| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874656
Identifier: 160874656
GI number: 160874656
Start: 1854009
End: 1856603
Strand: Reverse
Name: 160874656
Synonym: Sbal195_1539
Alternate gene names: NA
Gene position: 1856603-1854009 (Counterclockwise)
Preceding gene: 160874657
Following gene: 160874655
Centisome position: 34.72
GC content: 44.39
Gene sequence:
>2595_bases ATGAATAAGCTTGAGGCATCAAGAAATATACGGGCAGTGATTGAAAAAAGCTTACCCGTGAGCACGTCACCCCTTGCCAT ATTTACTTACCAGTGTTGGGTTAAAACCAGCGCGGGTGGGCGTGTGTTCCATTATAAAACCGATCGAGAAGATACCTATT TCGCGGTGGACATTAATTCACTGGGGCATATTGAATGCGTGATTAATACCACCTTGCTGCGGGTTGAGGCAATTTCAACC TTAGGTGGACTCAACGATGGTCAGTGGCACTTATTGTCTATCTGCCATGAATACCATGAAATCAGTTGTTATGTGGATGG TGAAATTACCCATACACAACTCAATAATCTGTCACTGGTTGCCGACAATGAATTTTTAATTGAAAACGTGTCTTTACCGA ATCATCGCGATACACATTTCGATGGTGAAATATTTGGCATCACCATACTCAATCGATTATTAACCCGAACTGAAATCGTT GACTATTACCGTAATCCAGCGCAACAAAGATCGATTAGCGAAAATAACCTTTACATTTATCAGCATCAAGATGCACATAA TATTCGTGGTGAAAACTTTATTCCACTTAAAAGACAAAAAGTGCTGCTGGTCATATTTAATGATACTGAACATCAATTCA TAAAAACCACTACGGATAGCAACACCTATAATCAACAACTGCCTAAGATTATTCCGCCCCACGAACGCCGAGCCTATATT ATTGAATGTAACTATAACACTTGGCCTAATTTTAGTTATTTAGTGAATTACACGGCGAGTAATCAAGCGGATATTACACT CAATATTGAAGTGTTTAAATCGCTGACGGCCTATCGTTCGAATATTAAAGTGACAGTCGCGAATGAACTCGAACGGGATT GTTTGATTATTCAATCAACCGAAGAAGAATTAAGTGCTGAAGTGCGTATTAGTGAAAACTTAGTGATCACTCAAGCCAAA AACTTTGTTAATTTCATCAATGAAGTTCGCGCACACATTCCGGCCGATAATATTATTACCGGTGGCCATTATTATAGTGA GCAGCAACTCTCGATCAGCACAGGTAAGCAAATGATTGCCTATCAACAGGCTTGCCAACTGTTCAACCGCAGGTTACAAA AAAAGCCACTGGCGATCATCAAATGCACGTCAACTGAAGAAGTCAAAATCGCCTATAAGGCGGCCATCGATTATAACTTG CCAATCAGCGTGCGCTCGGGTGGGAATGATCACGAAGGTGAAAGCACTGAAACGAATACCGTAGTGTTAGATCTGTTGAA GATGGATAGCCTCACTTTAGATCCCATCACAGGTATTGCGGCCATTGGCCCAGGCAATCGCTTTATCAATCTCACCACTG CCCTTGCGAAAAAAGGCGTGATGATCCCCCATGGCACTAGTGGCAACGTTGCCTTAGCGGGATTTATTATGGGCGGCGGC TCAGGACCTTGGACCCGCAAATACGGCATGTGCTGCGAATCCCTATTACAGGCAGAAATCGTCCTCGGCATTGGTGAAAC CCAAGTCGTCTCGGTTGCCAATAAACCAGAGTTACTCTGGGCGCTCAAGGGTGGCGGCGGATTAAGTTACGGCATAGTGA CCCGCTTTTTTGTGCAAACCTTTCCACTACCGCCTTGCCTTATCAAGTTTGAATTAGAGTGGAATTGCTATGATAAACAA ACCCAAGAACTCATTGAGTACACCCCAACCAAAGACATTTTACAGCGCTGGGAAGCCATCATTAATGCCGACAGCACAGG CTGTTTGATTGGCACCAATCTCAAGATAAATGCCAGACATTTACCCGCAGAACAACACAAAACGACTGACATAGACACTG AGTCGATTAAGCATAACTGCTTGATGTATGGCTTTTGGGAAGGCAATTCAGCCAGTCTGAATCACTTTATCCAGACACAA TTTAATGAGTTTGACCTAGTCCCCAATGATATTCGCATCGAGGGTATGGGCGGACTCACCAAAGCCTACGGTGAAAACTT AATGGCCAATTGGGAAAGGGAATCTTTTCATCATCTGCAAGCGGACTTGCAAGGCATAAACCGCTCACCGACGCCACCCG ATTTGGATGAGCCCGCGCCCCATAAAGTTACCTCGCGCTTAGTCAATCAAACGGGGCTCAGGGACGGTTATAAGCCACTG CTCGAAAGCTTAACTTCTCGCTATGTGCTTGAAGGTAATCGCCAATTGGGGCTATTTACCTATGTTACCCTTGGCGCCAT TGCGGGCGATTATTATCGCACTATGGGCGAAGAGCAAAAGAGCCGCAGCGCCTTCCCCTACAAGGACAGACAATACACGA TTCAATATCAAACTTGGTGGAATAACGCGCTGCAAGAGAAACAACAATTGCAGGATAGCCAAGTGTTTACTCGCATCAAT CGTGCACTCGATTGGATTGATGCCAGCCGAAATTATGACATCCCCAACACCTCAGGCGCCTTTATCAGCTTCAAAGATAA AGCCATCCCCACTGATGTGTACTTCGACCATAACTACGCCGCGTTAAAACGGATTAAGGCGGCCTACAGCCAAGATAGCT TTAACCATTTCCGCTCACGTAAAAGCATTATTTAG
Upstream 100 bases:
>100_bases CTTAGTTACCCGCGATGGATTAATAACGGGATGAATTACCCCAGTAGCGCTTTAGCGCACTGAGGTAAAACACGCAAAGC ACACGAAAGGACGCACGAAT
Downstream 100 bases:
>100_bases TTAATATATCGGCATAGCCTAGGGTGAGTTTTTAAGGCAAAATCGACGCCGTCCACAGGACGGTGTCGCCCCTTAACTCT CTGTTCAATCTGTTGTAGGT
Product: FAD linked oxidase domain-containing protein
Products: NA
Alternate protein names: 6-HDNO [H]
Number of amino acids: Translated: 864; Mature: 864
Protein sequence:
>864_residues MNKLEASRNIRAVIEKSLPVSTSPLAIFTYQCWVKTSAGGRVFHYKTDREDTYFAVDINSLGHIECVINTTLLRVEAIST LGGLNDGQWHLLSICHEYHEISCYVDGEITHTQLNNLSLVADNEFLIENVSLPNHRDTHFDGEIFGITILNRLLTRTEIV DYYRNPAQQRSISENNLYIYQHQDAHNIRGENFIPLKRQKVLLVIFNDTEHQFIKTTTDSNTYNQQLPKIIPPHERRAYI IECNYNTWPNFSYLVNYTASNQADITLNIEVFKSLTAYRSNIKVTVANELERDCLIIQSTEEELSAEVRISENLVITQAK NFVNFINEVRAHIPADNIITGGHYYSEQQLSISTGKQMIAYQQACQLFNRRLQKKPLAIIKCTSTEEVKIAYKAAIDYNL PISVRSGGNDHEGESTETNTVVLDLLKMDSLTLDPITGIAAIGPGNRFINLTTALAKKGVMIPHGTSGNVALAGFIMGGG SGPWTRKYGMCCESLLQAEIVLGIGETQVVSVANKPELLWALKGGGGLSYGIVTRFFVQTFPLPPCLIKFELEWNCYDKQ TQELIEYTPTKDILQRWEAIINADSTGCLIGTNLKINARHLPAEQHKTTDIDTESIKHNCLMYGFWEGNSASLNHFIQTQ FNEFDLVPNDIRIEGMGGLTKAYGENLMANWERESFHHLQADLQGINRSPTPPDLDEPAPHKVTSRLVNQTGLRDGYKPL LESLTSRYVLEGNRQLGLFTYVTLGAIAGDYYRTMGEEQKSRSAFPYKDRQYTIQYQTWWNNALQEKQQLQDSQVFTRIN RALDWIDASRNYDIPNTSGAFISFKDKAIPTDVYFDHNYAALKRIKAAYSQDSFNHFRSRKSII
Sequences:
>Translated_864_residues MNKLEASRNIRAVIEKSLPVSTSPLAIFTYQCWVKTSAGGRVFHYKTDREDTYFAVDINSLGHIECVINTTLLRVEAIST LGGLNDGQWHLLSICHEYHEISCYVDGEITHTQLNNLSLVADNEFLIENVSLPNHRDTHFDGEIFGITILNRLLTRTEIV DYYRNPAQQRSISENNLYIYQHQDAHNIRGENFIPLKRQKVLLVIFNDTEHQFIKTTTDSNTYNQQLPKIIPPHERRAYI IECNYNTWPNFSYLVNYTASNQADITLNIEVFKSLTAYRSNIKVTVANELERDCLIIQSTEEELSAEVRISENLVITQAK NFVNFINEVRAHIPADNIITGGHYYSEQQLSISTGKQMIAYQQACQLFNRRLQKKPLAIIKCTSTEEVKIAYKAAIDYNL PISVRSGGNDHEGESTETNTVVLDLLKMDSLTLDPITGIAAIGPGNRFINLTTALAKKGVMIPHGTSGNVALAGFIMGGG SGPWTRKYGMCCESLLQAEIVLGIGETQVVSVANKPELLWALKGGGGLSYGIVTRFFVQTFPLPPCLIKFELEWNCYDKQ TQELIEYTPTKDILQRWEAIINADSTGCLIGTNLKINARHLPAEQHKTTDIDTESIKHNCLMYGFWEGNSASLNHFIQTQ FNEFDLVPNDIRIEGMGGLTKAYGENLMANWERESFHHLQADLQGINRSPTPPDLDEPAPHKVTSRLVNQTGLRDGYKPL LESLTSRYVLEGNRQLGLFTYVTLGAIAGDYYRTMGEEQKSRSAFPYKDRQYTIQYQTWWNNALQEKQQLQDSQVFTRIN RALDWIDASRNYDIPNTSGAFISFKDKAIPTDVYFDHNYAALKRIKAAYSQDSFNHFRSRKSII >Mature_864_residues MNKLEASRNIRAVIEKSLPVSTSPLAIFTYQCWVKTSAGGRVFHYKTDREDTYFAVDINSLGHIECVINTTLLRVEAIST LGGLNDGQWHLLSICHEYHEISCYVDGEITHTQLNNLSLVADNEFLIENVSLPNHRDTHFDGEIFGITILNRLLTRTEIV DYYRNPAQQRSISENNLYIYQHQDAHNIRGENFIPLKRQKVLLVIFNDTEHQFIKTTTDSNTYNQQLPKIIPPHERRAYI IECNYNTWPNFSYLVNYTASNQADITLNIEVFKSLTAYRSNIKVTVANELERDCLIIQSTEEELSAEVRISENLVITQAK NFVNFINEVRAHIPADNIITGGHYYSEQQLSISTGKQMIAYQQACQLFNRRLQKKPLAIIKCTSTEEVKIAYKAAIDYNL PISVRSGGNDHEGESTETNTVVLDLLKMDSLTLDPITGIAAIGPGNRFINLTTALAKKGVMIPHGTSGNVALAGFIMGGG SGPWTRKYGMCCESLLQAEIVLGIGETQVVSVANKPELLWALKGGGGLSYGIVTRFFVQTFPLPPCLIKFELEWNCYDKQ TQELIEYTPTKDILQRWEAIINADSTGCLIGTNLKINARHLPAEQHKTTDIDTESIKHNCLMYGFWEGNSASLNHFIQTQ FNEFDLVPNDIRIEGMGGLTKAYGENLMANWERESFHHLQADLQGINRSPTPPDLDEPAPHKVTSRLVNQTGLRDGYKPL LESLTSRYVLEGNRQLGLFTYVTLGAIAGDYYRTMGEEQKSRSAFPYKDRQYTIQYQTWWNNALQEKQQLQDSQVFTRIN RALDWIDASRNYDIPNTSGAFISFKDKAIPTDVYFDHNYAALKRIKAAYSQDSFNHFRSRKSII
Specific function: Unknown
COG id: COG0277
COG function: function code C; FAD/FMN-containing dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012951 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR016168 - InterPro: IPR006094 - InterPro: IPR006093 [H]
Pfam domain/function: PF08031 BBE; PF01565 FAD_binding_4 [H]
EC number: =1.5.3.6 [H]
Molecular weight: Translated: 97991; Mature: 97991
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLEASRNIRAVIEKSLPVSTSPLAIFTYQCWVKTSAGGRVFHYKTDREDTYFAVDINS CCCCCCCCCHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCEEEEEECCCCCEEEEEEECC LGHIECVINTTLLRVEAISTLGGLNDGQWHLLSICHEYHEISCYVDGEITHTQLNNLSLV CCEEEEEEEEEEEEEEHHHHHCCCCCCCHHHHHHHHHHHEEEEEECCEEEEEECCCEEEE ADNEFLIENVSLPNHRDTHFDGEIFGITILNRLLTRTEIVDYYRNPAQQRSISENNLYIY ECCCEEEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEE QHQDAHNIRGENFIPLKRQKVLLVIFNDTEHQFIKTTTDSNTYNQQLPKIIPPHERRAYI EECCCCCCCCCCEECCCCCEEEEEEECCCCCEEEEEECCCCCHHHHCCCCCCCCCCEEEE IECNYNTWPNFSYLVNYTASNQADITLNIEVFKSLTAYRSNIKVTVANELERDCLIIQST EEECCCCCCCCEEEEEEECCCCCEEEEEHHHHHHHHHHHCCCEEEECCCCCCCEEEEECC EEELSAEVRISENLVITQAKNFVNFINEVRAHIPADNIITGGHYYSEQQLSISTGKQMIA HHHCCEEEEEECCEEEEEHHHHHHHHHHHHHHCCCCCEEECCEEECCCEEEHHCCHHHHH YQQACQLFNRRLQKKPLAIIKCTSTEEVKIAYKAAIDYNLPISVRSGGNDHEGESTETNT HHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEEEECCCCEEEECCCCCCCCCCCCCCE VVLDLLKMDSLTLDPITGIAAIGPGNRFINLTTALAKKGVMIPHGTSGNVALAGFIMGGG EEEEEECCCCCEECCCCCEEEECCCCCEEEEEHHHHHCCEEECCCCCCCEEEEEEEEECC SGPWTRKYGMCCESLLQAEIVLGIGETQVVSVANKPELLWALKGGGGLSYGIVTRFFVQT CCCCCHHHHHHHHHHHHEEEEEECCCCEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHH FPLPPCLIKFELEWNCYDKQTQELIEYTPTKDILQRWEAIINADSTGCLIGTNLKINARH CCCCCEEEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEECCEEEEEEC LPAEQHKTTDIDTESIKHNCLMYGFWEGNSASLNHFIQTQFNEFDLVPNDIRIEGMGGLT CCCHHCCCCCCCHHHCCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCEEEECCCCHH KAYGENLMANWERESFHHLQADLQGINRSPTPPDLDEPAPHKVTSRLVNQTGLRDGYKPL HHHCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHH LESLTSRYVLEGNRQLGLFTYVTLGAIAGDYYRTMGEEQKSRSAFPYKDRQYTIQYQTWW HHHHHCCEEECCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEEEEEEHHH NNALQEKQQLQDSQVFTRINRALDWIDASRNYDIPNTSGAFISFKDKAIPTDVYFDHNYA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEECCCHH ALKRIKAAYSQDSFNHFRSRKSII HHHHHHHHHCCCHHHHHHHHCCCC >Mature Secondary Structure MNKLEASRNIRAVIEKSLPVSTSPLAIFTYQCWVKTSAGGRVFHYKTDREDTYFAVDINS CCCCCCCCCHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCEEEEEECCCCCEEEEEEECC LGHIECVINTTLLRVEAISTLGGLNDGQWHLLSICHEYHEISCYVDGEITHTQLNNLSLV CCEEEEEEEEEEEEEEHHHHHCCCCCCCHHHHHHHHHHHEEEEEECCEEEEEECCCEEEE ADNEFLIENVSLPNHRDTHFDGEIFGITILNRLLTRTEIVDYYRNPAQQRSISENNLYIY ECCCEEEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEE QHQDAHNIRGENFIPLKRQKVLLVIFNDTEHQFIKTTTDSNTYNQQLPKIIPPHERRAYI EECCCCCCCCCCEECCCCCEEEEEEECCCCCEEEEEECCCCCHHHHCCCCCCCCCCEEEE IECNYNTWPNFSYLVNYTASNQADITLNIEVFKSLTAYRSNIKVTVANELERDCLIIQST EEECCCCCCCCEEEEEEECCCCCEEEEEHHHHHHHHHHHCCCEEEECCCCCCCEEEEECC EEELSAEVRISENLVITQAKNFVNFINEVRAHIPADNIITGGHYYSEQQLSISTGKQMIA HHHCCEEEEEECCEEEEEHHHHHHHHHHHHHHCCCCCEEECCEEECCCEEEHHCCHHHHH YQQACQLFNRRLQKKPLAIIKCTSTEEVKIAYKAAIDYNLPISVRSGGNDHEGESTETNT HHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEEEECCCCEEEECCCCCCCCCCCCCCE VVLDLLKMDSLTLDPITGIAAIGPGNRFINLTTALAKKGVMIPHGTSGNVALAGFIMGGG EEEEEECCCCCEECCCCCEEEECCCCCEEEEEHHHHHCCEEECCCCCCCEEEEEEEEECC SGPWTRKYGMCCESLLQAEIVLGIGETQVVSVANKPELLWALKGGGGLSYGIVTRFFVQT CCCCCHHHHHHHHHHHHEEEEEECCCCEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHH FPLPPCLIKFELEWNCYDKQTQELIEYTPTKDILQRWEAIINADSTGCLIGTNLKINARH CCCCCEEEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEECCEEEEEEC LPAEQHKTTDIDTESIKHNCLMYGFWEGNSASLNHFIQTQFNEFDLVPNDIRIEGMGGLT CCCHHCCCCCCCHHHCCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCEEEECCCCHH KAYGENLMANWERESFHHLQADLQGINRSPTPPDLDEPAPHKVTSRLVNQTGLRDGYKPL HHHCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHH LESLTSRYVLEGNRQLGLFTYVTLGAIAGDYYRTMGEEQKSRSAFPYKDRQYTIQYQTWW HHHHHCCEEECCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEEEEEEHHH NNALQEKQQLQDSQVFTRINRALDWIDASRNYDIPNTSGAFISFKDKAIPTDVYFDHNYA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEECCCHH ALKRIKAAYSQDSFNHFRSRKSII HHHHHHHHHCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3622516; 2680607; 2115879 [H]