| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yxjM [H]
Identifier: 160874439
GI number: 160874439
Start: 1568711
End: 1569874
Strand: Reverse
Name: yxjM [H]
Synonym: Sbal195_1320
Alternate gene names: 160874439
Gene position: 1569874-1568711 (Counterclockwise)
Preceding gene: 160874442
Following gene: 160874438
Centisome position: 29.36
GC content: 49.66
Gene sequence:
>1164_bases GTGCTAGAAAATCGATTAGCAAAAGAAGAGAGCATGTTAATTGCCGCAGGAGTGCTCACTTGGGCATTAGTGGCTTGGGT TGGGATAAACCAAGCCGCATTGCATACATGGCAAGGCATGCTCAATGCCACGCTTTATGGGCTGTATTTAGTGCAATTTA TACTGATAGCTACCGATAAAGTTGCGCATAACAATATTCTGTTTCGTCGCCTTGCCACACTAGCAATGCCGTTGATCGTG TTGAGCTTATTGCTCACGGTAAACCATGCATTGCTGCCGATCCTCTTCGTTATTTGGGCGTCACTTTTGCCTGAGTTTTT TAATCGCCGCCAAGCCATTTCGCAGTTACTGTTAGCCAACATGGTTTATTACGCGCTGCTGCAATGGCATTTGCATGAGC AAAGCAATGTGTTCAATATTTTGATCTATCTTGGCTTTCAATTCTTTGCCTACAGCAGCAGCCAAGCAAGGCTTTCCGAG CGTAAATCACGTTTGATACAAGAACAGCTAAACCAACAGCTTATCGCCACTCGCGCCCTACTTAGCCAAGCCAGCGAACA GCAAGAAAGATTAAGGATCTCCCGCGATTTGCACGACATTCTCGGCCACCAGCTCACAGCACTCTCTCTGCAATTAGAAG TACTGAGCCATAAAGCGCCCGAAGACCTCAAACCTCAAGTTAACCAAAGTAAATCCTTAGCCAAAGAGCTACTTGAAAGT ATTCGCGCCGTCGTCAGGGCTCAAAGAGTGCAAGTGGGATTGGATTTAGTCCCACCTTTAGAGGCGCTGATGACCCGCTT ACCCAGCGTCACTCTTACCTGCAAGACGATGAAACCACTGCAATCAGCCGAACTGACTCAAGCCCTGCTGTTAGTCCTGC AAGAAGGCATCAGCAACGCCGTGCGCCACGGCAAGGCGAATCAACTGCAACTGAGCATGGAAGACTCGCAAAACGCACTG GTATTGCAACTGAGCGACAACGGCGTGGGACTAACGCGGGTAGCCGCGCGAAACGCATCAGCTAAAAGCGGCACAGGACT TTATGGCACAGGGCTTAGCGGCATGCAGGAAAGACTGCAACCTTTTAATGGCAAGGTGCAGCTAAGGGCGAATGACTTGG CGCCCGGCTGCCAACTCACACTCACCCTCCCAGCACTCGCTTAA
Upstream 100 bases:
>100_bases GTCATGAAACAAGATTTTAACAAGATGACTTTTGGCATAGTGACATCTGACGCTGATACCTTAGAATGGACGGCAGAATT GGATTAAGGAATCGTCATTC
Downstream 100 bases:
>100_bases CTTTTTACTAAAAACGCTTTGGAATTTATATGGATACGCAAAACAACATCATCAGTGTCGGCTTAGTAGAAGATCAACAA TTGGTTCGCCAAGGTATCGC
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MLENRLAKEESMLIAAGVLTWALVAWVGINQAALHTWQGMLNATLYGLYLVQFILIATDKVAHNNILFRRLATLAMPLIV LSLLLTVNHALLPILFVIWASLLPEFFNRRQAISQLLLANMVYYALLQWHLHEQSNVFNILIYLGFQFFAYSSSQARLSE RKSRLIQEQLNQQLIATRALLSQASEQQERLRISRDLHDILGHQLTALSLQLEVLSHKAPEDLKPQVNQSKSLAKELLES IRAVVRAQRVQVGLDLVPPLEALMTRLPSVTLTCKTMKPLQSAELTQALLLVLQEGISNAVRHGKANQLQLSMEDSQNAL VLQLSDNGVGLTRVAARNASAKSGTGLYGTGLSGMQERLQPFNGKVQLRANDLAPGCQLTLTLPALA
Sequences:
>Translated_387_residues MLENRLAKEESMLIAAGVLTWALVAWVGINQAALHTWQGMLNATLYGLYLVQFILIATDKVAHNNILFRRLATLAMPLIV LSLLLTVNHALLPILFVIWASLLPEFFNRRQAISQLLLANMVYYALLQWHLHEQSNVFNILIYLGFQFFAYSSSQARLSE RKSRLIQEQLNQQLIATRALLSQASEQQERLRISRDLHDILGHQLTALSLQLEVLSHKAPEDLKPQVNQSKSLAKELLES IRAVVRAQRVQVGLDLVPPLEALMTRLPSVTLTCKTMKPLQSAELTQALLLVLQEGISNAVRHGKANQLQLSMEDSQNAL VLQLSDNGVGLTRVAARNASAKSGTGLYGTGLSGMQERLQPFNGKVQLRANDLAPGCQLTLTLPALA >Mature_387_residues MLENRLAKEESMLIAAGVLTWALVAWVGINQAALHTWQGMLNATLYGLYLVQFILIATDKVAHNNILFRRLATLAMPLIV LSLLLTVNHALLPILFVIWASLLPEFFNRRQAISQLLLANMVYYALLQWHLHEQSNVFNILIYLGFQFFAYSSSQARLSE RKSRLIQEQLNQQLIATRALLSQASEQQERLRISRDLHDILGHQLTALSLQLEVLSHKAPEDLKPQVNQSKSLAKELLES IRAVVRAQRVQVGLDLVPPLEALMTRLPSVTLTCKTMKPLQSAELTQALLLVLQEGISNAVRHGKANQLQLSMEDSQNAL VLQLSDNGVGLTRVAARNASAKSGTGLYGTGLSGMQERLQPFNGKVQLRANDLAPGCQLTLTLPALA
Specific function: Probable member of the two-component regulatory system yxjM/yxjL. May activate yxjL by phosphorylation [H]
COG id: COG4585
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011712 [H]
Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 42938; Mature: 42938
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLENRLAKEESMLIAAGVLTWALVAWVGINQAALHTWQGMLNATLYGLYLVQFILIATDK CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAHNNILFRRLATLAMPLIVLSLLLTVNHALLPILFVIWASLLPEFFNRRQAISQLLLAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVYYALLQWHLHEQSNVFNILIYLGFQFFAYSSSQARLSERKSRLIQEQLNQQLIATRAL HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LSQASEQQERLRISRDLHDILGHQLTALSLQLEVLSHKAPEDLKPQVNQSKSLAKELLES HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH IRAVVRAQRVQVGLDLVPPLEALMTRLPSVTLTCKTMKPLQSAELTQALLLVLQEGISNA HHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH VRHGKANQLQLSMEDSQNALVLQLSDNGVGLTRVAARNASAKSGTGLYGTGLSGMQERLQ HHCCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHC PFNGKVQLRANDLAPGCQLTLTLPALA CCCCEEEEEECCCCCCCEEEEECCCCC >Mature Secondary Structure MLENRLAKEESMLIAAGVLTWALVAWVGINQAALHTWQGMLNATLYGLYLVQFILIATDK CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAHNNILFRRLATLAMPLIVLSLLLTVNHALLPILFVIWASLLPEFFNRRQAISQLLLAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVYYALLQWHLHEQSNVFNILIYLGFQFFAYSSSQARLSERKSRLIQEQLNQQLIATRAL HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LSQASEQQERLRISRDLHDILGHQLTALSLQLEVLSHKAPEDLKPQVNQSKSLAKELLES HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH IRAVVRAQRVQVGLDLVPPLEALMTRLPSVTLTCKTMKPLQSAELTQALLLVLQEGISNA HHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH VRHGKANQLQLSMEDSQNALVLQLSDNGVGLTRVAARNASAKSGTGLYGTGLSGMQERLQ HHCCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHC PFNGKVQLRANDLAPGCQLTLTLPALA CCCCEEEEEECCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8978088; 8969509; 9384377 [H]