Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160874304
Identifier: 160874304
GI number: 160874304
Start: 1404766
End: 1405131
Strand: Reverse
Name: 160874304
Synonym: Sbal195_1184
Alternate gene names: NA
Gene position: 1405131-1404766 (Counterclockwise)
Preceding gene: 160874305
Following gene: 160874303
Centisome position: 26.28
GC content: 44.54
Gene sequence:
>366_bases ATGACTGTGAGTATCAACGCCATTATTCGCTTTGCTACGGCGCAAACACCCATCGAAACCTATCAGTTACCGACGGAAAA GTTGTTAGCAGGCAATCCAACTCAAGGGCTAGAGAATCATTATTCTAGTCCTTGTGATCAATTTCACAGTGGAATTTGGC AAAGTGAATCAGGCGCTTGGAAAATAAACTACACTGAATACGAGTACTGTGAAATCCTCGAAGGGATAAGTGTTATCACC GATCTTCAAGGTCAATCGCAGACGTTCACTGTGGGCGACAGGTTTATTATACCCGCGGGTTTTCAAGGCACTTGGGAAGT AGTGGAACCCTGCCGCAAGGTTTACGTCATTTTCGAACAAAAGTGA
Upstream 100 bases:
>100_bases GGCAATTACTGCCCGCTGGCCCGTGGGTAAACAGACTCAAGCCGAGTTTGTAATGCCTACGATGAAATAGCCGAATGCCA GCTCAACAAGGAAATCGCAA
Downstream 100 bases:
>100_bases GATCAACGAGGCTGATGTTAGCCTCAAAAAAGCTAAGTTATCTTAGCAATAACTCGCCATGAGGTCACAGCAACGGGTTT TCCTAGGCTGTTGTTTGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MTVSINAIIRFATAQTPIETYQLPTEKLLAGNPTQGLENHYSSPCDQFHSGIWQSESGAWKINYTEYEYCEILEGISVIT DLQGQSQTFTVGDRFIIPAGFQGTWEVVEPCRKVYVIFEQK
Sequences:
>Translated_121_residues MTVSINAIIRFATAQTPIETYQLPTEKLLAGNPTQGLENHYSSPCDQFHSGIWQSESGAWKINYTEYEYCEILEGISVIT DLQGQSQTFTVGDRFIIPAGFQGTWEVVEPCRKVYVIFEQK >Mature_120_residues TVSINAIIRFATAQTPIETYQLPTEKLLAGNPTQGLENHYSSPCDQFHSGIWQSESGAWKINYTEYEYCEILEGISVITD LQGQSQTFTVGDRFIIPAGFQGTWEVVEPCRKVYVIFEQK
Specific function: Unknown
COG id: COG3450
COG function: function code R; Predicted enzyme of the cupin superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13701; Mature: 13569
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSINAIIRFATAQTPIETYQLPTEKLLAGNPTQGLENHYSSPCDQFHSGIWQSESGAW CEEEHHEEEEECCCCCCHHHHCCCHHHHHCCCCCCCHHHHCCCCHHHHHCCCCCCCCCCE KINYTEYEYCEILEGISVITDLQGQSQTFTVGDRFIIPAGFQGTWEVVEPCRKVYVIFEQ EEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEECCCCCCHHHHHHHHHEEEEEEC K C >Mature Secondary Structure TVSINAIIRFATAQTPIETYQLPTEKLLAGNPTQGLENHYSSPCDQFHSGIWQSESGAW EEEHHEEEEECCCCCCHHHHCCCHHHHHCCCCCCCHHHHCCCCHHHHHCCCCCCCCCCE KINYTEYEYCEILEGISVITDLQGQSQTFTVGDRFIIPAGFQGTWEVVEPCRKVYVIFEQ EEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEECCCCCCHHHHHHHHHEEEEEEC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA