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The map label for this gene is nrdD [H]

Identifier: 160874804

GI number: 160874804

Start: 2034902

End: 2037019

Strand: Direct

Name: nrdD [H]

Synonym: Sbal195_1687

Alternate gene names: 160874804

Gene position: 2034902-2037019 (Clockwise)

Preceding gene: 160874803

Following gene: 160874805

Centisome position: 38.05

GC content: 47.45

Gene sequence:

>2118_bases
ATGCCAGTCGTAATTAAGCGTGATGGTTGCCGCACACCTTTTGATGAAACAAGGATACGGGATGCAGTGAATGCCGCTGC
AAACTCAGTTGGAATAGAAGATGGCGACTATGCAGCGACAGTGGCAGCGTGTATCAGTCAAAGCGTCGCGACCTTAACCG
AAGTTGATATCCATCACCTACAGGATGCGGTGGAGAATTTACTGATGGAAGGGCCGTACAAATCATTAGCGCGGGTGTAT
ATCGAATACCGTCACGACCGAGATGTGTGCCGTGAAGCGACCAGTAAATTAAACCTCGAAATCCGTGGTTTAGTCGAGCA
AAGCAATGCGGCGTTACTCAATGAAAATGCCAATAAAGATTCGAAAGTTATCCCAACTCAGCGGGATTTGCTCGCAGGCA
TAGTCGCCAAACATTATGCCAAGAGTCATATCTTGCCAAAGGATGTGGTTGCTGCCCATGAAGCGGGCGAGATCCACTAC
CACGACTTAGATTACTCACCATTTTTCCCGATGTTTAACTGCATGCTGATTGATTTGGCTGGCATGTTGACCCATGGCTT
TAAAATGGGCAATGCCGAAATCGAAACCCCTAAGTCTATTTCAACGGCGACAGCCGTCACCGCGCAGATCATTGCCCAAG
TGGCGAGCCATATTTATGGCGGCACGACCATTAATCGTATCGACGAAGTGTTAGCGCCATTTGTTGCTAAGAGCTACGAC
AAACATTACCAAATCGCCCTGAATTGGAAGATCACCGACGCCAAAGCTTTTGCCACGGCGCAAACTGAAAAAGAATGTCA
CGATGCATTTCAGTCTTTGGAGTATGAGGTTAATACCTTGCATACCGCCAACGGCCAAACACCGTTCGTGACCTTTGGCT
TTGGGTTAGGCACATCATGGGAATCCCGCTTAATTCAGCAATCTATGCTGAAAGTACGGATGGCGGGACTAGGTAAAAAT
CGCAAGACGGCAGTTTTCCCTAAGTTAGTGTTTGCGATTCGCGATGGCATTAATCACAAGACTGGCGATTGCAATTACGA
TGTCAAACAGATGGCACTCAAATGTGCGACTATGCGCATGTATCCCGACATTCTCAATTACGAGCAAGTCGAGAAAGTCA
CAGGTTCATTTAAAACCCCAATGGGCTGCCGCAGCTTTTTAGGCACCTACGAGGAAAATGGCGAACTCGTGCATGAAGGG
CGCAATAATCTCGGGGTAGTGAGCTTAAACTTGCCGCGGATTGCTTTAGAAGCCAAGGGCGATGAAGCTGAATTTTATCG
TCTTTTAGATGACAGATTAGTCTTAGCCCGTAAAGCGCTGGATACTCGTATTGAGCGACTCAATGGCGTCAAAGCCCGCG
TGGCACCTATCCTCTATATGGAAGGTGCCTGTGGCGTGCGCTTGCGCGCCGATGATGATGTTTCTCAAATTTTTAAAAAT
GGCCGGGCGTCGATTTCACTCGGTTACATTGGCCTGCATGAAACCATGAATGCACTCTATGGCACCCAAACCCATGTATT
TGACGATGCACAATTAAGGGACAAAGCCGTCGCTATTGTTGCCTATCTTAAAGCCGCCACGGATGCGTGGAAGGCTGAAA
CAGGTTATGGCTTTAGTCTGTATAGCACGCCAAGTGAGAGTCTCTGCAGCCGTTTTTGTAAACTGGATGCGAAGCAATTT
GGCCTAGTCACAGGGGTGACGGACAAGGGCTATTACACTAATAGTTTTCACCTTGATGTGGAAAAAAGTGTAAATCCTTA
CGATAAAATTGATTTTGAACAGCCATATCCTGCTATCGCGAACGGCGGCTTTATTTGTTATGGCGAATATCCAAACATGC
AGCATAACCTCGAAGCGCTGGAAAACGTGTGGGATTATAGTTATAGCCGCGTGCCTTACTATGGCACTAACACGCCAATT
GATGAATGCTACGACTGTGGCTTTACTGGCGAATTTAGCTGTACCAGTAAAGGATTCACTTGCCCTAAGTGCGGCAACCA
TGAGCCAAGTCGAGTGTCAGTGACGCGCCGAGTGTGCGGTTACTTAGGCAGCCCAGATGCGCGGCCCTTCAATTATGGTA
AACAGGAAGAAGTAAAACGTAGGATCAAACATTTGTAA

Upstream 100 bases:

>100_bases
CACCGTCGTTGTAGCCTAATGCTCTACATATTGTGTTTTATGCTTTTAAAATCACTAGATGTAGTGTTAATTTTTAGGCG
AGATGGAGAGGAACTGAACA

Downstream 100 bases:

>100_bases
CACTATTATTTTATTCTGCTTGTTAGACTTATTCCGTGGCATCACGTGGCATAAATGGTGCCATGGGATAAGTCCCAATG
TTAAAAGATGAAATGCACTA

Product: anaerobic ribonucleoside triphosphate reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 705; Mature: 704

Protein sequence:

>705_residues
MPVVIKRDGCRTPFDETRIRDAVNAAANSVGIEDGDYAATVAACISQSVATLTEVDIHHLQDAVENLLMEGPYKSLARVY
IEYRHDRDVCREATSKLNLEIRGLVEQSNAALLNENANKDSKVIPTQRDLLAGIVAKHYAKSHILPKDVVAAHEAGEIHY
HDLDYSPFFPMFNCMLIDLAGMLTHGFKMGNAEIETPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVAKSYD
KHYQIALNWKITDAKAFATAQTEKECHDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQQSMLKVRMAGLGKN
RKTAVFPKLVFAIRDGINHKTGDCNYDVKQMALKCATMRMYPDILNYEQVEKVTGSFKTPMGCRSFLGTYEENGELVHEG
RNNLGVVSLNLPRIALEAKGDEAEFYRLLDDRLVLARKALDTRIERLNGVKARVAPILYMEGACGVRLRADDDVSQIFKN
GRASISLGYIGLHETMNALYGTQTHVFDDAQLRDKAVAIVAYLKAATDAWKAETGYGFSLYSTPSESLCSRFCKLDAKQF
GLVTGVTDKGYYTNSFHLDVEKSVNPYDKIDFEQPYPAIANGGFICYGEYPNMQHNLEALENVWDYSYSRVPYYGTNTPI
DECYDCGFTGEFSCTSKGFTCPKCGNHEPSRVSVTRRVCGYLGSPDARPFNYGKQEEVKRRIKHL

Sequences:

>Translated_705_residues
MPVVIKRDGCRTPFDETRIRDAVNAAANSVGIEDGDYAATVAACISQSVATLTEVDIHHLQDAVENLLMEGPYKSLARVY
IEYRHDRDVCREATSKLNLEIRGLVEQSNAALLNENANKDSKVIPTQRDLLAGIVAKHYAKSHILPKDVVAAHEAGEIHY
HDLDYSPFFPMFNCMLIDLAGMLTHGFKMGNAEIETPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVAKSYD
KHYQIALNWKITDAKAFATAQTEKECHDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQQSMLKVRMAGLGKN
RKTAVFPKLVFAIRDGINHKTGDCNYDVKQMALKCATMRMYPDILNYEQVEKVTGSFKTPMGCRSFLGTYEENGELVHEG
RNNLGVVSLNLPRIALEAKGDEAEFYRLLDDRLVLARKALDTRIERLNGVKARVAPILYMEGACGVRLRADDDVSQIFKN
GRASISLGYIGLHETMNALYGTQTHVFDDAQLRDKAVAIVAYLKAATDAWKAETGYGFSLYSTPSESLCSRFCKLDAKQF
GLVTGVTDKGYYTNSFHLDVEKSVNPYDKIDFEQPYPAIANGGFICYGEYPNMQHNLEALENVWDYSYSRVPYYGTNTPI
DECYDCGFTGEFSCTSKGFTCPKCGNHEPSRVSVTRRVCGYLGSPDARPFNYGKQEEVKRRIKHL
>Mature_704_residues
PVVIKRDGCRTPFDETRIRDAVNAAANSVGIEDGDYAATVAACISQSVATLTEVDIHHLQDAVENLLMEGPYKSLARVYI
EYRHDRDVCREATSKLNLEIRGLVEQSNAALLNENANKDSKVIPTQRDLLAGIVAKHYAKSHILPKDVVAAHEAGEIHYH
DLDYSPFFPMFNCMLIDLAGMLTHGFKMGNAEIETPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVAKSYDK
HYQIALNWKITDAKAFATAQTEKECHDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQQSMLKVRMAGLGKNR
KTAVFPKLVFAIRDGINHKTGDCNYDVKQMALKCATMRMYPDILNYEQVEKVTGSFKTPMGCRSFLGTYEENGELVHEGR
NNLGVVSLNLPRIALEAKGDEAEFYRLLDDRLVLARKALDTRIERLNGVKARVAPILYMEGACGVRLRADDDVSQIFKNG
RASISLGYIGLHETMNALYGTQTHVFDDAQLRDKAVAIVAYLKAATDAWKAETGYGFSLYSTPSESLCSRFCKLDAKQFG
LVTGVTDKGYYTNSFHLDVEKSVNPYDKIDFEQPYPAIANGGFICYGEYPNMQHNLEALENVWDYSYSRVPYYGTNTPID
ECYDCGFTGEFSCTSKGFTCPKCGNHEPSRVSVTRRVCGYLGSPDARPFNYGKQEEVKRRIKHL

Specific function: Unknown

COG id: COG1328

COG function: function code F; Oxygen-sensitive ribonucleoside-triphosphate reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glycine radical domain [H]

Homologues:

Organism=Escherichia coli, GI1790686, Length=705, Percent_Identity=79.0070921985816, Blast_Score=1191, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005144
- InterPro:   IPR001150
- InterPro:   IPR019777
- InterPro:   IPR012833 [H]

Pfam domain/function: PF03477 ATP-cone; PF01228 Gly_radical [H]

EC number: =1.17.4.2 [H]

Molecular weight: Translated: 78556; Mature: 78425

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: PS51161 ATP_CONE ; PS00850 GLY_RADICAL_1 ; PS51149 GLY_RADICAL_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVVIKRDGCRTPFDETRIRDAVNAAANSVGIEDGDYAATVAACISQSVATLTEVDIHHL
CCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QDAVENLLMEGPYKSLARVYIEYRHDRDVCREATSKLNLEIRGLVEQSNAALLNENANKD
HHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEEHCCCCCEEECCCCCCC
SKVIPTQRDLLAGIVAKHYAKSHILPKDVVAAHEAGEIHYHDLDYSPFFPMFNCMLIDLA
CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHH
GMLTHGFKMGNAEIETPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVAKSYD
HHHHHCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
KHYQIALNWKITDAKAFATAQTEKECHDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSW
CCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCEEEEECCCCCCH
ESRLIQQSMLKVRMAGLGKNRKTAVFPKLVFAIRDGINHKTGDCNYDVKQMALKCATMRM
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
YPDILNYEQVEKVTGSFKTPMGCRSFLGTYEENGELVHEGRNNLGVVSLNLPRIALEAKG
HHHHCCHHHHHHHHCCCCCCHHHHHHHCCCCCCCCEEECCCCCEEEEEECCCEEEEECCC
DEAEFYRLLDDRLVLARKALDTRIERLNGVKARVAPILYMEGACGVRLRADDDVSQIFKN
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCEEEEECCCCCEEEECCCHHHHHHHC
GRASISLGYIGLHETMNALYGTQTHVFDDAQLRDKAVAIVAYLKAATDAWKAETGYGFSL
CCCEEEEEEEEHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
YSTPSESLCSRFCKLDAKQFGLVTGVTDKGYYTNSFHLDVEKSVNPYDKIDFEQPYPAIA
ECCCHHHHHHHHHHCCHHHHCEEEECCCCCEEECEEEEEECCCCCCCCCCCCCCCCCCCC
NGGFICYGEYPNMQHNLEALENVWDYSYSRVPYYGTNTPIDECYDCGFTGEFSCTSKGFT
CCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC
CPKCGNHEPSRVSVTRRVCGYLGSPDARPFNYGKQEEVKRRIKHL
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
PVVIKRDGCRTPFDETRIRDAVNAAANSVGIEDGDYAATVAACISQSVATLTEVDIHHL
CEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QDAVENLLMEGPYKSLARVYIEYRHDRDVCREATSKLNLEIRGLVEQSNAALLNENANKD
HHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEEHCCCCCEEECCCCCCC
SKVIPTQRDLLAGIVAKHYAKSHILPKDVVAAHEAGEIHYHDLDYSPFFPMFNCMLIDLA
CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHH
GMLTHGFKMGNAEIETPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVAKSYD
HHHHHCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
KHYQIALNWKITDAKAFATAQTEKECHDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSW
CCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCEEEEECCCCCCH
ESRLIQQSMLKVRMAGLGKNRKTAVFPKLVFAIRDGINHKTGDCNYDVKQMALKCATMRM
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
YPDILNYEQVEKVTGSFKTPMGCRSFLGTYEENGELVHEGRNNLGVVSLNLPRIALEAKG
HHHHCCHHHHHHHHCCCCCCHHHHHHHCCCCCCCCEEECCCCCEEEEEECCCEEEEECCC
DEAEFYRLLDDRLVLARKALDTRIERLNGVKARVAPILYMEGACGVRLRADDDVSQIFKN
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCEEEEECCCCCEEEECCCHHHHHHHC
GRASISLGYIGLHETMNALYGTQTHVFDDAQLRDKAVAIVAYLKAATDAWKAETGYGFSL
CCCEEEEEEEEHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
YSTPSESLCSRFCKLDAKQFGLVTGVTDKGYYTNSFHLDVEKSVNPYDKIDFEQPYPAIA
ECCCHHHHHHHHHHCCHHHHCEEEECCCCCEEECEEEEEECCCCCCCCCCCCCCCCCCCC
NGGFICYGEYPNMQHNLEALENVWDYSYSRVPYYGTNTPIDECYDCGFTGEFSCTSKGFT
CCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC
CPKCGNHEPSRVSVTRRVCGYLGSPDARPFNYGKQEEVKRRIKHL
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8421692; 7610040; 9278503; 8083158; 7852304 [H]