| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160874242
Identifier: 160874242
GI number: 160874242
Start: 1324171
End: 1324638
Strand: Reverse
Name: 160874242
Synonym: Sbal195_1122
Alternate gene names: NA
Gene position: 1324638-1324171 (Counterclockwise)
Preceding gene: 160874248
Following gene: 160874238
Centisome position: 24.77
GC content: 44.66
Gene sequence:
>468_bases ATGTTAAAAGTGAACACGTTCAGCACTATGCTATGCCGATGGTTTTGGCTCGGCCTTTTCATTGGCCCCGTTTCTGCGGG CGTTATCTATACTTGGGTTGACGAAAATGGGGTGACGCATTACAGCCAACAAGCCCCGCAACAAGAAAACATCAAAGCAG AAAAACTCTACAGTGAAGATTTAGAACAGGCGAAAGTGGGTTTTATCGCACCGGTAAAGAAAGCGAAAGCCACTTCTGAA GCCAATGAATTAGAAAAGTCAGCGGCGCTGATTAAAGAGAAAGATGCTAAACAGGCTCAATCCATTTGTGAGAGTGCTAA ACACAATTTAGATATTCTCACGACGCACACTAAGCTTATCCGCCAAACTTCCGATTCGGGTGAATCTGTCGCTATGACAG AGGAAGATCGCCAAGCCTCGATTGCCCAGCAACAGGAAAGAATAAAACTCTTCTGTGATAAGAAGTAG
Upstream 100 bases:
>100_bases TTGCATACACTTATTACGCTAGTTCAGTGAAGAGAAGTTAGCTTTCAAGATAACATATTTTATTATCATGTCGATGAGAG ACCAGTTAGGGATGATTTCG
Downstream 100 bases:
>100_bases CCATTAATGAAGAGCGATTAAGCTGATGCAATAAAAAAGGAGCCGAGTTAAAAACTCGGCTCCTTTCGTTTTAGTACTTG AAGCGGGAGCGATACTGACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MLKVNTFSTMLCRWFWLGLFIGPVSAGVIYTWVDENGVTHYSQQAPQQENIKAEKLYSEDLEQAKVGFIAPVKKAKATSE ANELEKSAALIKEKDAKQAQSICESAKHNLDILTTHTKLIRQTSDSGESVAMTEEDRQASIAQQQERIKLFCDKK
Sequences:
>Translated_155_residues MLKVNTFSTMLCRWFWLGLFIGPVSAGVIYTWVDENGVTHYSQQAPQQENIKAEKLYSEDLEQAKVGFIAPVKKAKATSE ANELEKSAALIKEKDAKQAQSICESAKHNLDILTTHTKLIRQTSDSGESVAMTEEDRQASIAQQQERIKLFCDKK >Mature_155_residues MLKVNTFSTMLCRWFWLGLFIGPVSAGVIYTWVDENGVTHYSQQAPQQENIKAEKLYSEDLEQAKVGFIAPVKKAKATSE ANELEKSAALIKEKDAKQAQSICESAKHNLDILTTHTKLIRQTSDSGESVAMTEEDRQASIAQQQERIKLFCDKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17423; Mature: 17423
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKVNTFSTMLCRWFWLGLFIGPVSAGVIYTWVDENGVTHYSQQAPQQENIKAEKLYSED CEECCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHCCHHHCCHHHHHHHHH LEQAKVGFIAPVKKAKATSEANELEKSAALIKEKDAKQAQSICESAKHNLDILTTHTKLI HHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHH RQTSDSGESVAMTEEDRQASIAQQQERIKLFCDKK HHCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLKVNTFSTMLCRWFWLGLFIGPVSAGVIYTWVDENGVTHYSQQAPQQENIKAEKLYSED CEECCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHCCHHHCCHHHHHHHHH LEQAKVGFIAPVKKAKATSEANELEKSAALIKEKDAKQAQSICESAKHNLDILTTHTKLI HHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHH RQTSDSGESVAMTEEDRQASIAQQQERIKLFCDKK HHCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA