The gene/protein map for NC_009997 is currently unavailable.
Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

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The map label for this gene is tuf1

Identifier: 160873324

GI number: 160873324

Start: 247698

End: 248882

Strand: Direct

Name: tuf1

Synonym: Sbal195_0198

Alternate gene names: 160873324

Gene position: 247698-248882 (Clockwise)

Preceding gene: 160873323

Following gene: 160873325

Centisome position: 4.63

GC content: 47.0

Gene sequence:

>1185_bases
GTGGCAAAAGCTAAATTTGAACGTATTAAGCCTCACGTAAACGTGGGCACCATTGGTCACGTTGACCATGGTAAAACCAC
ACTGACTGCAGCTATCTCTCACGTACTGGCTAAGACCTACGGTGGCGAAGCTAAAGACTTCTCTCAAATCGATAACGCTC
CAGAAGAGCGTGAGCGCGGTATTACAATCAATACCTCTCACATCGAATATGACACGCCTTCACGTCACTACGCACACGTA
GACTGCCCAGGCCATGCTGACTATGTTAAAAACATGATCACTGGTGCTGCACAGATGGACGGCGCGATTTTAGTAGTAGC
GTCAACAGACGGTCCAATGCCACAGACTCGTGAGCACATCCTGCTTTCTCGTCAGGTTGGCGTACCGTACATCATCGTGT
TCATGAACAAATGTGACATGGTAGATGACGAAGAATTACTGGAATTGGTAGAAATGGAAGTTCGTGAACTTCTGTCAGAA
TACGATTTCCCAGGTGATGACTTACCAGTAATCCAAGGTTCAGCTCTGAAGGCGCTAGAAGGCCAACCAGAGTGGGAAGC
TAAGATTATCGAACTGGCTAACGCACTGGATTCTTACATTCCAGAACCACAACGTGACATCGATAAGCCGTTCCTACTGC
CAATCGAAGACGTATTCTCAATCTCTGGCCGTGGTACTGTAGTAACTGGCCGTGTTGAGCGTGGTATTGTTAAAGTGGGT
GACGAAGTTGAAATCGTTGGTGTTCGCACTACGACTAAAACAACGTGTACTGGCGTAGAAATGTTCCGTAAGCTGCTTGA
CGAAGGTCGTGCAGGCGAGAACTGTGGTGTGTTATTACGTGGTACTAAGCGTGATGACGTAGAACGTGGTCAAGTATTGG
CTAAACCAGGTTCAATCAACCCACACACTACTTTTGAATCAGAAGTTTATGTTCTGTCAAAAGAAGAAGGCGGACGTCAC
ACTCCATTCTTCAAAGGCTACCGTCCACAGTTCTACTTCCGTACAACTGACGTAACCGGTACTATCGAACTGCCAGAAGG
CGTAGAGATGGTAATGCCTGGCGACAACATCAAAATGGTAGTTACTCTGATTTGCCCAATCGCGATGGACGAAGGTTTAC
GCTTCGCAATCCGTGAAGGTGGTCGTACAGTAGGTGCTGGTGTAGTAGCTAAAATCATTGCTTAA

Upstream 100 bases:

>100_bases
AAAAGCGATTATTGAATCTCGTAGCTAATATCCAGTTACGACATAAATGTTATTATGGTCCAGCACTGACTGGACTATTC
TGAAAAGAAAGGAATATATC

Downstream 100 bases:

>100_bases
TAGCGATAGAGATTAGTTTGAAAAGGAAGCTTCGGCTTCCTTTTTTGTTTTAAGGGCTGGTTTTATCCACAAATTTGTGT
AAAATGCTCGCCACTCTGAA

Product: elongation factor Tu

Products: GDP; phosphate

Alternate protein names: EF-Tu 1

Number of amino acids: Translated: 394; Mature: 393

Protein sequence:

>394_residues
MAKAKFERIKPHVNVGTIGHVDHGKTTLTAAISHVLAKTYGGEAKDFSQIDNAPEERERGITINTSHIEYDTPSRHYAHV
DCPGHADYVKNMITGAAQMDGAILVVASTDGPMPQTREHILLSRQVGVPYIIVFMNKCDMVDDEELLELVEMEVRELLSE
YDFPGDDLPVIQGSALKALEGQPEWEAKIIELANALDSYIPEPQRDIDKPFLLPIEDVFSISGRGTVVTGRVERGIVKVG
DEVEIVGVRTTTKTTCTGVEMFRKLLDEGRAGENCGVLLRGTKRDDVERGQVLAKPGSINPHTTFESEVYVLSKEEGGRH
TPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMVVTLICPIAMDEGLRFAIREGGRTVGAGVVAKIIA

Sequences:

>Translated_394_residues
MAKAKFERIKPHVNVGTIGHVDHGKTTLTAAISHVLAKTYGGEAKDFSQIDNAPEERERGITINTSHIEYDTPSRHYAHV
DCPGHADYVKNMITGAAQMDGAILVVASTDGPMPQTREHILLSRQVGVPYIIVFMNKCDMVDDEELLELVEMEVRELLSE
YDFPGDDLPVIQGSALKALEGQPEWEAKIIELANALDSYIPEPQRDIDKPFLLPIEDVFSISGRGTVVTGRVERGIVKVG
DEVEIVGVRTTTKTTCTGVEMFRKLLDEGRAGENCGVLLRGTKRDDVERGQVLAKPGSINPHTTFESEVYVLSKEEGGRH
TPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMVVTLICPIAMDEGLRFAIREGGRTVGAGVVAKIIA
>Mature_393_residues
AKAKFERIKPHVNVGTIGHVDHGKTTLTAAISHVLAKTYGGEAKDFSQIDNAPEERERGITINTSHIEYDTPSRHYAHVD
CPGHADYVKNMITGAAQMDGAILVVASTDGPMPQTREHILLSRQVGVPYIIVFMNKCDMVDDEELLELVEMEVRELLSEY
DFPGDDLPVIQGSALKALEGQPEWEAKIIELANALDSYIPEPQRDIDKPFLLPIEDVFSISGRGTVVTGRVERGIVKVGD
EVEIVGVRTTTKTTCTGVEMFRKLLDEGRAGENCGVLLRGTKRDDVERGQVLAKPGSINPHTTFESEVYVLSKEEGGRHT
PFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMVVTLICPIAMDEGLRFAIREGGRTVGAGVVAKIIA

Specific function: This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis

COG id: COG0050

COG function: function code J; GTPases - translation elongation factors

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily

Homologues:

Organism=Homo sapiens, GI34147630, Length=395, Percent_Identity=57.2151898734177, Blast_Score=475, Evalue=1e-134,
Organism=Homo sapiens, GI4503475, Length=354, Percent_Identity=33.0508474576271, Blast_Score=159, Evalue=5e-39,
Organism=Homo sapiens, GI223555963, Length=443, Percent_Identity=29.1196388261851, Blast_Score=156, Evalue=3e-38,
Organism=Homo sapiens, GI5729864, Length=443, Percent_Identity=29.1196388261851, Blast_Score=156, Evalue=4e-38,
Organism=Homo sapiens, GI4503471, Length=447, Percent_Identity=29.3064876957494, Blast_Score=155, Evalue=8e-38,
Organism=Homo sapiens, GI54607086, Length=345, Percent_Identity=29.2753623188406, Blast_Score=126, Evalue=4e-29,
Organism=Homo sapiens, GI194018522, Length=343, Percent_Identity=29.4460641399417, Blast_Score=119, Evalue=3e-27,
Organism=Homo sapiens, GI194097354, Length=343, Percent_Identity=29.4460641399417, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI194018520, Length=343, Percent_Identity=29.4460641399417, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI46094014, Length=351, Percent_Identity=29.0598290598291, Blast_Score=116, Evalue=4e-26,
Organism=Homo sapiens, GI4503507, Length=357, Percent_Identity=27.7310924369748, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI82546879, Length=428, Percent_Identity=24.2990654205607, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI53729339, Length=231, Percent_Identity=30.3030303030303, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI53729337, Length=231, Percent_Identity=30.3030303030303, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI157426893, Length=263, Percent_Identity=25.0950570342205, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI1790412, Length=394, Percent_Identity=87.3096446700508, Blast_Score=689, Evalue=0.0,
Organism=Escherichia coli, GI1789737, Length=394, Percent_Identity=87.3096446700508, Blast_Score=689, Evalue=0.0,
Organism=Escherichia coli, GI2367247, Length=377, Percent_Identity=29.4429708222812, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI48994988, Length=252, Percent_Identity=30.5555555555556, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI1789108, Length=311, Percent_Identity=29.5819935691318, Blast_Score=94, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17556456, Length=399, Percent_Identity=51.8796992481203, Blast_Score=393, Evalue=1e-110,
Organism=Caenorhabditis elegans, GI25141371, Length=386, Percent_Identity=46.6321243523316, Blast_Score=347, Evalue=6e-96,
Organism=Caenorhabditis elegans, GI17552884, Length=447, Percent_Identity=29.9776286353468, Blast_Score=157, Evalue=7e-39,
Organism=Caenorhabditis elegans, GI17569207, Length=447, Percent_Identity=29.9776286353468, Blast_Score=157, Evalue=7e-39,
Organism=Caenorhabditis elegans, GI32566303, Length=433, Percent_Identity=28.175519630485, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI115532067, Length=435, Percent_Identity=28.0459770114943, Blast_Score=129, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI115532065, Length=432, Percent_Identity=28.0092592592593, Blast_Score=128, Evalue=5e-30,
Organism=Caenorhabditis elegans, GI32566629, Length=341, Percent_Identity=28.1524926686217, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17506081, Length=237, Percent_Identity=32.4894514767932, Blast_Score=119, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI32566301, Length=152, Percent_Identity=36.1842105263158, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17509919, Length=279, Percent_Identity=27.9569892473118, Blast_Score=88, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI17557151, Length=231, Percent_Identity=28.5714285714286, Blast_Score=78, Evalue=7e-15,
Organism=Saccharomyces cerevisiae, GI6324761, Length=397, Percent_Identity=64.2317380352645, Blast_Score=523, Evalue=1e-149,
Organism=Saccharomyces cerevisiae, GI6325337, Length=444, Percent_Identity=30.8558558558559, Blast_Score=156, Evalue=6e-39,
Organism=Saccharomyces cerevisiae, GI6319594, Length=444, Percent_Identity=30.8558558558559, Blast_Score=156, Evalue=6e-39,
Organism=Saccharomyces cerevisiae, GI6322937, Length=457, Percent_Identity=23.6323851203501, Blast_Score=95, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6320377, Length=339, Percent_Identity=28.6135693215339, Blast_Score=91, Evalue=5e-19,
Organism=Saccharomyces cerevisiae, GI6320863, Length=280, Percent_Identity=27.8571428571429, Blast_Score=87, Evalue=6e-18,
Organism=Saccharomyces cerevisiae, GI6323320, Length=282, Percent_Identity=28.7234042553192, Blast_Score=71, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6323098, Length=135, Percent_Identity=30.3703703703704, Blast_Score=63, Evalue=8e-11,
Organism=Drosophila melanogaster, GI281363316, Length=393, Percent_Identity=57.2519083969466, Blast_Score=474, Evalue=1e-134,
Organism=Drosophila melanogaster, GI17864358, Length=393, Percent_Identity=57.2519083969466, Blast_Score=474, Evalue=1e-134,
Organism=Drosophila melanogaster, GI19921738, Length=383, Percent_Identity=51.9582245430809, Blast_Score=392, Evalue=1e-109,
Organism=Drosophila melanogaster, GI45553807, Length=447, Percent_Identity=29.082774049217, Blast_Score=161, Evalue=7e-40,
Organism=Drosophila melanogaster, GI45553816, Length=447, Percent_Identity=29.082774049217, Blast_Score=161, Evalue=7e-40,
Organism=Drosophila melanogaster, GI24651721, Length=447, Percent_Identity=29.082774049217, Blast_Score=161, Evalue=7e-40,
Organism=Drosophila melanogaster, GI17864154, Length=447, Percent_Identity=29.082774049217, Blast_Score=161, Evalue=7e-40,
Organism=Drosophila melanogaster, GI24652838, Length=449, Percent_Identity=28.9532293986637, Blast_Score=152, Evalue=4e-37,
Organism=Drosophila melanogaster, GI17137572, Length=449, Percent_Identity=28.9532293986637, Blast_Score=152, Evalue=4e-37,
Organism=Drosophila melanogaster, GI19922690, Length=302, Percent_Identity=29.4701986754967, Blast_Score=125, Evalue=5e-29,
Organism=Drosophila melanogaster, GI17137380, Length=339, Percent_Identity=31.2684365781711, Blast_Score=122, Evalue=6e-28,
Organism=Drosophila melanogaster, GI45550900, Length=436, Percent_Identity=27.5229357798165, Blast_Score=121, Evalue=7e-28,
Organism=Drosophila melanogaster, GI24647048, Length=415, Percent_Identity=26.0240963855422, Blast_Score=98, Evalue=9e-21,
Organism=Drosophila melanogaster, GI24647046, Length=415, Percent_Identity=26.0240963855422, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI28572034, Length=163, Percent_Identity=36.8098159509202, Blast_Score=69, Evalue=6e-12,

Paralogues:

None

Copy number: 20568 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): EFTU1_SHEB5 (A3DA74)

Other databases:

- EMBL:   CP000563
- RefSeq:   YP_001041768.2
- RefSeq:   YP_001052506.1
- ProteinModelPortal:   A3DA74
- SMR:   A3DA74
- STRING:   A3DA74
- GeneID:   4841343
- GeneID:   4841998
- GenomeReviews:   CP000563_GR
- KEGG:   sbl:Sbal_4172
- eggNOG:   COG0050
- HOGENOM:   HBG307581
- PhylomeDB:   A3DA74
- GO:   GO:0005737
- HAMAP:   MF_00118_B
- InterPro:   IPR000795
- InterPro:   IPR005225
- InterPro:   IPR009001
- InterPro:   IPR004161
- InterPro:   IPR004541
- InterPro:   IPR004160
- InterPro:   IPR009000
- PANTHER:   PTHR23115:SF31
- PRINTS:   PR00315
- TIGRFAMs:   TIGR00485
- TIGRFAMs:   TIGR00231

Pfam domain/function: PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2; PF03143 GTP_EFTU_D3; SSF50465 Elong_init_C; SSF50447 Translat_factor

EC number: 3.6.5.3

Molecular weight: Translated: 43336; Mature: 43205

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS00301 EFACTOR_GTP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MAKAKFERIKPHVNVGTIGHVDHGKTTLTAAISHVLAKTYGGEAKDFSQIDNAPEERERG
CCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHCC
ITINTSHIEYDTPSRHYAHVDCPGHADYVKNMITGAAQMDGAILVVASTDGPMPQTREHI
EEEEECEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHE
LLSRQVGVPYIIVFMNKCDMVDDEELLELVEMEVRELLSEYDFPGDDLPVIQGSALKALE
EEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHC
GQPEWEAKIIELANALDSYIPEPQRDIDKPFLLPIEDVFSISGRGTVVTGRVERGIVKVG
CCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEHHHHHCCCCCCEEEECHHCCCEEEEC
DEVEIVGVRTTTKTTCTGVEMFRKLLDEGRAGENCGVLLRGTKRDDVERGQVLAKPGSIN
CEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCC
PHTTFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMV
CCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEECCEEEEECCCCCEEEECCCCCEEE
VTLICPIAMDEGLRFAIREGGRTVGAGVVAKIIA
EEEHHHHHHCCCCEEEECCCCCEEHHHHHHHHCC
>Mature Secondary Structure 
AKAKFERIKPHVNVGTIGHVDHGKTTLTAAISHVLAKTYGGEAKDFSQIDNAPEERERG
CCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHCC
ITINTSHIEYDTPSRHYAHVDCPGHADYVKNMITGAAQMDGAILVVASTDGPMPQTREHI
EEEEECEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHE
LLSRQVGVPYIIVFMNKCDMVDDEELLELVEMEVRELLSEYDFPGDDLPVIQGSALKALE
EEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHC
GQPEWEAKIIELANALDSYIPEPQRDIDKPFLLPIEDVFSISGRGTVVTGRVERGIVKVG
CCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEHHHHHCCCCCCEEEECHHCCCEEEEC
DEVEIVGVRTTTKTTCTGVEMFRKLLDEGRAGENCGVLLRGTKRDDVERGQVLAKPGSIN
CEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCC
PHTTFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMV
CCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEECCEEEEECCCCCEEEECCCCCEEE
VTLICPIAMDEGLRFAIREGGRTVGAGVVAKIIA
EEEHHHHHHCCCCEEEECCCCCEEHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP; H2O

Specific reaction: GTP + H2O = GDP + phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA