| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874147
Identifier: 160874147
GI number: 160874147
Start: 1222868
End: 1223914
Strand: Reverse
Name: 160874147
Synonym: Sbal195_1027
Alternate gene names: NA
Gene position: 1223914-1222868 (Counterclockwise)
Preceding gene: 160874148
Following gene: 160874146
Centisome position: 22.89
GC content: 48.9
Gene sequence:
>1047_bases ATGCCCACAAGGATGTTGTTCTCGGTTTTATCCTCAAGCCTGTTGCTTGCTTCTACGCTCCCATTACATTCCTTTGCGGC CAATGAACTGACGGGGATCTGGCAGGGACAATTAGGCAAAAGCAAAGTCAGAGTCTGCTTTAATCAATATGGAACAGGCA GTTATTACTATCAACGCTACTTAACGCCGATAAGGCTCGAGCAGCAAGATGAACTGTGGAAAGAAGAAGGCAACACGGGA AACTGGCAGTTTGATACTGTCACGCCACAAAAACTGAGCGGCCATTGGTTTAAAGATAGCGCGAGTAAATCGTTCCCCGT ACAACTTGAGCGAGCAATCAGCCCAGATGATGTAGAAGATTGCGGCGCCGATGCGTATAACCTGCCACTAGAAACCACGC CAAAACTCAGCCGAGGGAAATGGCAACCCTATGAAAATATTGAGTATCGCCCGCTGACGTTCGGTACAGAAGTAGGGATC GAATTTAAAGGCCCACAAACGGGGATCTTGGCAATTAATCAATGGCTTGAACATAAGCTCACCGATGAAGCCCAACTAGC ACAAACCTTTGACACTCGCCGCAGAATGCTGGCACAAATGGGCAGTTTTGTGACTGACGAAACCTTTGCCGAGCCGATTT TTATTAATCAGCATTGGCTCAGTGTGCGCCTATATCGCTGGGCCGCAGGTTATGGCGCTAATGGTATCAGCCAAGAATTT GTCAGTTTCTCCCTTACCGACGGCAAACCTTTCCACCCGTGGCAGTGGTTTCTCGCCGATACCAAACCGCAAAGCATGCT AGATAGTATGAGCCATCCTTTACCCCCAGCATTAAGGGAAAAATTGTTTGCAGGTAAAGGGTTAGATCCTGAATGCCCCT CATCAGACGGCTCGGGATATTATCAGCTCACCCTTGAGGCAAAGACCATCAAATTCTGGGAAACACCCCGCGGCGATGGA TGCGAACAAGAATTTGTCCTGAGTCCGCAGGAGGCGATGCCTTTCGCCACCCAATGGGGACAAACACAGCTTAAGCTGTT GGAATAG
Upstream 100 bases:
>100_bases TTTTATGCCCCAGATTCATTTTGATTTTTAGACCACAATCGGCTAGTGTCTCTCGCTTAAAATACAGCCCTAACCTATGA CCTTTTAAGAGAAAATATGT
Downstream 100 bases:
>100_bases TGTACTTAACTGAGAAAATACTAGAGGGAAAGAAAGTAGTCATGGTGATGATAGTAGCGCGACGGCAAACGATCTTTTCC TACACAGTAATGCATTTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MPTRMLFSVLSSSLLLASTLPLHSFAANELTGIWQGQLGKSKVRVCFNQYGTGSYYYQRYLTPIRLEQQDELWKEEGNTG NWQFDTVTPQKLSGHWFKDSASKSFPVQLERAISPDDVEDCGADAYNLPLETTPKLSRGKWQPYENIEYRPLTFGTEVGI EFKGPQTGILAINQWLEHKLTDEAQLAQTFDTRRRMLAQMGSFVTDETFAEPIFINQHWLSVRLYRWAAGYGANGISQEF VSFSLTDGKPFHPWQWFLADTKPQSMLDSMSHPLPPALREKLFAGKGLDPECPSSDGSGYYQLTLEAKTIKFWETPRGDG CEQEFVLSPQEAMPFATQWGQTQLKLLE
Sequences:
>Translated_348_residues MPTRMLFSVLSSSLLLASTLPLHSFAANELTGIWQGQLGKSKVRVCFNQYGTGSYYYQRYLTPIRLEQQDELWKEEGNTG NWQFDTVTPQKLSGHWFKDSASKSFPVQLERAISPDDVEDCGADAYNLPLETTPKLSRGKWQPYENIEYRPLTFGTEVGI EFKGPQTGILAINQWLEHKLTDEAQLAQTFDTRRRMLAQMGSFVTDETFAEPIFINQHWLSVRLYRWAAGYGANGISQEF VSFSLTDGKPFHPWQWFLADTKPQSMLDSMSHPLPPALREKLFAGKGLDPECPSSDGSGYYQLTLEAKTIKFWETPRGDG CEQEFVLSPQEAMPFATQWGQTQLKLLE >Mature_347_residues PTRMLFSVLSSSLLLASTLPLHSFAANELTGIWQGQLGKSKVRVCFNQYGTGSYYYQRYLTPIRLEQQDELWKEEGNTGN WQFDTVTPQKLSGHWFKDSASKSFPVQLERAISPDDVEDCGADAYNLPLETTPKLSRGKWQPYENIEYRPLTFGTEVGIE FKGPQTGILAINQWLEHKLTDEAQLAQTFDTRRRMLAQMGSFVTDETFAEPIFINQHWLSVRLYRWAAGYGANGISQEFV SFSLTDGKPFHPWQWFLADTKPQSMLDSMSHPLPPALREKLFAGKGLDPECPSSDGSGYYQLTLEAKTIKFWETPRGDGC EQEFVLSPQEAMPFATQWGQTQLKLLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39610; Mature: 39479
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTRMLFSVLSSSLLLASTLPLHSFAANELTGIWQGQLGKSKVRVCFNQYGTGSYYYQRY CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHCCCCCHHHHHHHHHHCCCCHHHHHHH LTPIRLEQQDELWKEEGNTGNWQFDTVTPQKLSGHWFKDSASKSFPVQLERAISPDDVED CCCCEECHHHHHHHHCCCCCCEEEECCCHHHHCCCEECCCCCCCCCEEEECCCCCCCHHH CGADAYNLPLETTPKLSRGKWQPYENIEYRPLTFGTEVGIEFKGPQTGILAINQWLEHKL CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEECEEECCCCCCHHHHHHHHHHHC TDEAQLAQTFDTRRRMLAQMGSFVTDETFAEPIFINQHWLSVRLYRWAAGYGANGISQEF CCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCEEEECCEEEEEEEEEECCCCCCCCCHHH VSFSLTDGKPFHPWQWFLADTKPQSMLDSMSHPLPPALREKLFAGKGLDPECPSSDGSGY HEEEECCCCCCCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCE YQLTLEAKTIKFWETPRGDGCEQEFVLSPQEAMPFATQWGQTQLKLLE EEEEEEEEEEEEECCCCCCCCCHHEEECCHHHCCCHHHCCCCEEEECC >Mature Secondary Structure PTRMLFSVLSSSLLLASTLPLHSFAANELTGIWQGQLGKSKVRVCFNQYGTGSYYYQRY CHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHCCCCCHHHHHHHHHHCCCCHHHHHHH LTPIRLEQQDELWKEEGNTGNWQFDTVTPQKLSGHWFKDSASKSFPVQLERAISPDDVED CCCCEECHHHHHHHHCCCCCCEEEECCCHHHHCCCEECCCCCCCCCEEEECCCCCCCHHH CGADAYNLPLETTPKLSRGKWQPYENIEYRPLTFGTEVGIEFKGPQTGILAINQWLEHKL CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEECEEECCCCCCHHHHHHHHHHHC TDEAQLAQTFDTRRRMLAQMGSFVTDETFAEPIFINQHWLSVRLYRWAAGYGANGISQEF CCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCEEEECCEEEEEEEEEECCCCCCCCCHHH VSFSLTDGKPFHPWQWFLADTKPQSMLDSMSHPLPPALREKLFAGKGLDPECPSSDGSGY HEEEECCCCCCCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCE YQLTLEAKTIKFWETPRGDGCEQEFVLSPQEAMPFATQWGQTQLKLLE EEEEEEEEEEEEECCCCCCCCCHHEEECCHHHCCCHHHCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA