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The map label for this gene is secY [H]

Identifier: 160873346

GI number: 160873346

Start: 258383

End: 259723

Strand: Direct

Name: secY [H]

Synonym: Sbal195_0220

Alternate gene names: 160873346

Gene position: 258383-259723 (Clockwise)

Preceding gene: 160873345

Following gene: 160873347

Centisome position: 4.83

GC content: 44.82

Gene sequence:

>1341_bases
ATGGCAAAACCAGGACTTGATTTAAAAAGCGCGAAAGGTGGACTTTCAGAATTGAAAGCTCGCCTCCTGTTCGTGATTGG
TGCGATTATCGTCTTTAGAGCCGGTTCGTTTGTGCCAATTCCTGGTATTGACGCAGCTGTATTAGCAGAGCTGTTTGCTC
AGCAAAAAGGGACCATCCTGGGCATGTTTAACATGTTCTCGGGTGGCGCCCTTTCGCGTGCCTCTATCTTTGCATTAGGT
ATCATGCCGTATATTTCGGCATCGATTATTATGCAACTGTTGACTGTCGTACATCCTGCACTCGCTGAATTGAAAAAAGA
AGGCGAATCAGGTCGTAAGAAAATCAGTCAATATACCAGATGGGGTACCTTAGTGCTGGGTACATTCCAGTCGGTCGGTA
TTGCAACCGGGTTACCAAACTTAGTGCCAGGCCTTGTGGTCAACATTGGATTTGGGTTCTACTTTGTTGCGGTTGTGAGC
TTAGTGACGGGAACTATGTTCCTAATGTGGCTAGGTGAGCAGATTACCGAACGTGGTATAGGTAACGGTATCTCGATTTT
GATTTTCGCAGGTATTGTTGCTGGATTACCTTCCGCTATCGGCCAAACGGCTGAGCAGGCGCGTCAAGGTGACTTGAATG
TGTTAGTATTGTTGTTGCTCGCGGTAATTGTGTTTGCAGTGACTTATTTTGTAGTGTTTGTGGAACGTGGTCAGCGTCGT
ATCGTCGTTAACTATGCTAAGCGTCAGCAGGGCCGTAAGGTGTTCGCTGCGCAAAGTACCCATTTACCGCTTAAAATAAA
CATGGCAGGTGTTATTCCGCCAATTTTTGCGTCAAGCATCATTTTGTTCCCTGGAACACTGGCTCAGTGGTTCGGTCAAA
ATGAATCCATGTCATGGTTAAGTGATTTTTCACTGGCTGTGTCACCTGGACAACCGCTTTACTCATTATTATATGCAACA
GCGATTATCTTTTTCTGTTTCTTCTATACTGCGTTGGTATTTAACCCACGCGAAACAGCAGATAACTTGAAGAAGAGTGG
TGCATTCATCCCTGGGATCCGTCCTGGAGAACAGACTTCGCGTTACATTGATAAAGTTATGACCCGTTTGACATTGGCAG
GCGCGTTATACATAACCTTTATCTGCTTAATTCCGGAGTTCATGTTAATCGCGTGGAAAGTACAGTTCTATTTTGGCGGT
ACTTCACTACTAATTATGGTAGTCGTGATCATGGACTTCATGGCTCAGGTTCAGACGCATATGATGTCTCATCAGTATGA
GTCTGTGATGAAGAAAGCTAACCTAGTAAACAAAGCGAATTTAGATCGCTTTGGTCGCTAA

Upstream 100 bases:

>100_bases
ACCATTGAGCGCCCTGTGACTGTTAAAGGTCTGAAGGTAACCAAAGGTGCACGTGCAGCTATTGAAGCTGCCGGCGGTAA
GATCGAGGAATAATACGTCG

Downstream 100 bases:

>100_bases
GTAGCTTTACGGAGTGATGAAATGAAAGTTCGAGCTTCCGTGAAGAAGATCTGCCGTAACTGCAAGATCGTCAAGCGTAG
TGGCGTTGTACGCGTTATCT

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 445

Protein sequence:

>446_residues
MAKPGLDLKSAKGGLSELKARLLFVIGAIIVFRAGSFVPIPGIDAAVLAELFAQQKGTILGMFNMFSGGALSRASIFALG
IMPYISASIIMQLLTVVHPALAELKKEGESGRKKISQYTRWGTLVLGTFQSVGIATGLPNLVPGLVVNIGFGFYFVAVVS
LVTGTMFLMWLGEQITERGIGNGISILIFAGIVAGLPSAIGQTAEQARQGDLNVLVLLLLAVIVFAVTYFVVFVERGQRR
IVVNYAKRQQGRKVFAAQSTHLPLKINMAGVIPPIFASSIILFPGTLAQWFGQNESMSWLSDFSLAVSPGQPLYSLLYAT
AIIFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQTSRYIDKVMTRLTLAGALYITFICLIPEFMLIAWKVQFYFGG
TSLLIMVVVIMDFMAQVQTHMMSHQYESVMKKANLVNKANLDRFGR

Sequences:

>Translated_446_residues
MAKPGLDLKSAKGGLSELKARLLFVIGAIIVFRAGSFVPIPGIDAAVLAELFAQQKGTILGMFNMFSGGALSRASIFALG
IMPYISASIIMQLLTVVHPALAELKKEGESGRKKISQYTRWGTLVLGTFQSVGIATGLPNLVPGLVVNIGFGFYFVAVVS
LVTGTMFLMWLGEQITERGIGNGISILIFAGIVAGLPSAIGQTAEQARQGDLNVLVLLLLAVIVFAVTYFVVFVERGQRR
IVVNYAKRQQGRKVFAAQSTHLPLKINMAGVIPPIFASSIILFPGTLAQWFGQNESMSWLSDFSLAVSPGQPLYSLLYAT
AIIFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQTSRYIDKVMTRLTLAGALYITFICLIPEFMLIAWKVQFYFGG
TSLLIMVVVIMDFMAQVQTHMMSHQYESVMKKANLVNKANLDRFGR
>Mature_445_residues
AKPGLDLKSAKGGLSELKARLLFVIGAIIVFRAGSFVPIPGIDAAVLAELFAQQKGTILGMFNMFSGGALSRASIFALGI
MPYISASIIMQLLTVVHPALAELKKEGESGRKKISQYTRWGTLVLGTFQSVGIATGLPNLVPGLVVNIGFGFYFVAVVSL
VTGTMFLMWLGEQITERGIGNGISILIFAGIVAGLPSAIGQTAEQARQGDLNVLVLLLLAVIVFAVTYFVVFVERGQRRI
VVNYAKRQQGRKVFAAQSTHLPLKINMAGVIPPIFASSIILFPGTLAQWFGQNESMSWLSDFSLAVSPGQPLYSLLYATA
IIFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQTSRYIDKVMTRLTLAGALYITFICLIPEFMLIAWKVQFYFGGT
SLLIMVVVIMDFMAQVQTHMMSHQYESVMKKANLVNKANLDRFGR

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=438, Percent_Identity=82.8767123287671, Blast_Score=666, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 48642; Mature: 48511

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHCCHHHCCC
>Mature Secondary Structure 
AKPGLDLKSAKGGLSELKARLLFVIGAIIVFRAGSFVPIPGIDAAVLAELFAQQKGTIL
CCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEE
GMFNMFSGGALSRASIFALGIMPYISASIIMQLLTVVHPALAELKKEGESGRKKISQYTR
EEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
WGTLVLGTFQSVGIATGLPNLVPGLVVNIGFGFYFVAVVSLVTGTMFLMWLGEQITERGI
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GNGISILIFAGIVAGLPSAIGQTAEQARQGDLNVLVLLLLAVIVFAVTYFVVFVERGQRR
CCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
IVVNYAKRQQGRKVFAAQSTHLPLKINMAGVIPPIFASSIILFPGTLAQWFGQNESMSWL
EEEEHHHHHCCCEEEEECCCCCCEEEECHHCCCHHHHHHHHHCCCHHHHHCCCCCCHHHH
SDFSLAVSPGQPLYSLLYATAIIFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQTS
HHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHH
RYIDKVMTRLTLAGALYITFICLIPEFMLIAWKVQFYFGGTSLLIMVVVIMDFMAQVQTH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHH
MMSHQYESVMKKANLVNKANLDRFGR
HHHHHHHHHHHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9322765; 10952301 [H]