| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is kefB [H]
Identifier: 160874616
GI number: 160874616
Start: 1804900
End: 1806846
Strand: Direct
Name: kefB [H]
Synonym: Sbal195_1499
Alternate gene names: 160874616
Gene position: 1804900-1806846 (Clockwise)
Preceding gene: 160874614
Following gene: 160874618
Centisome position: 33.75
GC content: 48.13
Gene sequence:
>1947_bases ATGGAACATAGCTTCTTAATCCAAGTACTACTTATGCTAGTGATTGCCATTGTGGCTATTGCAGTGCTGCGCCGTTTGGG CTTACCCGCAATTCTGGCTTATTTACTCACTGGTGTCGTGAGTGGACCGAGCGGTTTTCATTGGTTTACCCAGCATCAAA TGCAATCCGTCGCTGAACTTGGGGTGGTGCTGCTGATGTTTACTTTAGGCTTAGAGTTCTCCGTGCCGCGGCTGTGGGCC ATGCGCCGTACCGTATTTGGCTTAGGCAGTGCACAGATGGTAATAACGACCCTGTTGACTATGGGCGTGGCCCTGTTGTG TGGTCTTAATTGGGTAGAAGCCTTAGTTATCGGAGCTGCCATTGCCTTATCATCCACTGCCATCGTCCTTAAATTACTCA ATGAACAGGGATGGTTGCGTCGTCGTCATGGTGAGCTATCCGTCAGTGTCTTATTATTCCAAGATTTAGCGGTTGTACCG CTGTTGATCCTATTGCCATTATTGGCCAATGGCGGCGAACCTTTAATGGTCGCGGATATCGCCTTTGCCTTGCTCAAAGG TATTTTGGCTTTTTTCCTCTTGATGGCTTTTGGTAAATGGGCATTGCCGCGGATTTTTGACGAAGTTGCCCGCTCCCGCT CTAACGAACTCTTCGTGTTATCAACACTGGTGGTGGCCTTAGTGACAGGCGCATTTACCCAATGGTTGGGGTTATCTATG GCGCTGGGGGCATTTATGGCGGGTATGCTACTAGGGGAAAGCCAGTACCGTCGCCAACTTGAGGCGGATATCCGGCCGTT TCGCGATCTATTGATGGGGCTGTTTTTCATCTCCATCGGCATGATGCTGGACTTTACCTTAGTGATGCGTTTCTGGTGGC AGATATTGTTGATCTTATTGGCCGTCGTACTAGGTAAGGCGCTGATCATTCATGGGATCTTAAGATTGGTTGGTGAACCA TTTCGGATTGCGATGAGCACCGCCATGAGCCTAGCCCAAGTGGGCGAGTTCAGTTTTGTGGTGTTGGCTTTAGCGGTTAA CTATCAACTTCTAGATAATGAAATCAGTACCATGTTAGTCATGGTCGCCGTGCTTTCCATGACGATAGCCCCGTGGCTAG TTCGCCATAGTGTGGATATTGCTAAGTGGGTGTTAGGAATAAGGCAGGCAAAACATGTGGATGAAGCTGTGCCACTCTTG ATGGATGAGCATGATCTGGTGATGATTTTTGGTTACGGCCGAGTCGGGCAGACCATTGCCCGTTTTTTGAAAACTGAAGC TGTACCTTATCTGGTCATGGATCTCGATCCGACTCGTGTCTCTGAGGCGCGTCGTGCTGGCGAACCTATTTATTTTGGTG ATGTGTGTAAACGGGCGATGTTAAAACAAATTGGCGTTAAGCAGGCCAAGATGATCGTCATCACTTTTTGTGAGTCGCGT AGTTTAGAAGAAGTTCTACCCTTATGTAAGTTATTGGCGCCAGACGCTAAAATTTTAGTCAGAACTAAAGACGACAGTGA TTTAGACTTACTGAAAAAAGCCGGTGCCAATCAAGTGATCCCAGAATCTTTGGAAGGCAGCCTGATGTTAGTGTCACAGG TGTTACATCAATGTGGTGTGCCTTTGGCGCGCATTTTAAAACGCTTGGAGTCAGAGCGGCGTAATCATTATCAATTTTTA CATGGCTTCTTTTCCGGTACTGAAACCGATTTCACCTTAGAGTCATTGCATGCGGTGGCGTTACCGCGTGGTGCAGATGC GATTGGTAAAACCGTTGCTGAGATCATGTGGGAAACATTGAGGGTGGAGTTAAGGGCGATTCGTCGCAGTGGCGCAGAAG TGGAACATCCTGAGCAGGACTGGGTTTTTCGTGCAGGGGATATCTTACTGATAGTGGGTAAACCACGAAGACTTGAGAAA GCGGAAGCTAAACTGCTGCACGGCTAA
Upstream 100 bases:
>100_bases TTTGTTAATAAAATTTGTCTTTGTTAGTCATTCAGTTAAGCTTAAAACTCAGCGTTAGTTTTTTTGACACGTCAGCATTT TGACAGGAGTCATCGCCCCA
Downstream 100 bases:
>100_bases AGGCTAAAGGTTAATGGTTAATGGTTAATGGTTAATGGTTAATGGTTAATGGTTAATGGTCAGCGTGAGTGATGGATGAA AACGCAGATATAAAAATGCC
Product: potassium efflux system protein
Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]
Alternate protein names: K(+)/H(+) antiporter; NEM-activatable K(+)/H(+) antiporter [H]
Number of amino acids: Translated: 648; Mature: 648
Protein sequence:
>648_residues MEHSFLIQVLLMLVIAIVAIAVLRRLGLPAILAYLLTGVVSGPSGFHWFTQHQMQSVAELGVVLLMFTLGLEFSVPRLWA MRRTVFGLGSAQMVITTLLTMGVALLCGLNWVEALVIGAAIALSSTAIVLKLLNEQGWLRRRHGELSVSVLLFQDLAVVP LLILLPLLANGGEPLMVADIAFALLKGILAFFLLMAFGKWALPRIFDEVARSRSNELFVLSTLVVALVTGAFTQWLGLSM ALGAFMAGMLLGESQYRRQLEADIRPFRDLLMGLFFISIGMMLDFTLVMRFWWQILLILLAVVLGKALIIHGILRLVGEP FRIAMSTAMSLAQVGEFSFVVLALAVNYQLLDNEISTMLVMVAVLSMTIAPWLVRHSVDIAKWVLGIRQAKHVDEAVPLL MDEHDLVMIFGYGRVGQTIARFLKTEAVPYLVMDLDPTRVSEARRAGEPIYFGDVCKRAMLKQIGVKQAKMIVITFCESR SLEEVLPLCKLLAPDAKILVRTKDDSDLDLLKKAGANQVIPESLEGSLMLVSQVLHQCGVPLARILKRLESERRNHYQFL HGFFSGTETDFTLESLHAVALPRGADAIGKTVAEIMWETLRVELRAIRRSGAEVEHPEQDWVFRAGDILLIVGKPRRLEK AEAKLLHG
Sequences:
>Translated_648_residues MEHSFLIQVLLMLVIAIVAIAVLRRLGLPAILAYLLTGVVSGPSGFHWFTQHQMQSVAELGVVLLMFTLGLEFSVPRLWA MRRTVFGLGSAQMVITTLLTMGVALLCGLNWVEALVIGAAIALSSTAIVLKLLNEQGWLRRRHGELSVSVLLFQDLAVVP LLILLPLLANGGEPLMVADIAFALLKGILAFFLLMAFGKWALPRIFDEVARSRSNELFVLSTLVVALVTGAFTQWLGLSM ALGAFMAGMLLGESQYRRQLEADIRPFRDLLMGLFFISIGMMLDFTLVMRFWWQILLILLAVVLGKALIIHGILRLVGEP FRIAMSTAMSLAQVGEFSFVVLALAVNYQLLDNEISTMLVMVAVLSMTIAPWLVRHSVDIAKWVLGIRQAKHVDEAVPLL MDEHDLVMIFGYGRVGQTIARFLKTEAVPYLVMDLDPTRVSEARRAGEPIYFGDVCKRAMLKQIGVKQAKMIVITFCESR SLEEVLPLCKLLAPDAKILVRTKDDSDLDLLKKAGANQVIPESLEGSLMLVSQVLHQCGVPLARILKRLESERRNHYQFL HGFFSGTETDFTLESLHAVALPRGADAIGKTVAEIMWETLRVELRAIRRSGAEVEHPEQDWVFRAGDILLIVGKPRRLEK AEAKLLHG >Mature_648_residues MEHSFLIQVLLMLVIAIVAIAVLRRLGLPAILAYLLTGVVSGPSGFHWFTQHQMQSVAELGVVLLMFTLGLEFSVPRLWA MRRTVFGLGSAQMVITTLLTMGVALLCGLNWVEALVIGAAIALSSTAIVLKLLNEQGWLRRRHGELSVSVLLFQDLAVVP LLILLPLLANGGEPLMVADIAFALLKGILAFFLLMAFGKWALPRIFDEVARSRSNELFVLSTLVVALVTGAFTQWLGLSM ALGAFMAGMLLGESQYRRQLEADIRPFRDLLMGLFFISIGMMLDFTLVMRFWWQILLILLAVVLGKALIIHGILRLVGEP FRIAMSTAMSLAQVGEFSFVVLALAVNYQLLDNEISTMLVMVAVLSMTIAPWLVRHSVDIAKWVLGIRQAKHVDEAVPLL MDEHDLVMIFGYGRVGQTIARFLKTEAVPYLVMDLDPTRVSEARRAGEPIYFGDVCKRAMLKQIGVKQAKMIVITFCESR SLEEVLPLCKLLAPDAKILVRTKDDSDLDLLKKAGANQVIPESLEGSLMLVSQVLHQCGVPLARILKRLESERRNHYQFL HGFFSGTETDFTLESLHAVALPRGADAIGKTVAEIMWETLRVELRAIRRSGAEVEHPEQDWVFRAGDILLIVGKPRRLEK AEAKLLHG
Specific function: Transport system that facilitates potassium-efflux, possibly by potassium-proton antiport [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI157388921, Length=407, Percent_Identity=26.044226044226, Blast_Score=95, Evalue=2e-19, Organism=Escherichia coli, GI1789749, Length=545, Percent_Identity=35.5963302752294, Blast_Score=289, Evalue=5e-79, Organism=Escherichia coli, GI1786232, Length=569, Percent_Identity=33.0404217926186, Blast_Score=277, Evalue=2e-75, Organism=Escherichia coli, GI1786685, Length=523, Percent_Identity=30.019120458891, Blast_Score=204, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6322367, Length=409, Percent_Identity=22.7383863080685, Blast_Score=75, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR020884 - InterPro: IPR004771 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 71886; Mature: 71886
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHSFLIQVLLMLVIAIVAIAVLRRLGLPAILAYLLTGVVSGPSGFHWFTQHQMQSVAEL CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH GVVLLMFTLGLEFSVPRLWAMRRTVFGLGSAQMVITTLLTMGVALLCGLNWVEALVIGAA HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IALSSTAIVLKLLNEQGWLRRRHGELSVSVLLFQDLAVVPLLILLPLLANGGEPLMVADI HHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH AFALLKGILAFFLLMAFGKWALPRIFDEVARSRSNELFVLSTLVVALVTGAFTQWLGLSM HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHH ALGAFMAGMLLGESQYRRQLEADIRPFRDLLMGLFFISIGMMLDFTLVMRFWWQILLILL HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVVLGKALIIHGILRLVGEPFRIAMSTAMSLAQVGEFSFVVLALAVNYQLLDNEISTMLV HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH MVAVLSMTIAPWLVRHSVDIAKWVLGIRQAKHVDEAVPLLMDEHDLVMIFGYGRVGQTIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHH RFLKTEAVPYLVMDLDPTRVSEARRAGEPIYFGDVCKRAMLKQIGVKQAKMIVITFCESR HHHHHCCCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHEEEEEECCCC SLEEVLPLCKLLAPDAKILVRTKDDSDLDLLKKAGANQVIPESLEGSLMLVSQVLHQCGV CHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHCCC PLARILKRLESERRNHYQFLHGFFSGTETDFTLESLHAVALPRGADAIGKTVAEIMWETL CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH RVELRAIRRSGAEVEHPEQDWVFRAGDILLIVGKPRRLEKAEAKLLHG HHHHHHHHHCCCCCCCCCCCCEEECCCEEEEECCCCHHHHHHHHHCCC >Mature Secondary Structure MEHSFLIQVLLMLVIAIVAIAVLRRLGLPAILAYLLTGVVSGPSGFHWFTQHQMQSVAEL CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH GVVLLMFTLGLEFSVPRLWAMRRTVFGLGSAQMVITTLLTMGVALLCGLNWVEALVIGAA HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IALSSTAIVLKLLNEQGWLRRRHGELSVSVLLFQDLAVVPLLILLPLLANGGEPLMVADI HHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH AFALLKGILAFFLLMAFGKWALPRIFDEVARSRSNELFVLSTLVVALVTGAFTQWLGLSM HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHH ALGAFMAGMLLGESQYRRQLEADIRPFRDLLMGLFFISIGMMLDFTLVMRFWWQILLILL HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVVLGKALIIHGILRLVGEPFRIAMSTAMSLAQVGEFSFVVLALAVNYQLLDNEISTMLV HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH MVAVLSMTIAPWLVRHSVDIAKWVLGIRQAKHVDEAVPLLMDEHDLVMIFGYGRVGQTIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHH RFLKTEAVPYLVMDLDPTRVSEARRAGEPIYFGDVCKRAMLKQIGVKQAKMIVITFCESR HHHHHCCCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHEEEEEECCCC SLEEVLPLCKLLAPDAKILVRTKDDSDLDLLKKAGANQVIPESLEGSLMLVSQVLHQCGV CHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHCCC PLARILKRLESERRNHYQFLHGFFSGTETDFTLESLHAVALPRGADAIGKTVAEIMWETL CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH RVELRAIRRSGAEVEHPEQDWVFRAGDILLIVGKPRRLEKAEAKLLHG HHHHHHHHHCCCCCCCCCCCCEEECCCEEEEECCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA