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The map label for this gene is pecS [H]

Identifier: 160874541

GI number: 160874541

Start: 1708033

End: 1708608

Strand: Direct

Name: pecS [H]

Synonym: Sbal195_1423

Alternate gene names: 160874541

Gene position: 1708033-1708608 (Clockwise)

Preceding gene: 160874539

Following gene: 160874542

Centisome position: 31.94

GC content: 50.69

Gene sequence:

>576_bases
ATGACAGCGAAAACGACACTCACGCACGCAAGCCCTGCGGATAAAGACCAAGCGGCTTCGAACACCAAAGCAGATGGCCT
TGAAAGCGAAGATGGTTTGGATAGCATTGTCGGCCAGTGGCAGCAACAAGGGGTGACTGATGATTTGATCCCTATGGCTG
TGCTTGGGCGAATCGCGCGTTTAACGAAATATATTGAAGTGGTACTGCTGCAATGCCACGCCGAATTTGGCTTAGGTCAG
GGCGAGTTCGATGTGCTTGCCACCTTAAGGCGTTCGGGTGAGCCGTTTACACTCTCACCTTCACAGCTTTATCAGAGCAT
GATGCTAAGCTCTGGCGCTATGACGAGCCGTTTAGACAGACTCGAAAATAAGGGGCTGATTGAGCGGGCGCACAGTAAGG
AAGATCGCCGCGCCGTCCATGTCTCGTTAACTGCTGAGGGTAAGGCGCTCATTGATAAGGCCTTGCCGCAGCATATTCAA
TGTCAGAGTGCATTGTTAGCGGGCGTGAGCGTTGAAGATAGACCTATGTTGCTGCAGATTTTAAAATCTTGGCTGAATCA
ATTTGAGCCGCAATAA

Upstream 100 bases:

>100_bases
CTCTTTCAGATGTATCTTGATATAAAGATATTTTAATTCTGCGAGAAAATGACTAAGATGTAAAGAATGATATAAAGAAT
CTTTATGTTGAGATAAAGCT

Downstream 100 bases:

>100_bases
ATCGTTTAAACTTCACGTGATCATTTAGTTTTTGTTTTTAGTTTCTAGTGTTAGACATCTGGCGAGAAGCGATAGCCGAG
CGCTATTGGCTAATATGGAT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MTAKTTLTHASPADKDQAASNTKADGLESEDGLDSIVGQWQQQGVTDDLIPMAVLGRIARLTKYIEVVLLQCHAEFGLGQ
GEFDVLATLRRSGEPFTLSPSQLYQSMMLSSGAMTSRLDRLENKGLIERAHSKEDRRAVHVSLTAEGKALIDKALPQHIQ
CQSALLAGVSVEDRPMLLQILKSWLNQFEPQ

Sequences:

>Translated_191_residues
MTAKTTLTHASPADKDQAASNTKADGLESEDGLDSIVGQWQQQGVTDDLIPMAVLGRIARLTKYIEVVLLQCHAEFGLGQ
GEFDVLATLRRSGEPFTLSPSQLYQSMMLSSGAMTSRLDRLENKGLIERAHSKEDRRAVHVSLTAEGKALIDKALPQHIQ
CQSALLAGVSVEDRPMLLQILKSWLNQFEPQ
>Mature_190_residues
TAKTTLTHASPADKDQAASNTKADGLESEDGLDSIVGQWQQQGVTDDLIPMAVLGRIARLTKYIEVVLLQCHAEFGLGQG
EFDVLATLRRSGEPFTLSPSQLYQSMMLSSGAMTSRLDRLENKGLIERAHSKEDRRAVHVSLTAEGKALIDKALPQHIQC
QSALLAGVSVEDRPMLLQILKSWLNQFEPQ

Specific function: Negative regulator of pectinase, cellulase, blue pigment production and virulence genes. Also binds to promoter sites in the pecS-pecM intergenic region and negatively autoregulate its expression as well as that of pecM [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 20940; Mature: 20809

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAKTTLTHASPADKDQAASNTKADGLESEDGLDSIVGQWQQQGVTDDLIPMAVLGRIAR
CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LTKYIEVVLLQCHAEFGLGQGEFDVLATLRRSGEPFTLSPSQLYQSMMLSSGAMTSRLDR
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEECHHHHHHHHHHHCCHHHHHHHH
LENKGLIERAHSKEDRRAVHVSLTAEGKALIDKALPQHIQCQSALLAGVSVEDRPMLLQI
HHCCCHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LKSWLNQFEPQ
HHHHHHHCCCC
>Mature Secondary Structure 
TAKTTLTHASPADKDQAASNTKADGLESEDGLDSIVGQWQQQGVTDDLIPMAVLGRIAR
CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LTKYIEVVLLQCHAEFGLGQGEFDVLATLRRSGEPFTLSPSQLYQSMMLSSGAMTSRLDR
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEECHHHHHHHHHHHCCHHHHHHHH
LENKGLIERAHSKEDRRAVHVSLTAEGKALIDKALPQHIQCQSALLAGVSVEDRPMLLQI
HHCCCHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LKSWLNQFEPQ
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8022282; 9194707 [H]