| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160874676
Identifier: 160874676
GI number: 160874676
Start: 1879193
End: 1879741
Strand: Reverse
Name: 160874676
Synonym: Sbal195_1559
Alternate gene names: NA
Gene position: 1879741-1879193 (Counterclockwise)
Preceding gene: 160874677
Following gene: 160874675
Centisome position: 35.15
GC content: 50.64
Gene sequence:
>549_bases ATGAACGAAATCGACATGATCATTGAACAAACCGACAACTGGGTCAAAAAAGTGATCATGAAATACAATATTTGCCCCTT CGCCAGACAAGAAGTCGAGCGCGGCAGTATTCGGTATCTAGTGGTGGAACAAACCAAAGTCAAACTCGTGCTCAAGGCAT TGATTGAAGAGTGCCAATACCTCGACGCCCACCCCGAAGCCGAAACCACACTGTTTATTCTGCCCCGAGGTTTTGAGGGT TTTTATGCCTATCTCGACCTCGTCGACATGGCAACCGATACGCTTATCGAGCATGAGTACGAAGGCACTTACCAACTCGC CACCTTCCACCCAGACTATTGTTTCGATGGTGAACCACAGGACGCGGCAGCCAACTTCACCAACCGCGGGCCCTACCCAA CCCTGCACATCATCCGCGAAGCCAGCATGGAGCTCGCTCTCGCCAGCTACACAGATCCCGAAACCATCCCAGAACGTAAC ATTGCCTTTTGCGAACGCAAAGGCAGCGACTTTTTCGTTAAGTTGTTAGCAGAGTGCATGGGGAAATAG
Upstream 100 bases:
>100_bases CCAACAGAAGATCTTCAATATCACTATGGCAGTCTTGCTTGTGGCGTCTATCATCCCTATGATCGCCCCCTAATTTTTGT CAGCACGAGCCACGACCACC
Downstream 100 bases:
>100_bases CTTAAGCGCCTCAGAAATAACTGAGAGAGATGGTAAATATAAGAAGTTGTAGAGTAATCACTTAACCTTGGTATCCAAAA ATTAAGCACTGTCACTCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MNEIDMIIEQTDNWVKKVIMKYNICPFARQEVERGSIRYLVVEQTKVKLVLKALIEECQYLDAHPEAETTLFILPRGFEG FYAYLDLVDMATDTLIEHEYEGTYQLATFHPDYCFDGEPQDAAANFTNRGPYPTLHIIREASMELALASYTDPETIPERN IAFCERKGSDFFVKLLAECMGK
Sequences:
>Translated_182_residues MNEIDMIIEQTDNWVKKVIMKYNICPFARQEVERGSIRYLVVEQTKVKLVLKALIEECQYLDAHPEAETTLFILPRGFEG FYAYLDLVDMATDTLIEHEYEGTYQLATFHPDYCFDGEPQDAAANFTNRGPYPTLHIIREASMELALASYTDPETIPERN IAFCERKGSDFFVKLLAECMGK >Mature_182_residues MNEIDMIIEQTDNWVKKVIMKYNICPFARQEVERGSIRYLVVEQTKVKLVLKALIEECQYLDAHPEAETTLFILPRGFEG FYAYLDLVDMATDTLIEHEYEGTYQLATFHPDYCFDGEPQDAAANFTNRGPYPTLHIIREASMELALASYTDPETIPERN IAFCERKGSDFFVKLLAECMGK
Specific function: Unknown
COG id: COG3310
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20996; Mature: 20996
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEIDMIIEQTDNWVKKVIMKYNICPFARQEVERGSIRYLVVEQTKVKLVLKALIEECQY CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHH LDAHPEAETTLFILPRGFEGFYAYLDLVDMATDTLIEHEYEGTYQLATFHPDYCFDGEPQ CCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC DAAANFTNRGPYPTLHIIREASMELALASYTDPETIPERNIAFCERKGSDFFVKLLAECM HHHCCCCCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHH GK CC >Mature Secondary Structure MNEIDMIIEQTDNWVKKVIMKYNICPFARQEVERGSIRYLVVEQTKVKLVLKALIEECQY CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHH LDAHPEAETTLFILPRGFEGFYAYLDLVDMATDTLIEHEYEGTYQLATFHPDYCFDGEPQ CCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC DAAANFTNRGPYPTLHIIREASMELALASYTDPETIPERNIAFCERKGSDFFVKLLAECM HHHCCCCCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHH GK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA