| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yfcA [C]
Identifier: 160874792
GI number: 160874792
Start: 2020381
End: 2021151
Strand: Direct
Name: yfcA [C]
Synonym: Sbal195_1675
Alternate gene names: 160874792
Gene position: 2020381-2021151 (Clockwise)
Preceding gene: 160874790
Following gene: 160874793
Centisome position: 37.78
GC content: 47.47
Gene sequence:
>771_bases ATGGAATTTGAACTGACTCTACAAATCGCAGCGATACTTTTTGCCGTCGCTATGGTGGCTGGTTTTATCGACTCTATCGC CGGTGGTGGTGGCTTGTTGACGATCCCTGCACTCATGTGGGCAGGCTTGCCGCCTGCGGTTGCCTTAGGCACAAATAAGC TGCAGGCCTGTGGTGGTAGTTTTTTTGCGAGCTTGTATTTCGTCCGCAAAGGGTTAGTGGATCTTAAATCCGTAAAGTTA GCTTTGATTTGTGCGTTTATCGGCGCGGCATTGGGAACGATTCTCGTTCAACTCGTCGATACTAAAGTGCTGGAGTTAAT GTTGCCATTCTTGATTTTGGCAATTGGTTGTTACTTCTTATTTTCGAAAAAGATTTCTGAAGACGATAAGCATCAAGTAC TGACACCTACCGCGTTTGCGTTCACTGCCGCGTTAGGTGTGGGATTGTACGATGGTTTTTTTGGTCCTGGCACTGGCAGC TTTTTTGCGCTGGCGTTTGTATCGTTAGCGGGGTTTGGTCTGGCTAAGGCTACGGCTCACGCGAAACTACTTAATTTCTC AACCAATATTGCTTCACTGATCTTCTTCGCCTTGGGCGGCAAAGTGATTTGGTTATTGGGGTTGGTTATGCTCGTAGGAC AAGCGATTGGCGCAACTTTGGGTTCTCGTCTGGTTGTGACTAAAGGCACGAAGATCATCAAGCCGCTCGTCGTGACTATG TCCCTTGCCATGAGCTTTAAACTCCTCGCAACGCAATATCACTTGTTCTAA
Upstream 100 bases:
>100_bases CTCACGCAGTGGCGACAATAACTCCTTTGCGTTTATTTGGCAAACGCAGTCTAATGCTGAGCAATTACTCCCTTTTTTAT CAGAAGAATAATAAATCATT
Downstream 100 bases:
>100_bases TTGATTGTTTCTTATCAATAAGCGCAGCCTTAAACGGCGGATTAGTTAATTTTCGCGCGTAAGCTTAAGTTATTTTATTT TTATCTTATCTGAGTGACGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MEFELTLQIAAILFAVAMVAGFIDSIAGGGGLLTIPALMWAGLPPAVALGTNKLQACGGSFFASLYFVRKGLVDLKSVKL ALICAFIGAALGTILVQLVDTKVLELMLPFLILAIGCYFLFSKKISEDDKHQVLTPTAFAFTAALGVGLYDGFFGPGTGS FFALAFVSLAGFGLAKATAHAKLLNFSTNIASLIFFALGGKVIWLLGLVMLVGQAIGATLGSRLVVTKGTKIIKPLVVTM SLAMSFKLLATQYHLF
Sequences:
>Translated_256_residues MEFELTLQIAAILFAVAMVAGFIDSIAGGGGLLTIPALMWAGLPPAVALGTNKLQACGGSFFASLYFVRKGLVDLKSVKL ALICAFIGAALGTILVQLVDTKVLELMLPFLILAIGCYFLFSKKISEDDKHQVLTPTAFAFTAALGVGLYDGFFGPGTGS FFALAFVSLAGFGLAKATAHAKLLNFSTNIASLIFFALGGKVIWLLGLVMLVGQAIGATLGSRLVVTKGTKIIKPLVVTM SLAMSFKLLATQYHLF >Mature_256_residues MEFELTLQIAAILFAVAMVAGFIDSIAGGGGLLTIPALMWAGLPPAVALGTNKLQACGGSFFASLYFVRKGLVDLKSVKL ALICAFIGAALGTILVQLVDTKVLELMLPFLILAIGCYFLFSKKISEDDKHQVLTPTAFAFTAALGVGLYDGFFGPGTGS FFALAFVSLAGFGLAKATAHAKLLNFSTNIASLIFFALGGKVIWLLGLVMLVGQAIGATLGSRLVVTKGTKIIKPLVVTM SLAMSFKLLATQYHLF
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0721 family [H]
Homologues:
Organism=Escherichia coli, GI1788667, Length=242, Percent_Identity=58.2644628099173, Blast_Score=259, Evalue=2e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002781 [H]
Pfam domain/function: PF01925 DUF81 [H]
EC number: NA
Molecular weight: Translated: 26851; Mature: 26851
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFELTLQIAAILFAVAMVAGFIDSIAGGGGLLTIPALMWAGLPPAVALGTNKLQACGGS CCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHCCCHHHHHHHH FFASLYFVRKGLVDLKSVKLALICAFIGAALGTILVQLVDTKVLELMLPFLILAIGCYFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSKKISEDDKHQVLTPTAFAFTAALGVGLYDGFFGPGTGSFFALAFVSLAGFGLAKATAH HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHH AKLLNFSTNIASLIFFALGGKVIWLLGLVMLVGQAIGATLGSRLVVTKGTKIIKPLVVTM HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHH SLAMSFKLLATQYHLF HHHHHHHHHHHHHHCC >Mature Secondary Structure MEFELTLQIAAILFAVAMVAGFIDSIAGGGGLLTIPALMWAGLPPAVALGTNKLQACGGS CCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHCCCHHHHHHHH FFASLYFVRKGLVDLKSVKLALICAFIGAALGTILVQLVDTKVLELMLPFLILAIGCYFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSKKISEDDKHQVLTPTAFAFTAALGVGLYDGFFGPGTGSFFALAFVSLAGFGLAKATAH HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHH AKLLNFSTNIASLIFFALGGKVIWLLGLVMLVGQAIGATLGSRLVVTKGTKIIKPLVVTM HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHH SLAMSFKLLATQYHLF HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]