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The map label for this gene is yedQ [H]

Identifier: 160874615

GI number: 160874615

Start: 1803839

End: 1804729

Strand: Reverse

Name: yedQ [H]

Synonym: Sbal195_1498

Alternate gene names: 160874615

Gene position: 1804729-1803839 (Counterclockwise)

Preceding gene: 160874617

Following gene: 160874597

Centisome position: 33.75

GC content: 44.89

Gene sequence:

>891_bases
ATGGACTTTGGCCTAGCGACCGAGCTATATCCCGACGAATATCGCTATCAAACAGAACATTATAGTCCCAATGATAATCC
ATTGGACTTGGTACAAGTGATCCAACAACTGCACGCCAGTTTAGATCCAAGGACAGTCTTTGCCTGCTATGGCAAAGTGC
TGGGACAACACTTGCCGATCCAAGGTGTGCGCTTAAGTTATGGCGAACATAAATTAAGCTGGGGCAAACGTTATGGCATC
AGCGTCAAACGACAGCTCATATGTGCAGGTATGCCGCTGACGATTCAGTACCAGTTATTGACGCCACTGACGCCATCGCA
AACCTCAAACCTGAAAGAGATTGAGCCACTGTTATTGCAACCGTTATTAAATGCGATGCAATACCAAGAAATGTCGATGC
AAGCCATGTTTGACTCGCTCACAGGTTTAGGTAATCGCCATTACTACAGTCAAAGTCTCAGCAATGCGACCGCCAGAGCC
CATAGAAAACAAGGTTCTGTCGCACTCATAGTGCTCGATTTAGATAACTTTAAACAGCTAAATGATAAATTCGGCCATAA
ATGCGGTGATTATATTCTGAAGGAATTTGGCGACATCATACGTGCGACCATACGTAATACGGATCAAGCATTCCGTATCG
GCGGTGACGAATTCGTTATTATTGTCCAAGGTAATATTCATGCGGCAGGCTTGTTATGCGAACGGATAGTCTCGGCCATC
AATCAGCACAGTAGTTTCACCCAGTTTGGGGTGAGCTGTAGTTTAGGTGCGGCAGAATCACACGATACCATTGAAGCCGA
ACAACTTTATGAACTTGCCGATAAGACGCTATATCAAGCTAAAGCAGCGGGACGTAACTGCTATAAACTCAGCCAAAATC
AATTAGTTTAG

Upstream 100 bases:

>100_bases
TGACTAACAAAGACAAATTTTATTAACAAATATTACGGCACGGTATTTGCTTAGACTAGGTAAGAGATGTATCGCACTAA
CATTTGCTGGAGTGATGATT

Downstream 100 bases:

>100_bases
ACGCGCAGGGATGCCAATGAAATGCGATAACAAACTCGCAGCGCGTAATCTGTGAAGGTTCAAAACTAAAGGAAAGTTAC
TATCTCAATGTAGATCTCAA

Product: diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MDFGLATELYPDEYRYQTEHYSPNDNPLDLVQVIQQLHASLDPRTVFACYGKVLGQHLPIQGVRLSYGEHKLSWGKRYGI
SVKRQLICAGMPLTIQYQLLTPLTPSQTSNLKEIEPLLLQPLLNAMQYQEMSMQAMFDSLTGLGNRHYYSQSLSNATARA
HRKQGSVALIVLDLDNFKQLNDKFGHKCGDYILKEFGDIIRATIRNTDQAFRIGGDEFVIIVQGNIHAAGLLCERIVSAI
NQHSSFTQFGVSCSLGAAESHDTIEAEQLYELADKTLYQAKAAGRNCYKLSQNQLV

Sequences:

>Translated_296_residues
MDFGLATELYPDEYRYQTEHYSPNDNPLDLVQVIQQLHASLDPRTVFACYGKVLGQHLPIQGVRLSYGEHKLSWGKRYGI
SVKRQLICAGMPLTIQYQLLTPLTPSQTSNLKEIEPLLLQPLLNAMQYQEMSMQAMFDSLTGLGNRHYYSQSLSNATARA
HRKQGSVALIVLDLDNFKQLNDKFGHKCGDYILKEFGDIIRATIRNTDQAFRIGGDEFVIIVQGNIHAAGLLCERIVSAI
NQHSSFTQFGVSCSLGAAESHDTIEAEQLYELADKTLYQAKAAGRNCYKLSQNQLV
>Mature_296_residues
MDFGLATELYPDEYRYQTEHYSPNDNPLDLVQVIQQLHASLDPRTVFACYGKVLGQHLPIQGVRLSYGEHKLSWGKRYGI
SVKRQLICAGMPLTIQYQLLTPLTPSQTSNLKEIEPLLLQPLLNAMQYQEMSMQAMFDSLTGLGNRHYYSQSLSNATARA
HRKQGSVALIVLDLDNFKQLNDKFGHKCGDYILKEFGDIIRATIRNTDQAFRIGGDEFVIIVQGNIHAAGLLCERIVSAI
NQHSSFTQFGVSCSLGAAESHDTIEAEQLYELADKTLYQAKAAGRNCYKLSQNQLV

Specific function: Involves in the regulation of cellulose production [H]

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI87082007, Length=170, Percent_Identity=36.4705882352941, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI145693134, Length=183, Percent_Identity=31.6939890710383, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1787262, Length=157, Percent_Identity=34.3949044585987, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI87081974, Length=198, Percent_Identity=31.3131313131313, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1788381, Length=193, Percent_Identity=30.0518134715026, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1786584, Length=234, Percent_Identity=26.4957264957265, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1788956, Length=182, Percent_Identity=31.3186813186813, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI87081977, Length=153, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI87081881, Length=161, Percent_Identity=29.8136645962733, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787816, Length=171, Percent_Identity=26.3157894736842, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787056, Length=158, Percent_Identity=32.9113924050633, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787541, Length=164, Percent_Identity=29.2682926829268, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1788085, Length=169, Percent_Identity=30.1775147928994, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787802, Length=167, Percent_Identity=27.5449101796407, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160 [H]

Pfam domain/function: PF00990 GGDEF [H]

EC number: NA

Molecular weight: Translated: 33221; Mature: 33221

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFGLATELYPDEYRYQTEHYSPNDNPLDLVQVIQQLHASLDPRTVFACYGKVLGQHLPI
CCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
QGVRLSYGEHKLSWGKRYGISVKRQLICAGMPLTIQYQLLTPLTPSQTSNLKEIEPLLLQ
CCEEECCCCHHHCCCHHCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHH
PLLNAMQYQEMSMQAMFDSLTGLGNRHYYSQSLSNATARAHRKQGSVALIVLDLDNFKQL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHH
NDKFGHKCGDYILKEFGDIIRATIRNTDQAFRIGGDEFVIIVQGNIHAAGLLCERIVSAI
HHHHCHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCEEEEEEECCCHHHHHHHHHHHHHH
NQHSSFTQFGVSCSLGAAESHDTIEAEQLYELADKTLYQAKAAGRNCYKLSQNQLV
HCCCCHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC
>Mature Secondary Structure
MDFGLATELYPDEYRYQTEHYSPNDNPLDLVQVIQQLHASLDPRTVFACYGKVLGQHLPI
CCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
QGVRLSYGEHKLSWGKRYGISVKRQLICAGMPLTIQYQLLTPLTPSQTSNLKEIEPLLLQ
CCEEECCCCHHHCCCHHCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHH
PLLNAMQYQEMSMQAMFDSLTGLGNRHYYSQSLSNATARAHRKQGSVALIVLDLDNFKQL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHH
NDKFGHKCGDYILKEFGDIIRATIRNTDQAFRIGGDEFVIIVQGNIHAAGLLCERIVSAI
HHHHCHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCEEEEEEECCCHHHHHHHHHHHHHH
NQHSSFTQFGVSCSLGAAESHDTIEAEQLYELADKTLYQAKAAGRNCYKLSQNQLV
HCCCCHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA