Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is fusA1 [H]
Identifier: 160873323
GI number: 160873323
Start: 245529
End: 247625
Strand: Direct
Name: fusA1 [H]
Synonym: Sbal195_0197
Alternate gene names: 160873323
Gene position: 245529-247625 (Clockwise)
Preceding gene: 160873322
Following gene: 160873324
Centisome position: 4.59
GC content: 46.21
Gene sequence:
>2097_bases GTGGCTCGTACAACCCCAATTGAGCGTTATCGTAATATCGGTATTTGTGCTCATGTTGACGCAGGTAAAACCACCACAAC AGAACGTGTTCTGTTCTATACCGGTTTGTCTCATAAAATCGGTGAGGTGCATGACGGCGCCGCTACCACAGACTGGATGG TTCAAGAGCAAGAGCGTGGTATCACTATCACCTCGGCTGCGGTAACCACATTCTGGCGTGGTATGGATGCTCAATTCACT GAACACCGCATCAATATCATCGATACCCCTGGTCACGTTGACTTTACTATTGAAGTTGAACGGTCTCTGCGCGTCCTCGA CGGCGCTGTTGTCGTTTTCTGTGGTTCATCTGGTGTTGAACCTCAGTCAGAAACAGTGTGGCGTCAAGCTGATAAATACC GCGTTCCACGCTTAGTATTTATCAACAAGATGGACCGTGCAGGTGCAGACTTTGAACGTGTAGTGAAGCAAATTAGAACT CGTCTTGGAGCCACTTGTGTGCCTATTCAATTGAATATTGGTGCAGAAGAAAACTTCAAAGGCGTGATCGACTTAATCAA GATGAAAGCAATTAACTGGAATGAATCAGACCAGGGTATGACTTTCACTTATGAGGAGATCCCTGCAGAGTTAGCGGCTA AAGCGGCTGAAATGCATGAGTATCTAGTTGAAGTAGCCGCCGAATCCTCGGATGAACTGATGGATAAGTACCTTGAAGAA GGCACGCTATCAGAAGACGAGATTAAAAAGGCACTACGTCAGCGTACTATAAATAATGAAATCGTTTTAGCGACTTGTGG TTCTGCATTTAAGAACAAAGGCGTTCAAGCGGTACTTGATGCGGTTATTGAATTCTTGCCAGCGCCAATTGATGTGCCTC CAATTAAGGGCATCGATGAGAACGACCAAGAAGTAGAGCGCCCATCAGATGACAATGCGCCTTTTGCTGCATTGGCATTT AAGATTGCTACAGATCCATTCGTAGGAACTTTGACCTTTATTCGCGTGTACTCAGGCGTACTCGAATCAGGTTCGGGCGT TTACAACTCTGTGAAACAGAAGCGTGAACGCGTAGGTCGTATGGTGCAAATGCATGCAAACGATCGTACTGAACTGAAAG AAGTCCGTGCTGGTGATATCGCAGCGGCGATTGGTCTAAAAGAAGTGACTACGGGTGATACGCTTTGTGATAACGATCAT AGAGTGATCTTGGAACGTATGGAGTTCCCAGAGCCAGTAATTACCATTGCCGTTGAGCCTAAGTCAAAAGCCGACCAGGA CAAAATGGGTATCGCGTTGCAAAAGCTTGCAGCGGAAGATCCATCATTCCGAGTTGAAACTGACGAAGAATCATCACAAA CTCTGATTTCGGGTATGGGTGAGTTACACTTAGACATCATCGTTGACCGTATGCGTCGCGAATTCGGTGTTGAATGTAAC GTAGGTAAGCCACAAGTGGCCTACCGCGAAACTATCCGAGCATCAGTCGAAGCTGAAGGTAAATTTGTACGCCAATCAGG TGGTCGTGGACAATTCGGTCACGTTTGGTTAAAACTAGAGCCTAATGAAGAAGGCGCTGGTTACGAATTTGTCAATGCAG TTGTGGGAGGTGTGATTCCTCGTGAATTCATTCCTGCGGTTGATAAAGGTATCCAAGAACAGATGAAGAATGGCGTTCTC GCTGGCTTCCCTGTGTTGGACGTGAAGGTCACTCTGTTCGACGGTTCATATCATGATGTGGACTCGAATGAGATGGCGTT CAAAATTGCAGGTTCTATGGGCTTCAAAAAGGGTGCGCTTGAAGCGAATCCGGCGTTGCTCGAACCTTGCATGAAAGTAG AAGTAACTACCCCTGAAAATTATATGGGTGACGTCGTTGGTGATTTAAACCGTCGTCGTGGCTTGATTGAAGGGATGGAT GATGGCTTCGGTGGCATCAAAATAGTCCATGCTGTAGTGCCTCTTTCTGAAATGTTTGGTTATGCAACTGATTTGCGCTC TGCTACACAGGGTCGCGCTTCATACTCTATGGAGTTTTTGAAGTACTCTGATGCACCGCAAAACATTGCAAAAGCGATTA TTGAATCTCGTAGCTAA
Upstream 100 bases:
>100_bases CTTTGCTCATTACCGTTGGTAATATGATGGTGTGGGCTTAGGCCCACACCATAGTTGTTGATATTGCCAAGGCTTAGGTC TTGGTGGAGAGGGTATAATC
Downstream 100 bases:
>100_bases TATCCAGTTACGACATAAATGTTATTATGGTCCAGCACTGACTGGACTATTCTGAAAAGAAAGGAATATATCGTGGCAAA AGCTAAATTTGAACGTATTA
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G 1 [H]
Number of amino acids: Translated: 698; Mature: 697
Protein sequence:
>698_residues MARTTPIERYRNIGICAHVDAGKTTTTERVLFYTGLSHKIGEVHDGAATTDWMVQEQERGITITSAAVTTFWRGMDAQFT EHRINIIDTPGHVDFTIEVERSLRVLDGAVVVFCGSSGVEPQSETVWRQADKYRVPRLVFINKMDRAGADFERVVKQIRT RLGATCVPIQLNIGAEENFKGVIDLIKMKAINWNESDQGMTFTYEEIPAELAAKAAEMHEYLVEVAAESSDELMDKYLEE GTLSEDEIKKALRQRTINNEIVLATCGSAFKNKGVQAVLDAVIEFLPAPIDVPPIKGIDENDQEVERPSDDNAPFAALAF KIATDPFVGTLTFIRVYSGVLESGSGVYNSVKQKRERVGRMVQMHANDRTELKEVRAGDIAAAIGLKEVTTGDTLCDNDH RVILERMEFPEPVITIAVEPKSKADQDKMGIALQKLAAEDPSFRVETDEESSQTLISGMGELHLDIIVDRMRREFGVECN VGKPQVAYRETIRASVEAEGKFVRQSGGRGQFGHVWLKLEPNEEGAGYEFVNAVVGGVIPREFIPAVDKGIQEQMKNGVL AGFPVLDVKVTLFDGSYHDVDSNEMAFKIAGSMGFKKGALEANPALLEPCMKVEVTTPENYMGDVVGDLNRRRGLIEGMD DGFGGIKIVHAVVPLSEMFGYATDLRSATQGRASYSMEFLKYSDAPQNIAKAIIESRS
Sequences:
>Translated_698_residues MARTTPIERYRNIGICAHVDAGKTTTTERVLFYTGLSHKIGEVHDGAATTDWMVQEQERGITITSAAVTTFWRGMDAQFT EHRINIIDTPGHVDFTIEVERSLRVLDGAVVVFCGSSGVEPQSETVWRQADKYRVPRLVFINKMDRAGADFERVVKQIRT RLGATCVPIQLNIGAEENFKGVIDLIKMKAINWNESDQGMTFTYEEIPAELAAKAAEMHEYLVEVAAESSDELMDKYLEE GTLSEDEIKKALRQRTINNEIVLATCGSAFKNKGVQAVLDAVIEFLPAPIDVPPIKGIDENDQEVERPSDDNAPFAALAF KIATDPFVGTLTFIRVYSGVLESGSGVYNSVKQKRERVGRMVQMHANDRTELKEVRAGDIAAAIGLKEVTTGDTLCDNDH RVILERMEFPEPVITIAVEPKSKADQDKMGIALQKLAAEDPSFRVETDEESSQTLISGMGELHLDIIVDRMRREFGVECN VGKPQVAYRETIRASVEAEGKFVRQSGGRGQFGHVWLKLEPNEEGAGYEFVNAVVGGVIPREFIPAVDKGIQEQMKNGVL AGFPVLDVKVTLFDGSYHDVDSNEMAFKIAGSMGFKKGALEANPALLEPCMKVEVTTPENYMGDVVGDLNRRRGLIEGMD DGFGGIKIVHAVVPLSEMFGYATDLRSATQGRASYSMEFLKYSDAPQNIAKAIIESRS >Mature_697_residues ARTTPIERYRNIGICAHVDAGKTTTTERVLFYTGLSHKIGEVHDGAATTDWMVQEQERGITITSAAVTTFWRGMDAQFTE HRINIIDTPGHVDFTIEVERSLRVLDGAVVVFCGSSGVEPQSETVWRQADKYRVPRLVFINKMDRAGADFERVVKQIRTR LGATCVPIQLNIGAEENFKGVIDLIKMKAINWNESDQGMTFTYEEIPAELAAKAAEMHEYLVEVAAESSDELMDKYLEEG TLSEDEIKKALRQRTINNEIVLATCGSAFKNKGVQAVLDAVIEFLPAPIDVPPIKGIDENDQEVERPSDDNAPFAALAFK IATDPFVGTLTFIRVYSGVLESGSGVYNSVKQKRERVGRMVQMHANDRTELKEVRAGDIAAAIGLKEVTTGDTLCDNDHR VILERMEFPEPVITIAVEPKSKADQDKMGIALQKLAAEDPSFRVETDEESSQTLISGMGELHLDIIVDRMRREFGVECNV GKPQVAYRETIRASVEAEGKFVRQSGGRGQFGHVWLKLEPNEEGAGYEFVNAVVGGVIPREFIPAVDKGIQEQMKNGVLA GFPVLDVKVTLFDGSYHDVDSNEMAFKIAGSMGFKKGALEANPALLEPCMKVEVTTPENYMGDVVGDLNRRRGLIEGMDD GFGGIKIVHAVVPLSEMFGYATDLRSATQGRASYSMEFLKYSDAPQNIAKAIIESRS
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=690, Percent_Identity=44.0579710144928, Blast_Score=558, Evalue=1e-159, Organism=Homo sapiens, GI19923640, Length=732, Percent_Identity=38.6612021857923, Blast_Score=469, Evalue=1e-132, Organism=Homo sapiens, GI25306287, Length=732, Percent_Identity=36.7486338797814, Blast_Score=422, Evalue=1e-118, Organism=Homo sapiens, GI25306283, Length=455, Percent_Identity=41.3186813186813, Blast_Score=322, Evalue=1e-87, Organism=Homo sapiens, GI4503483, Length=148, Percent_Identity=43.9189189189189, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI157426893, Length=202, Percent_Identity=31.6831683168317, Blast_Score=101, Evalue=2e-21, Organism=Homo sapiens, GI94966754, Length=138, Percent_Identity=38.4057971014493, Blast_Score=90, Evalue=7e-18, Organism=Homo sapiens, GI217272892, Length=140, Percent_Identity=35.7142857142857, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI217272894, Length=140, Percent_Identity=35.7142857142857, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI310132016, Length=120, Percent_Identity=36.6666666666667, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI310110807, Length=120, Percent_Identity=36.6666666666667, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI310123363, Length=120, Percent_Identity=36.6666666666667, Blast_Score=74, Evalue=3e-13, Organism=Escherichia coli, GI1789738, Length=703, Percent_Identity=70.9815078236131, Blast_Score=1034, Evalue=0.0, Organism=Escherichia coli, GI1790835, Length=487, Percent_Identity=27.5154004106776, Blast_Score=147, Evalue=2e-36, Organism=Escherichia coli, GI48994988, Length=152, Percent_Identity=38.8157894736842, Blast_Score=101, Evalue=2e-22, Organism=Escherichia coli, GI1788922, Length=158, Percent_Identity=37.9746835443038, Blast_Score=97, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17533571, Length=690, Percent_Identity=40.1449275362319, Blast_Score=491, Evalue=1e-139, Organism=Caenorhabditis elegans, GI17556745, Length=729, Percent_Identity=29.0809327846365, Blast_Score=312, Evalue=3e-85, Organism=Caenorhabditis elegans, GI17506493, Length=182, Percent_Identity=39.010989010989, Blast_Score=102, Evalue=6e-22, Organism=Caenorhabditis elegans, GI17557151, Length=161, Percent_Identity=36.0248447204969, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17552882, Length=136, Percent_Identity=35.2941176470588, Blast_Score=74, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71988819, Length=147, Percent_Identity=32.6530612244898, Blast_Score=72, Evalue=7e-13, Organism=Caenorhabditis elegans, GI71988811, Length=147, Percent_Identity=32.6530612244898, Blast_Score=72, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6323098, Length=691, Percent_Identity=41.6787264833575, Blast_Score=531, Evalue=1e-151, Organism=Saccharomyces cerevisiae, GI6322359, Length=790, Percent_Identity=31.3924050632911, Blast_Score=361, Evalue=1e-100, Organism=Saccharomyces cerevisiae, GI6324707, Length=810, Percent_Identity=26.9135802469136, Blast_Score=181, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6320593, Length=810, Percent_Identity=26.9135802469136, Blast_Score=181, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6323320, Length=153, Percent_Identity=34.640522875817, Blast_Score=89, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6324166, Length=174, Percent_Identity=34.4827586206897, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24582462, Length=703, Percent_Identity=42.5320056899004, Blast_Score=560, Evalue=1e-159, Organism=Drosophila melanogaster, GI221458488, Length=715, Percent_Identity=32.5874125874126, Blast_Score=357, Evalue=1e-98, Organism=Drosophila melanogaster, GI24585711, Length=801, Percent_Identity=27.0911360799001, Blast_Score=176, Evalue=4e-44, Organism=Drosophila melanogaster, GI24585713, Length=801, Percent_Identity=27.0911360799001, Blast_Score=176, Evalue=4e-44, Organism=Drosophila melanogaster, GI24585709, Length=801, Percent_Identity=27.0911360799001, Blast_Score=176, Evalue=4e-44, Organism=Drosophila melanogaster, GI78706572, Length=202, Percent_Identity=31.1881188118812, Blast_Score=98, Evalue=2e-20, Organism=Drosophila melanogaster, GI28574573, Length=142, Percent_Identity=37.3239436619718, Blast_Score=86, Evalue=1e-16, Organism=Drosophila melanogaster, GI21357743, Length=136, Percent_Identity=33.0882352941176, Blast_Score=72, Evalue=2e-12,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 77035; Mature: 76904
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTTPIERYRNIGICAHVDAGKTTTTERVLFYTGLSHKIGEVHDGAATTDWMVQEQERG CCCCCCHHHHCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCC ITITSAAVTTFWRGMDAQFTEHRINIIDTPGHVDFTIEVERSLRVLDGAVVVFCGSSGVE EEEEHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEECCCHHHCCCEEEEEECCCCCC PQSETVWRQADKYRVPRLVFINKMDRAGADFERVVKQIRTRLGATCVPIQLNIGAEENFK CCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCHH GVIDLIKMKAINWNESDQGMTFTYEEIPAELAAKAAEMHEYLVEVAAESSDELMDKYLEE HHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC GTLSEDEIKKALRQRTINNEIVLATCGSAFKNKGVQAVLDAVIEFLPAPIDVPPIKGIDE CCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCC NDQEVERPSDDNAPFAALAFKIATDPFVGTLTFIRVYSGVLESGSGVYNSVKQKRERVGR CCHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH MVQMHANDRTELKEVRAGDIAAAIGLKEVTTGDTLCDNDHRVILERMEFPEPVITIAVEP EEEECCCCHHHHHHHHCCCHHHHHCCHHCCCCCCEECCCCHHHHHHHCCCCCEEEEEECC KSKADQDKMGIALQKLAAEDPSFRVETDEESSQTLISGMGELHLDIIVDRMRREFGVECN CCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC VGKPQVAYRETIRASVEAEGKFVRQSGGRGQFGHVWLKLEPNEEGAGYEFVNAVVGGVIP CCCCCHHHHHHHHHHHHCCCHHEECCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCC REFIPAVDKGIQEQMKNGVLAGFPVLDVKVTLFDGSYHDVDSNEMAFKIAGSMGFKKGAL HHHHHHHHHHHHHHHHCCCEECCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCC EANPALLEPCMKVEVTTPENYMGDVVGDLNRRRGLIEGMDDGFGGIKIVHAVVPLSEMFG CCCHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH YATDLRSATQGRASYSMEFLKYSDAPQNIAKAIIESRS HHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCC >Mature Secondary Structure ARTTPIERYRNIGICAHVDAGKTTTTERVLFYTGLSHKIGEVHDGAATTDWMVQEQERG CCCCCHHHHCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCC ITITSAAVTTFWRGMDAQFTEHRINIIDTPGHVDFTIEVERSLRVLDGAVVVFCGSSGVE EEEEHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEECCCHHHCCCEEEEEECCCCCC PQSETVWRQADKYRVPRLVFINKMDRAGADFERVVKQIRTRLGATCVPIQLNIGAEENFK CCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCHH GVIDLIKMKAINWNESDQGMTFTYEEIPAELAAKAAEMHEYLVEVAAESSDELMDKYLEE HHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC GTLSEDEIKKALRQRTINNEIVLATCGSAFKNKGVQAVLDAVIEFLPAPIDVPPIKGIDE CCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCC NDQEVERPSDDNAPFAALAFKIATDPFVGTLTFIRVYSGVLESGSGVYNSVKQKRERVGR CCHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH MVQMHANDRTELKEVRAGDIAAAIGLKEVTTGDTLCDNDHRVILERMEFPEPVITIAVEP EEEECCCCHHHHHHHHCCCHHHHHCCHHCCCCCCEECCCCHHHHHHHCCCCCEEEEEECC KSKADQDKMGIALQKLAAEDPSFRVETDEESSQTLISGMGELHLDIIVDRMRREFGVECN CCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC VGKPQVAYRETIRASVEAEGKFVRQSGGRGQFGHVWLKLEPNEEGAGYEFVNAVVGGVIP CCCCCHHHHHHHHHHHHCCCHHEECCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCC REFIPAVDKGIQEQMKNGVLAGFPVLDVKVTLFDGSYHDVDSNEMAFKIAGSMGFKKGAL HHHHHHHHHHHHHHHHCCCEECCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCC EANPALLEPCMKVEVTTPENYMGDVVGDLNRRRGLIEGMDDGFGGIKIVHAVVPLSEMFG CCCHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH YATDLRSATQGRASYSMEFLKYSDAPQNIAKAIIESRS HHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA