| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is metA [H]
Identifier: 160874641
GI number: 160874641
Start: 1835509
End: 1836450
Strand: Direct
Name: metA [H]
Synonym: Sbal195_1524
Alternate gene names: 160874641
Gene position: 1835509-1836450 (Clockwise)
Preceding gene: 160874640
Following gene: 160874642
Centisome position: 34.33
GC content: 45.75
Gene sequence:
>942_bases ATGCCGGTTAGAATTCCAGATCATCTGCCCGCAGCAGAAGTGTTAGAGTCAGAAAATATTTTCGTTATGTCCGAGACGCG GGCGGCTAATCAAGATATCAGGCCGATGAAGGTGCTGATTTTGAACTTGATGCCGAACAAAATCGAGACAGAAACCCAGT TACTGCGCTTACTGGGCAACACGCCTTTACAAGTCGATGTGGATTTATTGCGCATTCACGACAAAGAATCCAAGCATACT TCCATCGATCACATGAATACTTTCTACCGTGACTTTGAAGCCGTGCGCCATAAAAATTACGACGGCCTTATCATCACAGG TGCGCCGCTTGGGCAAATCGATTTCGAAGATGTAGTTTATTGGGATCATATCCGTGAAATCATCGACTGGTCCCAAGAGC ATGTCACCTCAGTGTTGTTTTTATGCTGGGCAGCCCATGCGGGTTTATATCATCTCTATGGTTTAAATCGAAAAATATTG CAACAGAAGCGTTCAGGCGTATTCGTGCATCGCCGTACCTCTCAGCATTTCCCGTTACTGCGCGGTTTTGATGATGAATT TTTTGCACCCCATTCCCGTTTTGCCGAAATGGATGTCGAAGAAATTAGACAACATCCACAGCTGCAGCTATTGGCCGAGT CCGATGAGGCAGGGGCTTATTTGGTGTTAAGTCGGAATAATCGTAACTTGTTTGTGATGGGTCATCCTGAATATCAAAAG TCGACCTTAAACGAGGAATATCAGCGAGACTTAAGCCAAGGTTTAGACCCGAATGTGCCGCAGAATTATTATCGCAATGA TGATCCTAAAGACGACGCCATTGCCCGCTGGCACAGCCACGGTAGTTTGTTGGTGAGTAATTGGCTTAATTATTACGTCT ATCAGTTAACCCCTTACGACTTAAGCGATATGACGGCGATGACACCGTGGGAGTCGCGTTAA
Upstream 100 bases:
>100_bases ACGATACTGCTAGAGAAAGTCGGTGGCTAGTTAGCCCGCTCAGAAGTGAGCTGACATACGCGCCGAATCCGTTGGTATTT ACGAACAGAAGAGGCGCGGT
Downstream 100 bases:
>100_bases GGTTTTGTTTAGCCTTTTATGGTGATGTGGTCACATGGATGTGACTTTAGCTGATACCCAAAAGCACTTAATATATCTCT CCCTTAGAGCCAACCTTCCA
Product: homoserine O-succinyltransferase
Products: NA
Alternate protein names: Homoserine O-transsuccinylase; HTS [H]
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MPVRIPDHLPAAEVLESENIFVMSETRAANQDIRPMKVLILNLMPNKIETETQLLRLLGNTPLQVDVDLLRIHDKESKHT SIDHMNTFYRDFEAVRHKNYDGLIITGAPLGQIDFEDVVYWDHIREIIDWSQEHVTSVLFLCWAAHAGLYHLYGLNRKIL QQKRSGVFVHRRTSQHFPLLRGFDDEFFAPHSRFAEMDVEEIRQHPQLQLLAESDEAGAYLVLSRNNRNLFVMGHPEYQK STLNEEYQRDLSQGLDPNVPQNYYRNDDPKDDAIARWHSHGSLLVSNWLNYYVYQLTPYDLSDMTAMTPWESR
Sequences:
>Translated_313_residues MPVRIPDHLPAAEVLESENIFVMSETRAANQDIRPMKVLILNLMPNKIETETQLLRLLGNTPLQVDVDLLRIHDKESKHT SIDHMNTFYRDFEAVRHKNYDGLIITGAPLGQIDFEDVVYWDHIREIIDWSQEHVTSVLFLCWAAHAGLYHLYGLNRKIL QQKRSGVFVHRRTSQHFPLLRGFDDEFFAPHSRFAEMDVEEIRQHPQLQLLAESDEAGAYLVLSRNNRNLFVMGHPEYQK STLNEEYQRDLSQGLDPNVPQNYYRNDDPKDDAIARWHSHGSLLVSNWLNYYVYQLTPYDLSDMTAMTPWESR >Mature_312_residues PVRIPDHLPAAEVLESENIFVMSETRAANQDIRPMKVLILNLMPNKIETETQLLRLLGNTPLQVDVDLLRIHDKESKHTS IDHMNTFYRDFEAVRHKNYDGLIITGAPLGQIDFEDVVYWDHIREIIDWSQEHVTSVLFLCWAAHAGLYHLYGLNRKILQ QKRSGVFVHRRTSQHFPLLRGFDDEFFAPHSRFAEMDVEEIRQHPQLQLLAESDEAGAYLVLSRNNRNLFVMGHPEYQKS TLNEEYQRDLSQGLDPNVPQNYYRNDDPKDDAIARWHSHGSLLVSNWLNYYVYQLTPYDLSDMTAMTPWESR
Specific function: Methionine biosynthesis; HTS variant; first step. [C]
COG id: COG1897
COG function: function code E; Homoserine trans-succinylase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HTS family [H]
Homologues:
Organism=Escherichia coli, GI1790443, Length=304, Percent_Identity=54.6052631578947, Blast_Score=365, Evalue=1e-102,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005697 - ProDom: PD037892 [H]
Pfam domain/function: PF04204 HTS [H]
EC number: =2.3.1.46 [H]
Molecular weight: Translated: 36658; Mature: 36527
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVRIPDHLPAAEVLESENIFVMSETRAANQDIRPMKVLILNLMPNKIETETQLLRLLGN CCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCC TPLQVDVDLLRIHDKESKHTSIDHMNTFYRDFEAVRHKNYDGLIITGAPLGQIDFEDVVY CCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHH WDHIREIIDWSQEHVTSVLFLCWAAHAGLYHLYGLNRKILQQKRSGVFVHRRTSQHFPLL HHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHCCEEEEECCCCCCCHH RGFDDEFFAPHSRFAEMDVEEIRQHPQLQLLAESDEAGAYLVLSRNNRNLFVMGHPEYQK HCCCHHHCCCCHHHHCCCHHHHHCCCCEEEEEECCCCCEEEEEEECCCEEEEEECCCHHH STLNEEYQRDLSQGLDPNVPQNYYRNDDPKDDAIARWHSHGSLLVSNWLNYYVYQLTPYD HHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHCCCCHHHHHHHCEEEEEECCCC LSDMTAMTPWESR CCCCCCCCCCCCC >Mature Secondary Structure PVRIPDHLPAAEVLESENIFVMSETRAANQDIRPMKVLILNLMPNKIETETQLLRLLGN CCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCC TPLQVDVDLLRIHDKESKHTSIDHMNTFYRDFEAVRHKNYDGLIITGAPLGQIDFEDVVY CCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHH WDHIREIIDWSQEHVTSVLFLCWAAHAGLYHLYGLNRKILQQKRSGVFVHRRTSQHFPLL HHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHCCEEEEECCCCCCCHH RGFDDEFFAPHSRFAEMDVEEIRQHPQLQLLAESDEAGAYLVLSRNNRNLFVMGHPEYQK HCCCHHHCCCCHHHHCCCHHHHHCCCCEEEEEECCCCCEEEEEEECCCEEEEEECCCHHH STLNEEYQRDLSQGLDPNVPQNYYRNDDPKDDAIARWHSHGSLLVSNWLNYYVYQLTPYD HHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHCCCCHHHHHHHCEEEEEECCCC LSDMTAMTPWESR CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA