Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160874696
Identifier: 160874696
GI number: 160874696
Start: 1900985
End: 1902418
Strand: Direct
Name: 160874696
Synonym: Sbal195_1579
Alternate gene names: NA
Gene position: 1900985-1902418 (Clockwise)
Preceding gene: 160874694
Following gene: 160874697
Centisome position: 35.55
GC content: 49.44
Gene sequence:
>1434_bases GTGAACCAAGATAACCTGCAGCAACAACTCACTTACTCACAGAAATTTAGCGAACTTAATCAGTTGCTTGAACAGAGTGC AGCCCTGTGGCAAGTGCGTGCATTTGAAGTGAACGCTTTACCTTGGGCACAGGATTTTCCGCAGTTGGCCGAAGCTGTGT GGGCGCTGGCTGACGATGAGCTTGATGGACTCGACGCCGAGCAATCTTTGCTGGTCAAGGCATTGTCACCGGCATTAAAC CACGATCTTAAGGCATTAGGCCAAGATTGGGACTTGTCATTGCTCACCGCATCCATTGCCGAACGCACGGTTTTTAATGA TAAGACAGTTAATGATAAGGCTGGCGTGGCTGAACCGTCGCTTGCGGATAGCACCGCAGCGCAGCAAGGCGGCTTGTCCT TTGACGATGAGGCGCATTTCAGTGCGCACATCAAAGGCCGTAAATGGCAGCAAATTACCGCCTTTGTGCAGCATTTACCC CAGCTTAATTTACCTGTGCTGGAATGGTGTGCGGGTAAAGGGCATTTGGGCCGCTTGATTGCTAAAGCCCGCGGCGCCGA AGTGGTGAGCTTAGAATGGCAAGCGCCATTATGTGAAGCAGGACAGGCCTTTGCCGATAAGTGGCAGTTGTCACAAACCT TTATTTGTGCCGATGCCTTTGCTATTTGTGCCGATGCCTTTGCTATTGGTGCAGAACATGCTGCGACAAACACATCTACA ACGACATCTATAACCACATCCATTACTACAGTTGAAGCACCAGCTCAACACGCCGCAAAAGCCAATCCGTTAATCGCAAG GCAGCAAGCGGTTGCTTTGCATGCCTGCGGTGATTTGCATGTTCGGCTGTTAACGCTGGCGGCCGAGGCGGGCACGCAGG CGCTGGCGATTTCTCCCTGTTGTTATCATTTAATTCAAGCGAGCCATTATCAGCCGTTATCCAATCTTGCTCAGCAGAGC AGCCTAAAACTCAGTCGCCATGATTTACAGTTACCGCTGCAGCAGAGCGTGATCGCCAATCCCAAACAGCAGGCGCTGCG CCATCAAGAAATCGCGTGGCGCTTAGGCTTTGATGCACTGCAACGTCAATGTCGACAAATCGACGCATATTTACCTTTGC CCTCGTTAAAGCAGAGTCAGTTGAGCGGCAGTTTTATTGATTTTTGCCTGTGGGCGGCTGAGATTAAGGCGGTTAATTTA GCCAAAAACAAGGATTTTGAGGCTTGGCTTGAGATAGGGCGACAAAGACAACAATTAACTCGCCGCATCGATTTAGTGGC GCATTTGTTTCGTAGCGTACTCGAGCAATGGTTAATCTTAGATCGCGCTTGTTTTTTGCAGGAACAAGGATATGGTGTTT GCGTGGGTGAATTTTGTGCAAACAGCGTCACACCAAGAAATTCGCTGATTTTAGCGCAAAAAATGTCAGTATAA
Upstream 100 bases:
>100_bases TTTAAAGGCCGCGATACTAACATTTTTTCGCATAAAGTCATCTTTAGGGCGCATTCCCTTGGCCTAAGGTGAGACAAGTA TTTTTTACACTGGGCATGAC
Downstream 100 bases:
>100_bases TTTTGAGTGTCTGAAAATATGCTGTACTGTGATGTTTTTTATGAAGTATTTCTATATTAGCGCATTTAAGTTTAGTGATA GTGAATTCAGGGCCGTCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 477; Mature: 477
Protein sequence:
>477_residues MNQDNLQQQLTYSQKFSELNQLLEQSAALWQVRAFEVNALPWAQDFPQLAEAVWALADDELDGLDAEQSLLVKALSPALN HDLKALGQDWDLSLLTASIAERTVFNDKTVNDKAGVAEPSLADSTAAQQGGLSFDDEAHFSAHIKGRKWQQITAFVQHLP QLNLPVLEWCAGKGHLGRLIAKARGAEVVSLEWQAPLCEAGQAFADKWQLSQTFICADAFAICADAFAIGAEHAATNTST TTSITTSITTVEAPAQHAAKANPLIARQQAVALHACGDLHVRLLTLAAEAGTQALAISPCCYHLIQASHYQPLSNLAQQS SLKLSRHDLQLPLQQSVIANPKQQALRHQEIAWRLGFDALQRQCRQIDAYLPLPSLKQSQLSGSFIDFCLWAAEIKAVNL AKNKDFEAWLEIGRQRQQLTRRIDLVAHLFRSVLEQWLILDRACFLQEQGYGVCVGEFCANSVTPRNSLILAQKMSV
Sequences:
>Translated_477_residues MNQDNLQQQLTYSQKFSELNQLLEQSAALWQVRAFEVNALPWAQDFPQLAEAVWALADDELDGLDAEQSLLVKALSPALN HDLKALGQDWDLSLLTASIAERTVFNDKTVNDKAGVAEPSLADSTAAQQGGLSFDDEAHFSAHIKGRKWQQITAFVQHLP QLNLPVLEWCAGKGHLGRLIAKARGAEVVSLEWQAPLCEAGQAFADKWQLSQTFICADAFAICADAFAIGAEHAATNTST TTSITTSITTVEAPAQHAAKANPLIARQQAVALHACGDLHVRLLTLAAEAGTQALAISPCCYHLIQASHYQPLSNLAQQS SLKLSRHDLQLPLQQSVIANPKQQALRHQEIAWRLGFDALQRQCRQIDAYLPLPSLKQSQLSGSFIDFCLWAAEIKAVNL AKNKDFEAWLEIGRQRQQLTRRIDLVAHLFRSVLEQWLILDRACFLQEQGYGVCVGEFCANSVTPRNSLILAQKMSV >Mature_477_residues MNQDNLQQQLTYSQKFSELNQLLEQSAALWQVRAFEVNALPWAQDFPQLAEAVWALADDELDGLDAEQSLLVKALSPALN HDLKALGQDWDLSLLTASIAERTVFNDKTVNDKAGVAEPSLADSTAAQQGGLSFDDEAHFSAHIKGRKWQQITAFVQHLP QLNLPVLEWCAGKGHLGRLIAKARGAEVVSLEWQAPLCEAGQAFADKWQLSQTFICADAFAICADAFAIGAEHAATNTST TTSITTSITTVEAPAQHAAKANPLIARQQAVALHACGDLHVRLLTLAAEAGTQALAISPCCYHLIQASHYQPLSNLAQQS SLKLSRHDLQLPLQQSVIANPKQQALRHQEIAWRLGFDALQRQCRQIDAYLPLPSLKQSQLSGSFIDFCLWAAEIKAVNL AKNKDFEAWLEIGRQRQQLTRRIDLVAHLFRSVLEQWLILDRACFLQEQGYGVCVGEFCANSVTPRNSLILAQKMSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52540; Mature: 52540
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQDNLQQQLTYSQKFSELNQLLEQSAALWQVRAFEVNALPWAQDFPQLAEAVWALADDE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHCCCC LDGLDAEQSLLVKALSPALNHDLKALGQDWDLSLLTASIAERTVFNDKTVNDKAGVAEPS CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC LADSTAAQQGGLSFDDEAHFSAHIKGRKWQQITAFVQHLPQLNLPVLEWCAGKGHLGRLI CCCHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHH AKARGAEVVSLEWQAPLCEAGQAFADKWQLSQTFICADAFAICADAFAIGAEHAATNTST HHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCC TTSITTSITTVEAPAQHAAKANPLIARQQAVALHACGDLHVRLLTLAAEAGTQALAISPC CCEEEEEEEEEECCHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECHH CYHLIQASHYQPLSNLAQQSSLKLSRHDLQLPLQQSVIANPKQQALRHQEIAWRLGFDAL HHHHHHHHCCCHHHHHHHHHCCHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHCHHHH QRQCRQIDAYLPLPSLKQSQLSGSFIDFCLWAAEIKAVNLAKNKDFEAWLEIGRQRQQLT HHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHH RRIDLVAHLFRSVLEQWLILDRACFLQEQGYGVCVGEFCANSVTPRNSLILAQKMSV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCCCCEEEEECCCC >Mature Secondary Structure MNQDNLQQQLTYSQKFSELNQLLEQSAALWQVRAFEVNALPWAQDFPQLAEAVWALADDE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHCCCC LDGLDAEQSLLVKALSPALNHDLKALGQDWDLSLLTASIAERTVFNDKTVNDKAGVAEPS CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC LADSTAAQQGGLSFDDEAHFSAHIKGRKWQQITAFVQHLPQLNLPVLEWCAGKGHLGRLI CCCHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHH AKARGAEVVSLEWQAPLCEAGQAFADKWQLSQTFICADAFAICADAFAIGAEHAATNTST HHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCC TTSITTSITTVEAPAQHAAKANPLIARQQAVALHACGDLHVRLLTLAAEAGTQALAISPC CCEEEEEEEEEECCHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECHH CYHLIQASHYQPLSNLAQQSSLKLSRHDLQLPLQQSVIANPKQQALRHQEIAWRLGFDAL HHHHHHHHCCCHHHHHHHHHCCHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHCHHHH QRQCRQIDAYLPLPSLKQSQLSGSFIDFCLWAAEIKAVNLAKNKDFEAWLEIGRQRQQLT HHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHH RRIDLVAHLFRSVLEQWLILDRACFLQEQGYGVCVGEFCANSVTPRNSLILAQKMSV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA