| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is pspB [C]
Identifier: 160874758
GI number: 160874758
Start: 1982814
End: 1983047
Strand: Direct
Name: pspB [C]
Synonym: Sbal195_1641
Alternate gene names: 160874758
Gene position: 1982814-1983047 (Clockwise)
Preceding gene: 160874757
Following gene: 160874759
Centisome position: 37.08
GC content: 47.01
Gene sequence:
>234_bases ATGGACGTGCTAATGGCGCCGATTATTATTTTCATGGTGATAGTCGCGCCAATATGGTTAGTTCTTCATTATCGCAGTAA GCGACAAGTGAGCCAGGGACTCACTGAGGAAGAGTTTTCACAACTCAATGACTTGATATCCAAGGCCGATAAAATGGCGG CGCGTATCGAGACCTTAGAGGCCATTCTGGATACAGAATCGCCCGAATGGAGGGGGAAACATGAGAGGATCTAA
Upstream 100 bases:
>100_bases AAGATTCTGTGAATGCAGAACTGGCAGCGCTAAAAGCCAAGGTAAAAGGTAAAGCGCCAACTAAGTCAAAAGAATAACAA TTCAGAGGTGAGTTATGGAT
Downstream 100 bases:
>100_bases TGGCCGTACTTTGTACCGCATTCCCCAGTCAGGCAAAATAGCGGGTGTATGTGCAGGGATTGCCGAGTACTTTGCGATTG AAACTTGGTTAGTGCGGGTA
Product: phage shock protein B
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MDVLMAPIIIFMVIVAPIWLVLHYRSKRQVSQGLTEEEFSQLNDLISKADKMAARIETLEAILDTESPEWRGKHERI
Sequences:
>Translated_77_residues MDVLMAPIIIFMVIVAPIWLVLHYRSKRQVSQGLTEEEFSQLNDLISKADKMAARIETLEAILDTESPEWRGKHERI >Mature_77_residues MDVLMAPIIIFMVIVAPIWLVLHYRSKRQVSQGLTEEEFSQLNDLISKADKMAARIETLEAILDTESPEWRGKHERI
Specific function: The Phage Shock Protein (Psp) Operon (Pspabce) May Play A Significant Role In The Competition For Survival Under Nutrient- Or Energy-Limited Conditions. Pspb Is Involved In Transcription Regulation. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787563, Length=70, Percent_Identity=44.2857142857143, Blast_Score=60, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8923; Mature: 8923
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVLMAPIIIFMVIVAPIWLVLHYRSKRQVSQGLTEEEFSQLNDLISKADKMAARIETLE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AILDTESPEWRGKHERI HHHCCCCCCCCCCCCCC >Mature Secondary Structure MDVLMAPIIIFMVIVAPIWLVLHYRSKRQVSQGLTEEEFSQLNDLISKADKMAARIETLE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AILDTESPEWRGKHERI HHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA