| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is gltT [H]
Identifier: 160874249
GI number: 160874249
Start: 1336614
End: 1337873
Strand: Reverse
Name: gltT [H]
Synonym: Sbal195_1129
Alternate gene names: 160874249
Gene position: 1337873-1336614 (Counterclockwise)
Preceding gene: 160874255
Following gene: 160874248
Centisome position: 25.02
GC content: 48.49
Gene sequence:
>1260_bases ATGATCCTTCAAACCATTAGCCGCATTCCGTTTTGGCAAAAAGTCTTAGCAGGCTTTATCTTAGGTGCGCTCGTTGGCGT TATTTTAGGTGAAAGCGCTACAGTGCTAAAACCACTCGGAGATCTGTTCATTGGCGCCATTAAGATGTTGGTCGCGCCTT TGGTATTTTGTGCCATTGTCGTCAGTATCACGTCGCTAGGCTCGCAAACTAGCCTGAAACGCTTGAGCCTTAAAACCTTA GGCATGTTCATGCTGACAGGCACGATTGCCTCGCTGATTGGCTTAGCCGTAGGTTCAATGATCGACATGGGCGGCACTAT GCAGCTCACGGCAACGGAAGTGCGCGAGCGTAATATTCCCGGTTTTGCACAAGTGTTGCTCGATATGATACCAGTCAATC CTTTCGCCTCACTGGCTGAAGGCAAGGTACTGCAAATTATCGTGTTTGCCGCGTTAGTGGGTATCGCTATCAATAAAGTC GGCGAGAAAGCTGAGCCGCTAAAACGCACCATAGAAGCGGGCGCAGAAGTCATGTTCCAACTGACTCGCATGGTCTTAAA ACTAACCCCTATCGGTGTGTTTGGTTTAATGGCTTGGGTTGTCGGTGAATACGGTTTATCAACTCTACTGCCTTTAGGTA AGTTTATCGGGGCTATCTACATTGCCGCCTTTATCCACATCATCTTTGTCTACGGTGGCTTAGTGAAATTTGTCGGTGGT TTAAGCCCACTGCAATTTTTCCGCAAAGCTATGCCAGCGCAGTTAGTCGCCTTTAGTACTTCTTCAAGTTTCGGTACTTT ACCTGCGAGTACACGTGCAGTCGAAACCATGGGCGTATCAAAGCGTTATAGCGCCTTTGTGATGCCATTAGGTGCGACGA TGAACATGGACGGCTGTGGGGGTATTTATCCTGCGATTGCCGCTATCTTCATCGCGCAGATTTACAATATTCCGCTCGAT ACACTGGACTATGTGATGATTGCCGTGACTGCGACCGTCGCTTCTGTTGGTACCGCTGGCGTGCCGGGAAGTGCAATGGT GATGTTAACTGTGACCTTAGGTGTGATTGGTCTGCCACTTGAAGGCATTGCCTTTATCGCCGCGATTGACCGTATTATCG ATATGATCCGCACGGCAACGAACGTGACGGGCGATATGATGACAGCAGTCGTGATTGGTAAATCAGAAAATGAACTCGAT GAAGCGCAGTTCTATTCGAACGATACCCAAGACGTTACACCTGTGAGTTCGCAGCAATAA
Upstream 100 bases:
>100_bases ATGACTGAGAGCGCGTTAACATCACGCTCAACTCGTTGAATACGAATCCTATCATCGCAGGTCTATTGGCTCACTCTTAA TTTATTTTTCTGGAATATGC
Downstream 100 bases:
>100_bases CAATACTGGATCGAAGCCACTGCGCTAAACCATCAGTAACATTGCGTAAATTGCGCAGATGATGTAAATCAAGAGACCGC TTAGGCGGTCTTTTTTATTA
Product: sodium:dicarboxylate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MILQTISRIPFWQKVLAGFILGALVGVILGESATVLKPLGDLFIGAIKMLVAPLVFCAIVVSITSLGSQTSLKRLSLKTL GMFMLTGTIASLIGLAVGSMIDMGGTMQLTATEVRERNIPGFAQVLLDMIPVNPFASLAEGKVLQIIVFAALVGIAINKV GEKAEPLKRTIEAGAEVMFQLTRMVLKLTPIGVFGLMAWVVGEYGLSTLLPLGKFIGAIYIAAFIHIIFVYGGLVKFVGG LSPLQFFRKAMPAQLVAFSTSSSFGTLPASTRAVETMGVSKRYSAFVMPLGATMNMDGCGGIYPAIAAIFIAQIYNIPLD TLDYVMIAVTATVASVGTAGVPGSAMVMLTVTLGVIGLPLEGIAFIAAIDRIIDMIRTATNVTGDMMTAVVIGKSENELD EAQFYSNDTQDVTPVSSQQ
Sequences:
>Translated_419_residues MILQTISRIPFWQKVLAGFILGALVGVILGESATVLKPLGDLFIGAIKMLVAPLVFCAIVVSITSLGSQTSLKRLSLKTL GMFMLTGTIASLIGLAVGSMIDMGGTMQLTATEVRERNIPGFAQVLLDMIPVNPFASLAEGKVLQIIVFAALVGIAINKV GEKAEPLKRTIEAGAEVMFQLTRMVLKLTPIGVFGLMAWVVGEYGLSTLLPLGKFIGAIYIAAFIHIIFVYGGLVKFVGG LSPLQFFRKAMPAQLVAFSTSSSFGTLPASTRAVETMGVSKRYSAFVMPLGATMNMDGCGGIYPAIAAIFIAQIYNIPLD TLDYVMIAVTATVASVGTAGVPGSAMVMLTVTLGVIGLPLEGIAFIAAIDRIIDMIRTATNVTGDMMTAVVIGKSENELD EAQFYSNDTQDVTPVSSQQ >Mature_419_residues MILQTISRIPFWQKVLAGFILGALVGVILGESATVLKPLGDLFIGAIKMLVAPLVFCAIVVSITSLGSQTSLKRLSLKTL GMFMLTGTIASLIGLAVGSMIDMGGTMQLTATEVRERNIPGFAQVLLDMIPVNPFASLAEGKVLQIIVFAALVGIAINKV GEKAEPLKRTIEAGAEVMFQLTRMVLKLTPIGVFGLMAWVVGEYGLSTLLPLGKFIGAIYIAAFIHIIFVYGGLVKFVGG LSPLQFFRKAMPAQLVAFSTSSSFGTLPASTRAVETMGVSKRYSAFVMPLGATMNMDGCGGIYPAIAAIFIAQIYNIPLD TLDYVMIAVTATVASVGTAGVPGSAMVMLTVTLGVIGLPLEGIAFIAAIDRIIDMIRTATNVTGDMMTAVVIGKSENELD EAQFYSNDTQDVTPVSSQQ
Specific function: This carrier protein is part of the Na(+)-dependent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI4827012, Length=291, Percent_Identity=34.7079037800687, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI21314632, Length=442, Percent_Identity=28.7330316742081, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI169790839, Length=297, Percent_Identity=31.986531986532, Blast_Score=139, Evalue=5e-33, Organism=Homo sapiens, GI194239697, Length=287, Percent_Identity=32.7526132404181, Blast_Score=139, Evalue=7e-33, Organism=Homo sapiens, GI66773030, Length=276, Percent_Identity=34.4202898550725, Blast_Score=138, Evalue=8e-33, Organism=Homo sapiens, GI223468566, Length=304, Percent_Identity=33.2236842105263, Blast_Score=137, Evalue=3e-32, Organism=Homo sapiens, GI40254478, Length=289, Percent_Identity=32.1799307958478, Blast_Score=135, Evalue=1e-31, Organism=Homo sapiens, GI223468564, Length=272, Percent_Identity=33.4558823529412, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI5032093, Length=304, Percent_Identity=33.2236842105263, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI301601644, Length=206, Percent_Identity=34.9514563106796, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI262359914, Length=180, Percent_Identity=31.6666666666667, Blast_Score=82, Evalue=6e-16, Organism=Escherichia coli, GI1790514, Length=413, Percent_Identity=35.3510895883777, Blast_Score=236, Evalue=3e-63, Organism=Escherichia coli, GI1789947, Length=405, Percent_Identity=33.0864197530864, Blast_Score=223, Evalue=1e-59, Organism=Escherichia coli, GI1788024, Length=409, Percent_Identity=31.2958435207824, Blast_Score=171, Evalue=1e-43, Organism=Escherichia coli, GI1789473, Length=376, Percent_Identity=22.8723404255319, Blast_Score=82, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17537407, Length=438, Percent_Identity=28.7671232876712, Blast_Score=147, Evalue=8e-36, Organism=Caenorhabditis elegans, GI71996953, Length=471, Percent_Identity=28.2377919320594, Blast_Score=145, Evalue=4e-35, Organism=Caenorhabditis elegans, GI71983106, Length=442, Percent_Identity=28.9592760180996, Blast_Score=141, Evalue=6e-34, Organism=Caenorhabditis elegans, GI71983099, Length=442, Percent_Identity=28.9592760180996, Blast_Score=141, Evalue=6e-34, Organism=Caenorhabditis elegans, GI17541374, Length=439, Percent_Identity=26.4236902050114, Blast_Score=139, Evalue=3e-33, Organism=Caenorhabditis elegans, GI193206654, Length=428, Percent_Identity=27.5700934579439, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI193206505, Length=411, Percent_Identity=25.7907542579075, Blast_Score=134, Evalue=7e-32, Organism=Drosophila melanogaster, GI24583025, Length=447, Percent_Identity=25.7270693512304, Blast_Score=131, Evalue=9e-31, Organism=Drosophila melanogaster, GI17137668, Length=447, Percent_Identity=25.7270693512304, Blast_Score=131, Evalue=9e-31, Organism=Drosophila melanogaster, GI24583023, Length=447, Percent_Identity=25.7270693512304, Blast_Score=131, Evalue=9e-31, Organism=Drosophila melanogaster, GI281360481, Length=465, Percent_Identity=27.0967741935484, Blast_Score=99, Evalue=6e-21, Organism=Drosophila melanogaster, GI281360483, Length=465, Percent_Identity=27.0967741935484, Blast_Score=99, Evalue=8e-21, Organism=Drosophila melanogaster, GI17137666, Length=465, Percent_Identity=27.0967741935484, Blast_Score=99, Evalue=8e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 44192; Mature: 44192
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: PS00713 NA_DICARBOXYL_SYMP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILQTISRIPFWQKVLAGFILGALVGVILGESATVLKPLGDLFIGAIKMLVAPLVFCAIV CCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSITSLGSQTSLKRLSLKTLGMFMLTGTIASLIGLAVGSMIDMGGTMQLTATEVRERNIP HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHCCCC GFAQVLLDMIPVNPFASLAEGKVLQIIVFAALVGIAINKVGEKAEPLKRTIEAGAEVMFQ HHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LTRMVLKLTPIGVFGLMAWVVGEYGLSTLLPLGKFIGAIYIAAFIHIIFVYGGLVKFVGG HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LSPLQFFRKAMPAQLVAFSTSSSFGTLPASTRAVETMGVSKRYSAFVMPLGATMNMDGCG CCHHHHHHHHCCHHHEEEECCCCCCCCCCCHHHHHHHCCHHHHHHHEEECCCEECCCCCC GIYPAIAAIFIAQIYNIPLDTLDYVMIAVTATVASVGTAGVPGSAMVMLTVTLGVIGLPL CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCH EGIAFIAAIDRIIDMIRTATNVTGDMMTAVVIGKSENELDEAQFYSNDTQDVTPVSSQQ HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEECCCCCHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MILQTISRIPFWQKVLAGFILGALVGVILGESATVLKPLGDLFIGAIKMLVAPLVFCAIV CCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSITSLGSQTSLKRLSLKTLGMFMLTGTIASLIGLAVGSMIDMGGTMQLTATEVRERNIP HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHCCCC GFAQVLLDMIPVNPFASLAEGKVLQIIVFAALVGIAINKVGEKAEPLKRTIEAGAEVMFQ HHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LTRMVLKLTPIGVFGLMAWVVGEYGLSTLLPLGKFIGAIYIAAFIHIIFVYGGLVKFVGG HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LSPLQFFRKAMPAQLVAFSTSSSFGTLPASTRAVETMGVSKRYSAFVMPLGATMNMDGCG CCHHHHHHHHCCHHHEEEECCCCCCCCCCCHHHHHHHCCHHHHHHHEEECCCEECCCCCC GIYPAIAAIFIAQIYNIPLDTLDYVMIAVTATVASVGTAGVPGSAMVMLTVTLGVIGLPL CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCH EGIAFIAAIDRIIDMIRTATNVTGDMMTAVVIGKSENELDEAQFYSNDTQDVTPVSSQQ HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEECCCCCHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]