| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874546
Identifier: 160874546
GI number: 160874546
Start: 1713405
End: 1713686
Strand: Direct
Name: 160874546
Synonym: Sbal195_1428
Alternate gene names: NA
Gene position: 1713405-1713686 (Clockwise)
Preceding gene: 160874544
Following gene: 160874547
Centisome position: 32.04
GC content: 44.68
Gene sequence:
>282_bases ATGGTCAGACCAAAAATCCCCAGAACTATTTGTGGCCAAAGAGCCAATATCTGTTTTAAGCCTAATGGCATTCCTATGAC ACAGTTAGAGCAGGTGCCGCTGGCCGAGGACGAAATCGAGGCTATGCGCTTAGTTGATTTACTCGGTATGCAGCAACAGG AAGCGGCTAAATCAATGGGTGTATCACGTCAAACCTTGGCGAATTTAGTTAAAGGGGCAAGGTATAAGGTGGTTGATAGC TTAATCAACGGTAAAGCGCTGATGACAAACAATATCAACTGA
Upstream 100 bases:
>100_bases TGGCTTAGGCCGCTTTTAGCATTTTCCTCGTCTACTGATATAGGTTGCATATGAGAACTAAATCGAATATAAATGGCATA TGCTATAAACGAGGTGTAAC
Downstream 100 bases:
>100_bases GTATTGAACACTGGTAACGCGTATCGACGTGTCTAGGTAAGTGTAATGCAAGCAGTATTGAAAGACTCGGGCCTCAAAGT CACCACTCAAAGATGCAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MVRPKIPRTICGQRANICFKPNGIPMTQLEQVPLAEDEIEAMRLVDLLGMQQQEAAKSMGVSRQTLANLVKGARYKVVDS LINGKALMTNNIN
Sequences:
>Translated_93_residues MVRPKIPRTICGQRANICFKPNGIPMTQLEQVPLAEDEIEAMRLVDLLGMQQQEAAKSMGVSRQTLANLVKGARYKVVDS LINGKALMTNNIN >Mature_93_residues MVRPKIPRTICGQRANICFKPNGIPMTQLEQVPLAEDEIEAMRLVDLLGMQQQEAAKSMGVSRQTLANLVKGARYKVVDS LINGKALMTNNIN
Specific function: Unknown
COG id: COG1342
COG function: function code R; Predicted DNA-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0251 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013324 - InterPro: IPR002852 [H]
Pfam domain/function: PF02001 DUF134 [H]
EC number: NA
Molecular weight: Translated: 10281; Mature: 10281
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRPKIPRTICGQRANICFKPNGIPMTQLEQVPLAEDEIEAMRLVDLLGMQQQEAAKSMG CCCCCCCHHHCCCCCCEEECCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCC VSRQTLANLVKGARYKVVDSLINGKALMTNNIN CCHHHHHHHHCCCHHHHHHHHHCCCEEECCCCC >Mature Secondary Structure MVRPKIPRTICGQRANICFKPNGIPMTQLEQVPLAEDEIEAMRLVDLLGMQQQEAAKSMG CCCCCCCHHHCCCCCCEEECCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCC VSRQTLANLVKGARYKVVDSLINGKALMTNNIN CCHHHHHHHHCCCHHHHHHHHHCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA