| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is nag096 [H]
Identifier: 160874550
GI number: 160874550
Start: 1716588
End: 1719335
Strand: Reverse
Name: nag096 [H]
Synonym: Sbal195_1432
Alternate gene names: 160874550
Gene position: 1719335-1716588 (Counterclockwise)
Preceding gene: 160874551
Following gene: 160874545
Centisome position: 32.15
GC content: 48.84
Gene sequence:
>2748_bases GTGAAAGGACTAATTAAAGGAAAAGGGAAGATAAAGTGGCAGGGGATTAAGACGGCCTTAATCAGCGGCGTCATGGCCGT GCTTCCCGCGATGCCAGTGCTTTCAATACTTGCGATGCCATCGTTACAGGCAGCCAACGCCGTGCAGGAGGCAAATCATG TCGCACTTAATCAATTGGCCGATAAACTCCAATTAAATTATCAGTTAACCGCCAGTTATCTTGAAACCTGTCCCGCTAAA GAAACCCAGTGCTATCACTCCGCCATTGAGCTGACCTTGCCCACTCAGTTATCTAACGACAAGTTATCCAGCGAAGAGTT AAATCACGGCGACTGGCAAATTTATTTCAGCCAGCTATCGCCCGTTTATTTTGTCGATGCGGGTGACTTTAACATTGAGC ATATCAATGGCGATTTACATAAAATCACGCCTAAAGCCAGTTTTAAGGGTTTCGTCGCCAATCAAGTTTATCGTATTGAG TTTTATAGCAAAGGCAGCCAAATCACCCGTTCCGAGTTTATGCCAAACTTCTTTGTCGCTATGGGCGATAAGGCGCAGGT CATAAAGAGCACTCAAACAAGGCGCGATCCAGAAACGGGTTTAGCCGAGCAAGACTACCTCGCGCCTTTTAATGCCGAGA AACAATTCTTACTGGCAAAAAACGATGCAACCCCCTTTGCCGATGGTCAGTATTTAGCCGAGCAATATCAAGCCTTAGCC GCAAACGCAAACAAGGCAACTGACATTAGCGACAAACTCATCCCCACGCCACTTCACAGCCAAAGCCTAGACTCAGCGCC CTTATCTCTTGCCAAAGGTTATCGACTCACGGCTGATGCGGTAGACTTTAAAGGACGGCAGGCGGCGTTTGATTACCTCG CCAGTTTAGGGTTTGCAGCCAAGGACAAAGGCACGCCGCTGTTATTGCAACTCGATACTCAAGCCCCTAAAGTCGCCAGC ACTGAAGCCCATGATAGTGAAATGAAAACCAGCGAAGCCTATCAGTTAACCATAACGGCTGAGCAAATCAGTATTCGAGC GGGCACTGAAGCGGGACTCTTCTATGGCCTACAAAGCCTAGCAGGGTTGATCAGTTTAAGTGACGATCAACTGGTCGCCA TCGAGATCCAAGACCAGCCTCGCTACGCCTTTCGCGGCCTGCACATCGATTTAGCCCGTAACTTCCACTCGCTAGATTTT ATTAAACGCATCATTCCACAGCTCGCCGCCTATAAAATCAATAAGCTGCATTTGCACTTAGCCGACGACGAAGGCTGGCG TTTAGCCATACCCGGCTTACCCGAACTGACCGATGTGGGCGCAAAACGCTGTTTCGATTTAACCGAGCAAACCTGTTTAT TGCCACAACTAGGCAGCGGAATTGCGGACGTTAAGCCCGTCGATGGCTACTTAACCGTGGCACAATACCAAGAAATATTA CAACTGGCTGATGCTCACCATATCGAAATGATCCCCTCACTGGACATGCCAGGGCATTCCCGCGCCGCGATAAAATCCAT GGAGGCGCGTTATCACCATTACCTAGCAAAAGGAGATAAAGCTAAGGCGGAGGAGTTTTTACTGACTGAATTTGCAGATA AAACCCAATATTCGTCGATTCAGTATTATCACGACAATACACTCAATGTGTGCTTGGCGAGCACCTACCACTTTATCGAT ACTGTGATTGATGAAGTCAAAAAAATGCACCAAGCCGTAGGCGTTCCCTTAGTGCATTACCACATAGGTGCCGATGAAAC CGCGGGCGCTTGGGTCGACTCTCCCGCGTGTATCGCAATGAAGCAACAAAAAGCCGATGAGTTAACCGGACTGCATTCGC TCAATGGTTACTTTATCGAACGCGTTGCTAACATGCTGGCAGATAAAGGGATTATTGCCGCAGGTTGGAATGATGGCATG GGTGAAGTGCGCCCCGAAAACATGCCCGCCCAAGTGCAATCTAACGCTTGGTCACTGATTTCGGATAACGGTCATCAAAT CGCCCATAAGCAAGCCAATTTAGGCTGGAAGGTGGTGATTTCAACGCCGGAAGTCACCTATTTTGATTTCCCCTATGCTA GCCATCCAGATGAGCGCGGCAATCATTGGGCCTCGAGGGGGATTGACAGTTTTAAGGTGTTTAGCTTTATGCCAGACAAC CTGCCCGCCCACGCCGAGCGCTGGCGCAACACGCTTAATCAACCCTTTACCTCAGATGATACTCAAAGCCAATTGCATGC TGGCCGCGTTTTTTATGGCTTACAGGGGCATCTTTGGAGCGAAATGGTGCAATCGGACGAGCAAGCAGAATACATGTTAT TCCCGCGCATGGTCGCCCTTGCAGAACGGGCATGGCATAGGGCGCCATGGGAATTAGCCTATGATTATCAAGGTAAAATC TATAGTCAGCAAACTCAACATTTTGCCAGCCAACTCAATGGCCAAGCCGAGCAAGTCCTCAAACAGGATTGGCAAACCTT CGCCGCGGTTTACGCCAATAAAGTGCAACCTAAATTAGCAAAAGCGGGGATTTTCTACCGCATAGCACCGCCTGGAATAC GTGTTGAACATCAGCAGTTAGTGCTCAATAGCTTATATCCCAATGCCGAGCTGGAATATCAACTCGACTCAGGACCTTGG CTAAGCTACCGCCAAGCGTTCAAGCTTAATGATGTCAAACACATCCGCGCCAGAGTCAAAGATGGTACGCGTTACTCTCG CCCATCGACTTGGCAAAGCTCCCTCTAA
Upstream 100 bases:
>100_bases GCCCCCAACTGGCGGACTTGACGATTTCAGCCAGCCAACATCACAATGCGGCACTCATTGGCGCGGCACAATGGTTTTTA CAACAAAAGGACTCAGTTAA
Downstream 100 bases:
>100_bases TCGTTCATCGCACAATATCGGCCATCACATATGATGGCCGACGCGTTAACGCACAACTGATGCCGCTGATATTTGTTTTT TTGAAACGCTCACGTTATCA
Product: beta-N-acetylhexosaminidase
Products: NA
Alternate protein names: Beta-GlcNAcase; Beta-N-acetylhexosaminidase; Beta-NAHase; N-acetyl-beta-glucosaminidase [H]
Number of amino acids: Translated: 915; Mature: 915
Protein sequence:
>915_residues MKGLIKGKGKIKWQGIKTALISGVMAVLPAMPVLSILAMPSLQAANAVQEANHVALNQLADKLQLNYQLTASYLETCPAK ETQCYHSAIELTLPTQLSNDKLSSEELNHGDWQIYFSQLSPVYFVDAGDFNIEHINGDLHKITPKASFKGFVANQVYRIE FYSKGSQITRSEFMPNFFVAMGDKAQVIKSTQTRRDPETGLAEQDYLAPFNAEKQFLLAKNDATPFADGQYLAEQYQALA ANANKATDISDKLIPTPLHSQSLDSAPLSLAKGYRLTADAVDFKGRQAAFDYLASLGFAAKDKGTPLLLQLDTQAPKVAS TEAHDSEMKTSEAYQLTITAEQISIRAGTEAGLFYGLQSLAGLISLSDDQLVAIEIQDQPRYAFRGLHIDLARNFHSLDF IKRIIPQLAAYKINKLHLHLADDEGWRLAIPGLPELTDVGAKRCFDLTEQTCLLPQLGSGIADVKPVDGYLTVAQYQEIL QLADAHHIEMIPSLDMPGHSRAAIKSMEARYHHYLAKGDKAKAEEFLLTEFADKTQYSSIQYYHDNTLNVCLASTYHFID TVIDEVKKMHQAVGVPLVHYHIGADETAGAWVDSPACIAMKQQKADELTGLHSLNGYFIERVANMLADKGIIAAGWNDGM GEVRPENMPAQVQSNAWSLISDNGHQIAHKQANLGWKVVISTPEVTYFDFPYASHPDERGNHWASRGIDSFKVFSFMPDN LPAHAERWRNTLNQPFTSDDTQSQLHAGRVFYGLQGHLWSEMVQSDEQAEYMLFPRMVALAERAWHRAPWELAYDYQGKI YSQQTQHFASQLNGQAEQVLKQDWQTFAAVYANKVQPKLAKAGIFYRIAPPGIRVEHQQLVLNSLYPNAELEYQLDSGPW LSYRQAFKLNDVKHIRARVKDGTRYSRPSTWQSSL
Sequences:
>Translated_915_residues MKGLIKGKGKIKWQGIKTALISGVMAVLPAMPVLSILAMPSLQAANAVQEANHVALNQLADKLQLNYQLTASYLETCPAK ETQCYHSAIELTLPTQLSNDKLSSEELNHGDWQIYFSQLSPVYFVDAGDFNIEHINGDLHKITPKASFKGFVANQVYRIE FYSKGSQITRSEFMPNFFVAMGDKAQVIKSTQTRRDPETGLAEQDYLAPFNAEKQFLLAKNDATPFADGQYLAEQYQALA ANANKATDISDKLIPTPLHSQSLDSAPLSLAKGYRLTADAVDFKGRQAAFDYLASLGFAAKDKGTPLLLQLDTQAPKVAS TEAHDSEMKTSEAYQLTITAEQISIRAGTEAGLFYGLQSLAGLISLSDDQLVAIEIQDQPRYAFRGLHIDLARNFHSLDF IKRIIPQLAAYKINKLHLHLADDEGWRLAIPGLPELTDVGAKRCFDLTEQTCLLPQLGSGIADVKPVDGYLTVAQYQEIL QLADAHHIEMIPSLDMPGHSRAAIKSMEARYHHYLAKGDKAKAEEFLLTEFADKTQYSSIQYYHDNTLNVCLASTYHFID TVIDEVKKMHQAVGVPLVHYHIGADETAGAWVDSPACIAMKQQKADELTGLHSLNGYFIERVANMLADKGIIAAGWNDGM GEVRPENMPAQVQSNAWSLISDNGHQIAHKQANLGWKVVISTPEVTYFDFPYASHPDERGNHWASRGIDSFKVFSFMPDN LPAHAERWRNTLNQPFTSDDTQSQLHAGRVFYGLQGHLWSEMVQSDEQAEYMLFPRMVALAERAWHRAPWELAYDYQGKI YSQQTQHFASQLNGQAEQVLKQDWQTFAAVYANKVQPKLAKAGIFYRIAPPGIRVEHQQLVLNSLYPNAELEYQLDSGPW LSYRQAFKLNDVKHIRARVKDGTRYSRPSTWQSSL >Mature_915_residues MKGLIKGKGKIKWQGIKTALISGVMAVLPAMPVLSILAMPSLQAANAVQEANHVALNQLADKLQLNYQLTASYLETCPAK ETQCYHSAIELTLPTQLSNDKLSSEELNHGDWQIYFSQLSPVYFVDAGDFNIEHINGDLHKITPKASFKGFVANQVYRIE FYSKGSQITRSEFMPNFFVAMGDKAQVIKSTQTRRDPETGLAEQDYLAPFNAEKQFLLAKNDATPFADGQYLAEQYQALA ANANKATDISDKLIPTPLHSQSLDSAPLSLAKGYRLTADAVDFKGRQAAFDYLASLGFAAKDKGTPLLLQLDTQAPKVAS TEAHDSEMKTSEAYQLTITAEQISIRAGTEAGLFYGLQSLAGLISLSDDQLVAIEIQDQPRYAFRGLHIDLARNFHSLDF IKRIIPQLAAYKINKLHLHLADDEGWRLAIPGLPELTDVGAKRCFDLTEQTCLLPQLGSGIADVKPVDGYLTVAQYQEIL QLADAHHIEMIPSLDMPGHSRAAIKSMEARYHHYLAKGDKAKAEEFLLTEFADKTQYSSIQYYHDNTLNVCLASTYHFID TVIDEVKKMHQAVGVPLVHYHIGADETAGAWVDSPACIAMKQQKADELTGLHSLNGYFIERVANMLADKGIIAAGWNDGM GEVRPENMPAQVQSNAWSLISDNGHQIAHKQANLGWKVVISTPEVTYFDFPYASHPDERGNHWASRGIDSFKVFSFMPDN LPAHAERWRNTLNQPFTSDDTQSQLHAGRVFYGLQGHLWSEMVQSDEQAEYMLFPRMVALAERAWHRAPWELAYDYQGKI YSQQTQHFASQLNGQAEQVLKQDWQTFAAVYANKVQPKLAKAGIFYRIAPPGIRVEHQQLVLNSLYPNAELEYQLDSGPW LSYRQAFKLNDVKHIRARVKDGTRYSRPSTWQSSL
Specific function: Unknown
COG id: COG3525
COG function: function code G; N-acetyl-beta-hexosaminidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 20 family [H]
Homologues:
Organism=Homo sapiens, GI4504373, Length=467, Percent_Identity=21.627408993576, Blast_Score=80, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17569815, Length=308, Percent_Identity=25.6493506493506, Blast_Score=80, Evalue=5e-15, Organism=Drosophila melanogaster, GI17933586, Length=135, Percent_Identity=35.5555555555556, Blast_Score=72, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015882 - InterPro: IPR008965 - InterPro: IPR004866 - InterPro: IPR012291 - InterPro: IPR001540 - InterPro: IPR015883 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF03173 CHB_HEX; PF00728 Glyco_hydro_20; PF02838 Glyco_hydro_20b [H]
EC number: =3.2.1.52 [H]
Molecular weight: Translated: 102293; Mature: 102293
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGLIKGKGKIKWQGIKTALISGVMAVLPAMPVLSILAMPSLQAANAVQEANHVALNQLA CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH DKLQLNYQLTASYLETCPAKETQCYHSAIELTLPTQLSNDKLSSEELNHGDWQIYFSQLS HHHHCCCEEHHHHHHHCCCCHHHHHHHEEEEEECCCCCCCCCCHHHCCCCCEEEEEECCC PVYFVDAGDFNIEHINGDLHKITPKASFKGFVANQVYRIEFYSKGSQITRSEFMPNFFVA CEEEEECCCCEEEEECCCCEECCCCCCCCCHHHCEEEEEEEECCCCCHHHHHCCCCEEEE MGDKAQVIKSTQTRRDPETGLAEQDYLAPFNAEKQFLLAKNDATPFADGQYLAEQYQALA ECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH ANANKATDISDKLIPTPLHSQSLDSAPLSLAKGYRLTADAVDFKGRQAAFDYLASLGFAA CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEHHHCCCCHHHHHHHHHHCCCCC KDKGTPLLLQLDTQAPKVASTEAHDSEMKTSEAYQLTITAEQISIRAGTEAGLFYGLQSL CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEHEEEEECCCCHHHHHHHHHH AGLISLSDDQLVAIEIQDQPRYAFRGLHIDLARNFHSLDFIKRIIPQLAAYKINKLHLHL HHHEECCCCCEEEEEECCCCCHHHCCEEEEHHCCCHHHHHHHHHHHHHHHEEEEEEEEEE ADDEGWRLAIPGLPELTDVGAKRCFDLTEQTCLLPQLGSGIADVKPVDGYLTVAQYQEIL ECCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCEEEHHHHHHHH QLADAHHIEMIPSLDMPGHSRAAIKSMEARYHHYLAKGDKAKAEEFLLTEFADKTQYSSI HHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCE QYYHDNTLNVCLASTYHFIDTVIDEVKKMHQAVGVPLVHYHIGADETAGAWVDSPACIAM EEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHH KQQKADELTGLHSLNGYFIERVANMLADKGIIAAGWNDGMGEVRPENMPAQVQSNAWSLI HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHCCCEEEE SDNGHQIAHKQANLGWKVVISTPEVTYFDFPYASHPDERGNHWASRGIDSFKVFSFMPDN CCCCCEEEHHHCCCCEEEEEECCCEEEEECCCCCCCCCCCCHHHHCCCCCEEEEEECCCC LPAHAERWRNTLNQPFTSDDTQSQLHAGRVFYGLQGHLWSEMVQSDEQAEYMLFPRMVAL CCHHHHHHHHHHCCCCCCCCHHHHHHHCEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHH AERAWHRAPWELAYDYQGKIYSQQTQHFASQLNGQAEQVLKQDWQTFAAVYANKVQPKLA HHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHH KAGIFYRIAPPGIRVEHQQLVLNSLYPNAELEYQLDSGPWLSYRQAFKLNDVKHIRARVK HCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHC DGTRYSRPSTWQSSL CCCCCCCCCCCCCCC >Mature Secondary Structure MKGLIKGKGKIKWQGIKTALISGVMAVLPAMPVLSILAMPSLQAANAVQEANHVALNQLA CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH DKLQLNYQLTASYLETCPAKETQCYHSAIELTLPTQLSNDKLSSEELNHGDWQIYFSQLS HHHHCCCEEHHHHHHHCCCCHHHHHHHEEEEEECCCCCCCCCCHHHCCCCCEEEEEECCC PVYFVDAGDFNIEHINGDLHKITPKASFKGFVANQVYRIEFYSKGSQITRSEFMPNFFVA CEEEEECCCCEEEEECCCCEECCCCCCCCCHHHCEEEEEEEECCCCCHHHHHCCCCEEEE MGDKAQVIKSTQTRRDPETGLAEQDYLAPFNAEKQFLLAKNDATPFADGQYLAEQYQALA ECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH ANANKATDISDKLIPTPLHSQSLDSAPLSLAKGYRLTADAVDFKGRQAAFDYLASLGFAA CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEHHHCCCCHHHHHHHHHHCCCCC KDKGTPLLLQLDTQAPKVASTEAHDSEMKTSEAYQLTITAEQISIRAGTEAGLFYGLQSL CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEHEEEEECCCCHHHHHHHHHH AGLISLSDDQLVAIEIQDQPRYAFRGLHIDLARNFHSLDFIKRIIPQLAAYKINKLHLHL HHHEECCCCCEEEEEECCCCCHHHCCEEEEHHCCCHHHHHHHHHHHHHHHEEEEEEEEEE ADDEGWRLAIPGLPELTDVGAKRCFDLTEQTCLLPQLGSGIADVKPVDGYLTVAQYQEIL ECCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCEEEHHHHHHHH QLADAHHIEMIPSLDMPGHSRAAIKSMEARYHHYLAKGDKAKAEEFLLTEFADKTQYSSI HHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCE QYYHDNTLNVCLASTYHFIDTVIDEVKKMHQAVGVPLVHYHIGADETAGAWVDSPACIAM EEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHH KQQKADELTGLHSLNGYFIERVANMLADKGIIAAGWNDGMGEVRPENMPAQVQSNAWSLI HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHCCCEEEE SDNGHQIAHKQANLGWKVVISTPEVTYFDFPYASHPDERGNHWASRGIDSFKVFSFMPDN CCCCCEEEHHHCCCCEEEEEECCCEEEEECCCCCCCCCCCCHHHHCCCCCEEEEEECCCC LPAHAERWRNTLNQPFTSDDTQSQLHAGRVFYGLQGHLWSEMVQSDEQAEYMLFPRMVAL CCHHHHHHHHHHCCCCCCCCHHHHHHHCEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHH AERAWHRAPWELAYDYQGKIYSQQTQHFASQLNGQAEQVLKQDWQTFAAVYANKVQPKLA HHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHH KAGIFYRIAPPGIRVEHQQLVLNSLYPNAELEYQLDSGPWLSYRQAFKLNDVKHIRARVK HCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHC DGTRYSRPSTWQSSL CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7574618 [H]