| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yeeN [C]
Identifier: 160874442
GI number: 160874442
Start: 1572314
End: 1573036
Strand: Reverse
Name: yeeN [C]
Synonym: Sbal195_1323
Alternate gene names: 160874442
Gene position: 1573036-1572314 (Counterclockwise)
Preceding gene: 160874445
Following gene: 160874439
Centisome position: 29.42
GC content: 46.89
Gene sequence:
>723_bases ATGGGCAGAGCATATCAAAACAAGAAAGAATCCATGGCGAAAACAGCCGGTCAAAAAACCCGCATTTATTCACGCTACGG TAAAGAGATTTACGTTGTCGCTAAACAAGGCGGCGTTGAGCCCGATGGAAACTTATCACTGCGTCGCTTGATTGAACGCG CTAAGAAAGACCAAGTGCCTGCGCATGTTATTGAACGCGCAATTGAAAAAGCCAAAGGCGGCGGTGGTGAAGATTACGAT ACCGCCCGTTACGAAGGTTTTGGTCCTGGCAACTGCATGGTCATTGTTGACTGCTTAACCGATAACGTAAAACGTACCTT CACCGAAGTCCGTCAAGCCTTCGTGAAAAACGATGCCAAACTCGGCGGCCCAGGCACTGTTGGCCACATGTTTGATCATC AAGCCGTGTTCGTGTTTGCCGGTGATGACGAAGATGCGATTTTAGAACTGCTGATGATGGCTGACGTTGATGTGAGCGAT GTTGAGCTGGAAGATGGCTTAATCACAGTTTATGCGCCGCACACTGAGTACTTTAAAGTTAAAACTGCACTGACCGAAGC AATGCCAGAGGTTAACTTCGAATTCGACAACATCACCTTCGTACCGCAGGACATGACTAAGGTTGAAGGTGAAGATGTGG CCATGTTTGAAAAGTTTATCGCCGCTTTAGAAGATTGTGACGACGTACAAAACGTCTATCACAATGCGGAAATTGAAGAC TAA
Upstream 100 bases:
>100_bases CCCCGTCGCCTTCTAGGTAATAAATCCCACATGGACGACTGCACTTATGCCAAGAAAACTGCTAATATCGGCGCAATTTT TTTGAGCTAACGAGATCAAG
Downstream 100 bases:
>100_bases GCACCGCTTTCGCCTGAAATAAAACGCAGCCCTTGGCTGCGTTTTTTTATAGGTCAACATATTAAGCGTTAATGAAACAA CCGTGAAACCCTAACGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MGRAYQNKKESMAKTAGQKTRIYSRYGKEIYVVAKQGGVEPDGNLSLRRLIERAKKDQVPAHVIERAIEKAKGGGGEDYD TARYEGFGPGNCMVIVDCLTDNVKRTFTEVRQAFVKNDAKLGGPGTVGHMFDHQAVFVFAGDDEDAILELLMMADVDVSD VELEDGLITVYAPHTEYFKVKTALTEAMPEVNFEFDNITFVPQDMTKVEGEDVAMFEKFIAALEDCDDVQNVYHNAEIED
Sequences:
>Translated_240_residues MGRAYQNKKESMAKTAGQKTRIYSRYGKEIYVVAKQGGVEPDGNLSLRRLIERAKKDQVPAHVIERAIEKAKGGGGEDYD TARYEGFGPGNCMVIVDCLTDNVKRTFTEVRQAFVKNDAKLGGPGTVGHMFDHQAVFVFAGDDEDAILELLMMADVDVSD VELEDGLITVYAPHTEYFKVKTALTEAMPEVNFEFDNITFVPQDMTKVEGEDVAMFEKFIAALEDCDDVQNVYHNAEIED >Mature_239_residues GRAYQNKKESMAKTAGQKTRIYSRYGKEIYVVAKQGGVEPDGNLSLRRLIERAKKDQVPAHVIERAIEKAKGGGGEDYDT ARYEGFGPGNCMVIVDCLTDNVKRTFTEVRQAFVKNDAKLGGPGTVGHMFDHQAVFVFAGDDEDAILELLMMADVDVSDV ELEDGLITVYAPHTEYFKVKTALTEAMPEVNFEFDNITFVPQDMTKVEGEDVAMFEKFIAALEDCDDVQNVYHNAEIED
Specific function: Unknown
COG id: COG0217
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TACO1 family [H]
Homologues:
Organism=Homo sapiens, GI27545315, Length=234, Percent_Identity=25.6410256410256, Blast_Score=69, Evalue=3e-12, Organism=Escherichia coli, GI1788294, Length=235, Percent_Identity=45.1063829787234, Blast_Score=201, Evalue=5e-53, Organism=Escherichia coli, GI1788171, Length=240, Percent_Identity=35.8333333333333, Blast_Score=147, Evalue=6e-37, Organism=Saccharomyces cerevisiae, GI6321458, Length=266, Percent_Identity=28.9473684210526, Blast_Score=75, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002876 - InterPro: IPR017856 [H]
Pfam domain/function: PF01709 DUF28 [H]
EC number: NA
Molecular weight: Translated: 26752; Mature: 26621
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRAYQNKKESMAKTAGQKTRIYSRYGKEIYVVAKQGGVEPDGNLSLRRLIERAKKDQVP CCCCCCHHHHHHHHHCCHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCC AHVIERAIEKAKGGGGEDYDTARYEGFGPGNCMVIVDCLTDNVKRTFTEVRQAFVKNDAK HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEHHHCHHHHHHHHHHHHHHHCCCC LGGPGTVGHMFDHQAVFVFAGDDEDAILELLMMADVDVSDVELEDGLITVYAPHTEYFKV CCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEECCCEEEEEECCCHHHHH KTALTEAMPEVNFEFDNITFVPQDMTKVEGEDVAMFEKFIAALEDCDDVQNVYHNAEIED HHHHHHHCCCCCEEECCEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure GRAYQNKKESMAKTAGQKTRIYSRYGKEIYVVAKQGGVEPDGNLSLRRLIERAKKDQVP CCCCCHHHHHHHHHCCHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCC AHVIERAIEKAKGGGGEDYDTARYEGFGPGNCMVIVDCLTDNVKRTFTEVRQAFVKNDAK HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEHHHCHHHHHHHHHHHHHHHCCCC LGGPGTVGHMFDHQAVFVFAGDDEDAILELLMMADVDVSDVELEDGLITVYAPHTEYFKV CCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEECCCEEEEEECCCHHHHH KTALTEAMPEVNFEFDNITFVPQDMTKVEGEDVAMFEKFIAALEDCDDVQNVYHNAEIED HHHHHHHCCCCCEEECCEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]