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The map label for this gene is yfjD [H]

Identifier: 160874403

GI number: 160874403

Start: 1521637

End: 1522911

Strand: Reverse

Name: yfjD [H]

Synonym: Sbal195_1284

Alternate gene names: 160874403

Gene position: 1522911-1521637 (Counterclockwise)

Preceding gene: 160874404

Following gene: 160874390

Centisome position: 28.48

GC content: 47.06

Gene sequence:

>1275_bases
TTGGACGCTATATCGACAAGCGCACTCCTGATCGTTTTACTAGTGCTTATCCTATTCTCTGCCTATTTCTCAGGCTCAGA
AACCGCCATGATGACACTCAACCGTTACCGTCTACGCCACTTAGCCAGCAATGGCCATAAAGGGGCGATTAGAGCTCTGA
AGTTGCTTGAGCGTCCAGACCGTTTGATTGGCTTAATATTAATCGGCAATAACTTAGTCAATATTTTAGCATCGGCTATC
GCCACCATTATTGGTATGCGCCTCTGGGGGGACTTAGGTGTCGCCATCGCTACCGGTGTGCTGACACTCGTTGTATTAGT
ATTTGCTGAAGTCACCCCCAAAACCATCGCCGCACTAAATCCCGAACGTATCGCCTTCCCCTCCAGCATACTGCTGCGCT
GGTTGTTGATCCTATTAGCGCCCTTCGTGAAAGGCGTAAACCTCATCACGTCAGGCTTTTTACGTTTAATGGGAATTAAA
ACCGTCAATAGTAGCGATGCGTTAAGCCAAGAAGAGTTGCGCACTGTCGTACATGAAGCTGGGGCACTTATCCCCCAACG
TCACCAAGAAATGCTGTTATCTATCCTAGATTTAGAGAAAGTCACCGTTGAAGACATTATGGTGCCGCGCTCAGATATCT
ACGGGATTAACGTCAATGACGAGTTTAAGGTCATCAATCGGCAGGTCATCCAAAGTCCACACACCCGAGTGTTAGTGTAT
CGCGACACAGTTGACGATGCGGTGGGCTTTATTCATTTGCGCGATGCCCTGCGATTACAATCGAAAGAGCAATTCAGTAA
GTCATCTCTGCTGCGCGCAGTGAAAGAACTCTATTTTGTGCCTGAAGGTACGCCACTCAATGTGCAGCTGGCTAACTTTC
AACAGAACAAAGAGCGCATCGGCTTAGTGGTTGATGAATATGGCGATATTCAAGGTCTGGTGACGCTCGAAGATATTCTC
GAAGAGATTGTCGGCGACTTTACTACTTCAATGTTAACCACGCCGAGTGAAGATATCAAAGTGCAGCAAGATGGCAGTTA
CTTAGTCGATGCCAGCATTACCATTCGCGATTTGAATAAAGAAATGAAGTGGAACTTCCCGACCGACGGCCCTAAAACCC
TCAACGGTCTGATCCTAGAATACCTAGAGGAAATCCCCTCAGCTAACACCAGTTTACGTTTAGCCGGTTATCCCTTAGAG
ATCATCGATGTAGCAGAAAATATGATTAAAACTGTGCGAATCATACCGCTGCATTATCACCCGCCCAGAGCTTAG

Upstream 100 bases:

>100_bases
AACATTTAAGTCGGCAAAGGCAGTTAATGCCGCTGCCGACTTGACACTTTTTTTAAATGTCGGTATTTACTTAAGTTTAC
TGGCCATATTGGAGCCTTTT

Downstream 100 bases:

>100_bases
CTTTCGATTTGCCCCATAAAAAATCGGCCGAACCACATACTAATATGTAGTCCGGCCGACTGCTCCCCCGAGCAATACTT
TTCCCAAGTGATGTAACGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MDAISTSALLIVLLVLILFSAYFSGSETAMMTLNRYRLRHLASNGHKGAIRALKLLERPDRLIGLILIGNNLVNILASAI
ATIIGMRLWGDLGVAIATGVLTLVVLVFAEVTPKTIAALNPERIAFPSSILLRWLLILLAPFVKGVNLITSGFLRLMGIK
TVNSSDALSQEELRTVVHEAGALIPQRHQEMLLSILDLEKVTVEDIMVPRSDIYGINVNDEFKVINRQVIQSPHTRVLVY
RDTVDDAVGFIHLRDALRLQSKEQFSKSSLLRAVKELYFVPEGTPLNVQLANFQQNKERIGLVVDEYGDIQGLVTLEDIL
EEIVGDFTTSMLTTPSEDIKVQQDGSYLVDASITIRDLNKEMKWNFPTDGPKTLNGLILEYLEEIPSANTSLRLAGYPLE
IIDVAENMIKTVRIIPLHYHPPRA

Sequences:

>Translated_424_residues
MDAISTSALLIVLLVLILFSAYFSGSETAMMTLNRYRLRHLASNGHKGAIRALKLLERPDRLIGLILIGNNLVNILASAI
ATIIGMRLWGDLGVAIATGVLTLVVLVFAEVTPKTIAALNPERIAFPSSILLRWLLILLAPFVKGVNLITSGFLRLMGIK
TVNSSDALSQEELRTVVHEAGALIPQRHQEMLLSILDLEKVTVEDIMVPRSDIYGINVNDEFKVINRQVIQSPHTRVLVY
RDTVDDAVGFIHLRDALRLQSKEQFSKSSLLRAVKELYFVPEGTPLNVQLANFQQNKERIGLVVDEYGDIQGLVTLEDIL
EEIVGDFTTSMLTTPSEDIKVQQDGSYLVDASITIRDLNKEMKWNFPTDGPKTLNGLILEYLEEIPSANTSLRLAGYPLE
IIDVAENMIKTVRIIPLHYHPPRA
>Mature_424_residues
MDAISTSALLIVLLVLILFSAYFSGSETAMMTLNRYRLRHLASNGHKGAIRALKLLERPDRLIGLILIGNNLVNILASAI
ATIIGMRLWGDLGVAIATGVLTLVVLVFAEVTPKTIAALNPERIAFPSSILLRWLLILLAPFVKGVNLITSGFLRLMGIK
TVNSSDALSQEELRTVVHEAGALIPQRHQEMLLSILDLEKVTVEDIMVPRSDIYGINVNDEFKVINRQVIQSPHTRVLVY
RDTVDDAVGFIHLRDALRLQSKEQFSKSSLLRAVKELYFVPEGTPLNVQLANFQQNKERIGLVVDEYGDIQGLVTLEDIL
EEIVGDFTTSMLTTPSEDIKVQQDGSYLVDASITIRDLNKEMKWNFPTDGPKTLNGLILEYLEEIPSANTSLRLAGYPLE
IIDVAENMIKTVRIIPLHYHPPRA

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=363, Percent_Identity=25.068870523416, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI94681046, Length=316, Percent_Identity=24.3670886075949, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI40068053, Length=326, Percent_Identity=23.3128834355828, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI40068055, Length=326, Percent_Identity=23.3128834355828, Blast_Score=69, Evalue=6e-12,
Organism=Escherichia coli, GI145693175, Length=399, Percent_Identity=61.1528822055138, Blast_Score=503, Evalue=1e-144,
Organism=Escherichia coli, GI1790664, Length=414, Percent_Identity=26.0869565217391, Blast_Score=157, Evalue=9e-40,
Organism=Escherichia coli, GI87082033, Length=274, Percent_Identity=28.8321167883212, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1786879, Length=275, Percent_Identity=26.5454545454545, Blast_Score=99, Evalue=7e-22,
Organism=Escherichia coli, GI1788119, Length=271, Percent_Identity=24.7232472324723, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 47149; Mature: 47149

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAISTSALLIVLLVLILFSAYFSGSETAMMTLNRYRLRHLASNGHKGAIRALKLLERPD
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
RLIGLILIGNNLVNILASAIATIIGMRLWGDLGVAIATGVLTLVVLVFAEVTPKTIAALN
CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
PERIAFPSSILLRWLLILLAPFVKGVNLITSGFLRLMGIKTVNSSDALSQEELRTVVHEA
CCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCCHHHHHHHHHHH
GALIPQRHQEMLLSILDLEKVTVEDIMVPRSDIYGINVNDEFKVINRQVIQSPHTRVLVY
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCCCEEEEE
RDTVDDAVGFIHLRDALRLQSKEQFSKSSLLRAVKELYFVPEGTPLNVQLANFQQNKERI
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHC
GLVVDEYGDIQGLVTLEDILEEIVGDFTTSMLTTPSEDIKVQQDGSYLVDASITIRDLNK
CEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCHHCEEECCCCEEEEEEEEEEECCC
EMKWNFPTDGPKTLNGLILEYLEEIPSANTSLRLAGYPLEIIDVAENMIKTVRIIPLHYH
HHCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHEEEEEEECC
PPRA
CCCC
>Mature Secondary Structure
MDAISTSALLIVLLVLILFSAYFSGSETAMMTLNRYRLRHLASNGHKGAIRALKLLERPD
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
RLIGLILIGNNLVNILASAIATIIGMRLWGDLGVAIATGVLTLVVLVFAEVTPKTIAALN
CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
PERIAFPSSILLRWLLILLAPFVKGVNLITSGFLRLMGIKTVNSSDALSQEELRTVVHEA
CCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCCHHHHHHHHHHH
GALIPQRHQEMLLSILDLEKVTVEDIMVPRSDIYGINVNDEFKVINRQVIQSPHTRVLVY
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCCCEEEEE
RDTVDDAVGFIHLRDALRLQSKEQFSKSSLLRAVKELYFVPEGTPLNVQLANFQQNKERI
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHC
GLVVDEYGDIQGLVTLEDILEEIVGDFTTSMLTTPSEDIKVQQDGSYLVDASITIRDLNK
CEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCHHCEEECCCCEEEEEEEEEEECCC
EMKWNFPTDGPKTLNGLILEYLEEIPSANTSLRLAGYPLEIIDVAENMIKTVRIIPLHYH
HHCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHEEEEEEECC
PPRA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 3045760 [H]