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The map label for this gene is ccmH [H]

Identifier: 160873362

GI number: 160873362

Start: 271703

End: 272182

Strand: Direct

Name: ccmH [H]

Synonym: Sbal195_0236

Alternate gene names: 160873362

Gene position: 271703-272182 (Clockwise)

Preceding gene: 160873361

Following gene: 160873363

Centisome position: 5.08

GC content: 43.33

Gene sequence:

>480_bases
ATGAGAACGCTGACAAAAATCATTGGTGGTCTAGTGCTGTTATTCAGCATGACGACCGCCGTTATGGCAACACCGGTTGA
TACTTACGAATTCAAAACGCCTGAAAATCAAAAGCGCGGTTTGTCTTTGGCACATGAGCTACGTTGCCCACAGTGTCAAA
ATCAAAACTTGATCGACTCAAACTCACCAGTTGCGCGCGATCTGCGTCTTGAAGTCTTCAAGATGGTAGACGAAGGCAAA
GGAGATGATGAGATCATCGAGTTTATGACCAGCCGTTACGGTGAGTTCGTACTCTATAACCCAAAGATGGAAACCAAAAC
CTACATTCTTTGGTTAGGTCCTATTGGTTTGTTACTTATGGGCCTCGTGATTGGTTTTATCTTCATTCGTAAACAACGTA
TCAGCGGTAATGTGCCGAACGAAATTAGCGAAGAAGATCAGCGAGAGTTAGATACCTTGCTAAAGCGTAATACTAAATGA

Upstream 100 bases:

>100_bases
GCTTCCGTTATGCGGGTCCAATCGACCAACGCGTATGGAGTGAAACCCTTTACCCTATGATCCAACAATTACAAGCTGAA
GCGGCGAAGGATGGCGCATC

Downstream 100 bases:

>100_bases
AGCATAAAGTCATAGCGGCATTATTGTTGTCATCCCTCTTTTCGTTACTTGCTGGTGGGGTCGCGCATGCGTACCCTGGC
ATGCAGCAAGCGACGAAACC

Product: cytochrome C biogenesis protein

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CycL [H]

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MRTLTKIIGGLVLLFSMTTAVMATPVDTYEFKTPENQKRGLSLAHELRCPQCQNQNLIDSNSPVARDLRLEVFKMVDEGK
GDDEIIEFMTSRYGEFVLYNPKMETKTYILWLGPIGLLLMGLVIGFIFIRKQRISGNVPNEISEEDQRELDTLLKRNTK

Sequences:

>Translated_159_residues
MRTLTKIIGGLVLLFSMTTAVMATPVDTYEFKTPENQKRGLSLAHELRCPQCQNQNLIDSNSPVARDLRLEVFKMVDEGK
GDDEIIEFMTSRYGEFVLYNPKMETKTYILWLGPIGLLLMGLVIGFIFIRKQRISGNVPNEISEEDQRELDTLLKRNTK
>Mature_159_residues
MRTLTKIIGGLVLLFSMTTAVMATPVDTYEFKTPENQKRGLSLAHELRCPQCQNQNLIDSNSPVARDLRLEVFKMVDEGK
GDDEIIEFMTSRYGEFVLYNPKMETKTYILWLGPIGLLLMGLVIGFIFIRKQRISGNVPNEISEEDQRELDTLLKRNTK

Specific function: Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG3088

COG function: function code O; Uncharacterized protein involved in biosynthesis of c-type cytochromes

Gene ontology:

Cell location: Membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmH/CycL/Ccl2/NrfF family [H]

Homologues:

Organism=Escherichia coli, GI1790512, Length=90, Percent_Identity=52.2222222222222, Blast_Score=103, Evalue=6e-24,
Organism=Escherichia coli, GI1788522, Length=110, Percent_Identity=39.0909090909091, Blast_Score=97, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005616 [H]

Pfam domain/function: PF03918 CcmH [H]

EC number: NA

Molecular weight: Translated: 18202; Mature: 18202

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLTKIIGGLVLLFSMTTAVMATPVDTYEFKTPENQKRGLSLAHELRCPQCQNQNLIDS
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
NSPVARDLRLEVFKMVDEGKGDDEIIEFMTSRYGEFVLYNPKMETKTYILWLGPIGLLLM
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCCEEEEEEECHHHHHHH
GLVIGFIFIRKQRISGNVPNEISEEDQRELDTLLKRNTK
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRTLTKIIGGLVLLFSMTTAVMATPVDTYEFKTPENQKRGLSLAHELRCPQCQNQNLIDS
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
NSPVARDLRLEVFKMVDEGKGDDEIIEFMTSRYGEFVLYNPKMETKTYILWLGPIGLLLM
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCCEEEEEEECHHHHHHH
GLVIGFIFIRKQRISGNVPNEISEEDQRELDTLLKRNTK
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA