCATTGTTCCTGCCGTTTT CGCCAATAGTGAATCCCCCGCCAATACGTTTACACCTGCGACACTTACATCTGCGTCTCAAGCAAATGATGCTGGCGTGT CTGTTGATCCTGTTTCTATCAGTCACGTGCCTAGCAGTAATGCCAATGGCAGCAATCCGATAGAGTTGAGCAGTAATCCC AATTCTGTTTATGCCTTTGGCAGTTATCTCGGCACTGGTGTGTATCGCGCCGCTAACCAAAATGCGACCGTGGTCAGTAT TCCGTTAAGTTTTGATTTAAAGAAAGATAGCGGAAGCCAGACTTGGTTACGTTTACCTATCTCCTTTGGCTTTTTTGATT ATTTAGCCAAAGATATCACCGAAGGCGAGTTACCGTCGTCGATAGGCACTATGACCATTACCCCAGGTTTTGAGCACCAC TGGCAGGCGAGCGAAAACACTCGAATGGAAGGGTATTTAGATATCGGTTTTGGTACTAACTTCGATAAAAACGATAACGT TGCCATTATCGCCTCTGGGATCAGTAGCTTGTATGATTTTACCCTAGCTGGGCAAGATGCGGTGTGGGTGTCGAGATTAC GTTTCGCTGGGTACAGTGAGCACTATGGCAAGTTTGCCGATCAATTTGCGGTGTTACAAACTGGCGTGGATTTAGGATTA GCGCCGCGGTGGCAATGGTGGGATCTGCAGGTGCAACCAAGGATCTTTGCTGTGGGTTATTGGTATTTCAATGAGCTCAG ATTTATCAGCGAGATAGAGCAAGATACCATAGTTTCAGGCAGTTATGAGGCTGGTTTTTCCCTCGCATTTTCTAAGCCCC TTGGGGGCGAATTGCTGGGTGTTGATCGTATTGGATTCAGCTATCGCCGTGGTGATGGATTGAACATTTGGCGTTTGATG TTCAGTTTTCCTATCTAA
Upstream 100 bases:
>100_bases ACACATGATGTCTGAATATCATTTTATGGATGAAAATAAGTAGCTTTGTATTTATGATAGGTCGACCGATTGAGTCAGAA ATGAGTAAGGTTTAAGTCAA
Downstream 100 bases:
>100_bases GTAGGGTCAACTAGACGGCTTGAATATATAAACCGCTTGAACATGTCGATGTTGTGAACATGGGTTAACTTAGCACAGGA TTATCACCGCTTAATTTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MSHFFSRLPLCLSLTCLVFLSIVPAVFANSESPANTFTPATLTSASQANDAGVSVDPVSISHVPSSNANGSNPIELSSNP NSVYAFGSYLGTGVYRAANQNATVVSIPLSFDLKKDSGSQTWLRLPISFGFFDYLAKDITEGELPSSIGTMTITPGFEHH WQASENTRMEGYLDIGFGTNFDKNDNVAIIASGISSLYDFTLAGQDAVWVSRLRFAGYSEHYGKFADQFAVLQTGVDLGL APRWQWWDLQVQPRIFAVGYWYFNELRFISEIEQDTIVSGSYEAGFSLAFSKPLGGELLGVDRIGFSYRRGDGLNIWRLM FSFPI
Sequences:
>Translated_325_residues MSHFFSRLPLCLSLTCLVFLSIVPAVFANSESPANTFTPATLTSASQANDAGVSVDPVSISHVPSSNANGSNPIELSSNP NSVYAFGSYLGTGVYRAANQNATVVSIPLSFDLKKDSGSQTWLRLPISFGFFDYLAKDITEGELPSSIGTMTITPGFEHH WQASENTRMEGYLDIGFGTNFDKNDNVAIIASGISSLYDFTLAGQDAVWVSRLRFAGYSEHYGKFADQFAVLQTGVDLGL APRWQWWDLQVQPRIFAVGYWYFNELRFISEIEQDTIVSGSYEAGFSLAFSKPLGGELLGVDRIGFSYRRGDGLNIWRLM FSFPI >Mature_324_residues SHFFSRLPLCLSLTCLVFLSIVPAVFANSESPANTFTPATLTSASQANDAGVSVDPVSISHVPSSNANGSNPIELSSNPN SVYAFGSYLGTGVYRAANQNATVVSIPLSFDLKKDSGSQTWLRLPISFGFFDYLAKDITEGELPSSIGTMTITPGFEHHW QASENTRMEGYLDIGFGTNFDKNDNVAIIASGISSLYDFTLAGQDAVWVSRLRFAGYSEHYGKFADQFAVLQTGVDLGLA PRWQWWDLQVQPRIFAVGYWYFNELRFISEIEQDTIVSGSYEAGFSLAFSKPLGGELLGVDRIGFSYRRGDGLNIWRLMF SFPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35715; Mature: 35584
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHFFSRLPLCLSLTCLVFLSIVPAVFANSESPANTFTPATLTSASQANDAGVSVDPVSI CCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEE SHVPSSNANGSNPIELSSNPNSVYAFGSYLGTGVYRAANQNATVVSIPLSFDLKKDSGSQ EECCCCCCCCCCCEEECCCCCEEEEEHHHHHCHHEEECCCCCEEEEEEEEEEEECCCCCC TWLRLPISFGFFDYLAKDITEGELPSSIGTMTITPGFEHHWQASENTRMEGYLDIGFGTN EEEEEEEHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCC FDKNDNVAIIASGISSLYDFTLAGQDAVWVSRLRFAGYSEHYGKFADQFAVLQTGVDLGL CCCCCCEEEEECCHHHHHEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC APRWQWWDLQVQPRIFAVGYWYFNELRFISEIEQDTIVSGSYEAGFSLAFSKPLGGELLG CCCCEEEEEEECCEEEEEEEHHHHHHHHHHHHCHHHEECCCCCCCEEEEECCCCCCCEEE VDRIGFSYRRGDGLNIWRLMFSFPI EECCCCEEECCCCCEEEEEEECCCC >Mature Secondary Structure SHFFSRLPLCLSLTCLVFLSIVPAVFANSESPANTFTPATLTSASQANDAGVSVDPVSI CCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEE SHVPSSNANGSNPIELSSNPNSVYAFGSYLGTGVYRAANQNATVVSIPLSFDLKKDSGSQ EECCCCCCCCCCCEEECCCCCEEEEEHHHHHCHHEEECCCCCEEEEEEEEEEEECCCCCC TWLRLPISFGFFDYLAKDITEGELPSSIGTMTITPGFEHHWQASENTRMEGYLDIGFGTN EEEEEEEHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCC FDKNDNVAIIASGISSLYDFTLAGQDAVWVSRLRFAGYSEHYGKFADQFAVLQTGVDLGL CCCCCCEEEEECCHHHHHEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC APRWQWWDLQVQPRIFAVGYWYFNELRFISEIEQDTIVSGSYEAGFSLAFSKPLGGELLG CCCCEEEEEEECCEEEEEEEHHHHHHHHHHHHCHHHEECCCCCCCEEEEECCCCCCCEEE VDRIGFSYRRGDGLNIWRLMFSFPI EECCCCEEECCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA