| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is phnA [C]
Identifier: 160874539
GI number: 160874539
Start: 1705935
End: 1706498
Strand: Direct
Name: phnA [C]
Synonym: Sbal195_1421
Alternate gene names: 160874539
Gene position: 1705935-1706498 (Clockwise)
Preceding gene: 160874538
Following gene: 160874541
Centisome position: 31.9
GC content: 48.76
Gene sequence:
>564_bases ATGACTGAAAATGAATTGCTAAGTCGCTGTGGCGGCAAGTGTGAACTGTGTGGCAGCGAGATCGAACTCTCTATTTATGA TCTGCCAGCCTCCGATGGCCGTGACAATGAGATCATGATTTGTGAAACCTGCAGTGGCCAAATTGCGGCACCGGATACCA TGGACATGAACCACTGGCGTTGTCTAAACGACAGCATGTGGAGCCCTGTACCGGCAGTTCAAGTGATGTCATATCGTATG CTTAAGCGCTTAAATGGCGAAAGCTGGGCGCAAGATTTACTGGATATGCTTTACCTTGAAGACGATGTAAAAGCGTGGGG CGATGCTGAAGTTGCCGCCGCAGGTGACGACACTACCCCAACGTTAGACAGTAATGGTGCCGTGATTAACGCTGGTGATA CGGTCGTGATCATCAAAGATTTAAACGTGAAAGGCACTAGCTTTGTGGCTAAGCGCGGCACAGCTGTGCGTAACATTGCT TTGACTAACAACCCAGAGCACATTGAAGGCCGTGTTAACGGTACTCGCATTGTGATCCTGACGTGCTTCGTTAAAAAGTC TTAA
Upstream 100 bases:
>100_bases TAAAGCTTATAAAAAATAGGGTTATATTGCCTCAGCCCCCTGCCGAAAAAAGCCCGTTTATGGCATAATCCGCGTTTTAC TAGGCATATAGAACAGAAAA
Downstream 100 bases:
>100_bases GTTGAACCTAGTGTGGGCTCGATTTATCGAGCCGCACACCATAAAAAACCGCCATGCTCGTTAATCGACATGGCGGTTTT TTTATTTTGAATTAGAGAGT
Product: PhnA protein
Products: NA
Alternate protein names: PhnA Protein-Like Protein; Zn-Ribbon-Containing Protein; Alkylphosphonate Utilization Operon Protein Phna; Alkylphosphonate Uptake Protein; Protein PhnA; PhnA Zinc-Ribbon Family; Protein Involved In Phosphonate Metabolism; Phosphonate Metabolism Zn-Ribbon-Containing Protein; Phosphonoacetate Hydrolase; Phosphonoacetate Hydrolase PhnA; Phna Protein
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MTENELLSRCGGKCELCGSEIELSIYDLPASDGRDNEIMICETCSGQIAAPDTMDMNHWRCLNDSMWSPVPAVQVMSYRM LKRLNGESWAQDLLDMLYLEDDVKAWGDAEVAAAGDDTTPTLDSNGAVINAGDTVVIIKDLNVKGTSFVAKRGTAVRNIA LTNNPEHIEGRVNGTRIVILTCFVKKS
Sequences:
>Translated_187_residues MTENELLSRCGGKCELCGSEIELSIYDLPASDGRDNEIMICETCSGQIAAPDTMDMNHWRCLNDSMWSPVPAVQVMSYRM LKRLNGESWAQDLLDMLYLEDDVKAWGDAEVAAAGDDTTPTLDSNGAVINAGDTVVIIKDLNVKGTSFVAKRGTAVRNIA LTNNPEHIEGRVNGTRIVILTCFVKKS >Mature_186_residues TENELLSRCGGKCELCGSEIELSIYDLPASDGRDNEIMICETCSGQIAAPDTMDMNHWRCLNDSMWSPVPAVQVMSYRML KRLNGESWAQDLLDMLYLEDDVKAWGDAEVAAAGDDTTPTLDSNGAVINAGDTVVIIKDLNVKGTSFVAKRGTAVRNIAL TNNPEHIEGRVNGTRIVILTCFVKKS
Specific function: Unknown
COG id: COG2824
COG function: function code P; Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20430; Mature: 20299
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTENELLSRCGGKCELCGSEIELSIYDLPASDGRDNEIMICETCSGQIAAPDTMDMNHWR CCHHHHHHHCCCEEEEECCEEEEEEEECCCCCCCCCEEEEEECCCCCEECCCCCCCCCEE CLNDSMWSPVPAVQVMSYRMLKRLNGESWAQDLLDMLYLEDDVKAWGDAEVAAAGDDTTP ECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHCCCCCEEEECCCCCCC TLDSNGAVINAGDTVVIIKDLNVKGTSFVAKRGTAVRNIALTNNPEHIEGRVNGTRIVIL CCCCCCCEEECCCEEEEEEECCCCCCEEEECCCCEEEEEEECCCCCEEEEEECCEEEEEE TCFVKKS EEEEECC >Mature Secondary Structure TENELLSRCGGKCELCGSEIELSIYDLPASDGRDNEIMICETCSGQIAAPDTMDMNHWR CHHHHHHHCCCEEEEECCEEEEEEEECCCCCCCCCEEEEEECCCCCEECCCCCCCCCEE CLNDSMWSPVPAVQVMSYRMLKRLNGESWAQDLLDMLYLEDDVKAWGDAEVAAAGDDTTP ECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHCCCCCEEEECCCCCCC TLDSNGAVINAGDTVVIIKDLNVKGTSFVAKRGTAVRNIALTNNPEHIEGRVNGTRIVIL CCCCCCCEEECCCEEEEEEECCCCCCEEEECCCCEEEEEEECCCCCEEEEEECCEEEEEE TCFVKKS EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA