| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is purK [H]
Identifier: 160874256
GI number: 160874256
Start: 1346356
End: 1347459
Strand: Reverse
Name: purK [H]
Synonym: Sbal195_1136
Alternate gene names: 160874256
Gene position: 1347459-1346356 (Counterclockwise)
Preceding gene: 160874257
Following gene: 160874255
Centisome position: 25.2
GC content: 49.09
Gene sequence:
>1104_bases ATGACCCAGACAAACACTAAACCTAAGGTTTGGGTATTAGGTAATGGTCAGCTGGGCGCCATGTTAACCCACGCTGGCGA GCCATTAGCGATTGAAGTTAACGCCGTTGATATCATGACGCCTACGGATGACATCCTGCCACTCGCGCCACACGACATCA TCACCGCCGAGCGCGAACAGTGGCCTGAATCCGCCCTTAGCTTACAACTCAGCTCACACCCCCATTTTGTTAATGGTCCG GTATTTAGCCGTTTAGCCGACCGTTTTAGCCAAAAAAGTCTACTCGACCAGCTCAGTGTTCCCACAGCGCCTTGGACCTT AGTTGACGATAACACCCAAGTCGATACCCTGTATCAGCACTATGGCCCAAGAGTCTTGATGAAACGCCGTACCGGTGGTT ATGACGGTAAAGGTCAACACTGGCTTAAACAAGCCGAAGCGGGTGATATTCCAAACGATTGGCGTAACCTTGCAATTGCT GAGCAAGCGATTAATTTTGATGAAGAAGTATCATTAGTTGGCGTCCGTACTCGCGAAGGCGAATGCGTGTTTTATCCGCT GACGCTGAACTTACATCAAGATGGCATTTTAATGGCGTCGATTTCGCCACTGACACGCTTAAGCCTTTTGCAAGCCCAAG CCGAAGCTATGCTCAGCGCCATTATGCATGAGCTTGAATACGTTGGCGTGATGGCGATGGAATGCTTCCGTGTTGGCGAT GAGTTATTGGTGAATGAACTGGCACCGCGAGTGCACAACTCAGGCCATTGGACTCAAGCCGGAACCCATATGGATCAATT CCAGCTGCATTTGCGTGCACTTTGCGGAATTGCGATCCCACAGCCACAAGTGAATTTTCAGTGTGTTATGGTCAATCTTA TCGGTATCGATAATGATCCACGCTGGTTAAGTTTGCCTAATGCTGAGTTGTACTGGTACAACAAAGAAGTGCGCCCTGGT CGTAAAGTTGGCCATTTGAACCTATCAGTGCCTAACCAAACTGTGCTCAACCAGAGCATAGCCGCACTGCAAAAGTGGAT GCCCATCCAATACCAAGCTCCTTTAGCCTGGATATTGGCCGAATACGCAGAAAATTCGCGTTAA
Upstream 100 bases:
>100_bases TCCTTGCGAATAACGATGCTGAATTAGCGGCTCGTGTTGACGCTTTCAGAGAAGAACAGACCCGTGCGGTACTGGACAAT CCAGATCCGAGGGAAGTTTA
Downstream 100 bases:
>100_bases TTCAGTATTTAGTACCAAAATCACTGATATGAAATTGTTCGCAGTTTCATATCAGTTTATATTTCAATTTTCGTTATATA CTTAACAGAACTCAGTGTGG
Product: phosphoribosylaminoimidazole carboxylase ATPase subunit
Products: NA
Alternate protein names: N5-CAIR synthase; 5-(carboxyamino)imidazole ribonucleotide synthetase [H]
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MTQTNTKPKVWVLGNGQLGAMLTHAGEPLAIEVNAVDIMTPTDDILPLAPHDIITAEREQWPESALSLQLSSHPHFVNGP VFSRLADRFSQKSLLDQLSVPTAPWTLVDDNTQVDTLYQHYGPRVLMKRRTGGYDGKGQHWLKQAEAGDIPNDWRNLAIA EQAINFDEEVSLVGVRTREGECVFYPLTLNLHQDGILMASISPLTRLSLLQAQAEAMLSAIMHELEYVGVMAMECFRVGD ELLVNELAPRVHNSGHWTQAGTHMDQFQLHLRALCGIAIPQPQVNFQCVMVNLIGIDNDPRWLSLPNAELYWYNKEVRPG RKVGHLNLSVPNQTVLNQSIAALQKWMPIQYQAPLAWILAEYAENSR
Sequences:
>Translated_367_residues MTQTNTKPKVWVLGNGQLGAMLTHAGEPLAIEVNAVDIMTPTDDILPLAPHDIITAEREQWPESALSLQLSSHPHFVNGP VFSRLADRFSQKSLLDQLSVPTAPWTLVDDNTQVDTLYQHYGPRVLMKRRTGGYDGKGQHWLKQAEAGDIPNDWRNLAIA EQAINFDEEVSLVGVRTREGECVFYPLTLNLHQDGILMASISPLTRLSLLQAQAEAMLSAIMHELEYVGVMAMECFRVGD ELLVNELAPRVHNSGHWTQAGTHMDQFQLHLRALCGIAIPQPQVNFQCVMVNLIGIDNDPRWLSLPNAELYWYNKEVRPG RKVGHLNLSVPNQTVLNQSIAALQKWMPIQYQAPLAWILAEYAENSR >Mature_366_residues TQTNTKPKVWVLGNGQLGAMLTHAGEPLAIEVNAVDIMTPTDDILPLAPHDIITAEREQWPESALSLQLSSHPHFVNGPV FSRLADRFSQKSLLDQLSVPTAPWTLVDDNTQVDTLYQHYGPRVLMKRRTGGYDGKGQHWLKQAEAGDIPNDWRNLAIAE QAINFDEEVSLVGVRTREGECVFYPLTLNLHQDGILMASISPLTRLSLLQAQAEAMLSAIMHELEYVGVMAMECFRVGDE LLVNELAPRVHNSGHWTQAGTHMDQFQLHLRALCGIAIPQPQVNFQCVMVNLIGIDNDPRWLSLPNAELYWYNKEVRPGR KVGHLNLSVPNQTVLNQSIAALQKWMPIQYQAPLAWILAEYAENSR
Specific function: Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) [H]
COG id: COG0026
COG function: function code F; Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Escherichia coli, GI1786733, Length=358, Percent_Identity=51.6759776536313, Blast_Score=344, Evalue=6e-96, Organism=Escherichia coli, GI1788155, Length=239, Percent_Identity=23.8493723849372, Blast_Score=64, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6324702, Length=361, Percent_Identity=28.2548476454294, Blast_Score=125, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005875 - InterPro: IPR011761 - InterPro: IPR003135 - InterPro: IPR013816 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 [H]
Pfam domain/function: PF02222 ATP-grasp [H]
EC number: =6.3.4.18 [H]
Molecular weight: Translated: 41160; Mature: 41028
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTNTKPKVWVLGNGQLGAMLTHAGEPLAIEVNAVDIMTPTDDILPLAPHDIITAEREQ CCCCCCCCEEEEEECCCEEEHEECCCCCEEEEEEEEEEECCCCCCCCCCCCHHEECCHHH WPESALSLQLSSHPHFVNGPVFSRLADRFSQKSLLDQLSVPTAPWTLVDDNTQVDTLYQH CCCHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHH YGPRVLMKRRTGGYDGKGQHWLKQAEAGDIPNDWRNLAIAEQAINFDEEVSLVGVRTREG CCCEEEEEECCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCC ECVFYPLTLNLHQDGILMASISPLTRLSLLQAQAEAMLSAIMHELEYVGVMAMECFRVGD CEEEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH ELLVNELAPRVHNSGHWTQAGTHMDQFQLHLRALCGIAIPQPQVNFQCVMVNLIGIDNDP HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCC RWLSLPNAELYWYNKEVRPGRKVGHLNLSVPNQTVLNQSIAALQKWMPIQYQAPLAWILA CEEECCCCEEEEECCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCEECCCHHHHHH EYAENSR HHHHCCC >Mature Secondary Structure TQTNTKPKVWVLGNGQLGAMLTHAGEPLAIEVNAVDIMTPTDDILPLAPHDIITAEREQ CCCCCCCEEEEEECCCEEEHEECCCCCEEEEEEEEEEECCCCCCCCCCCCHHEECCHHH WPESALSLQLSSHPHFVNGPVFSRLADRFSQKSLLDQLSVPTAPWTLVDDNTQVDTLYQH CCCHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHH YGPRVLMKRRTGGYDGKGQHWLKQAEAGDIPNDWRNLAIAEQAINFDEEVSLVGVRTREG CCCEEEEEECCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCC ECVFYPLTLNLHQDGILMASISPLTRLSLLQAQAEAMLSAIMHELEYVGVMAMECFRVGD CEEEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH ELLVNELAPRVHNSGHWTQAGTHMDQFQLHLRALCGIAIPQPQVNFQCVMVNLIGIDNDP HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCC RWLSLPNAELYWYNKEVRPGRKVGHLNLSVPNQTVLNQSIAALQKWMPIQYQAPLAWILA CEEECCCCEEEEECCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCEECCCHHHHHH EYAENSR HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]