Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is exeL [H]
Identifier: 160873287
GI number: 160873287
Start: 189362
End: 190549
Strand: Direct
Name: exeL [H]
Synonym: Sbal195_0161
Alternate gene names: 160873287
Gene position: 189362-190549 (Clockwise)
Preceding gene: 160873286
Following gene: 160873288
Centisome position: 3.54
GC content: 50.93
Gene sequence:
>1188_bases GTGAGTGAACGGCTATTTATTCGCTTAGGCAGAACAGCAGAGCAAGCATGCTCTTGGCTCGTTTGGTCTGAGCAAGAACA GGAAATTATCGCCTCTGGCGAGCTCGCCAATGCCCAAGGTTTGTCGACCTTAACTGAGCGTGCGGGTAATCGTCCCGTCG ATGTGTTAGTGCCCGCCGCGGCAATGACACTCACTAGCGTGCATTTGCCCGAAAAAGGCCAACGCCAAGCCTTGAAAGCC TTGCCCTTTATGCTCGAAGAAGCCTTAGCCGAGGACGTCGATGCCATGCATTTTACCGTCGGCCCGCGTGATGGCGATGC CTTAAGCGTGGTCGCCGTGGCCCATGAGCAAATGCAGACTTGGCTGAGTTGTTTGACCGAAGCGGGTTTAAAAGTGAAGC GCATCGTACCTGACTGCTTAGCCTTACCATTGCAAGAGTGCCAATGGGCAGCAATGAATTTTGGTAATGAACTATTACTG CGTACCGGATTAGCCACGGGCCAAAGTTTACCTTTGCCTTGGTTACCGATTGCGCTGGAGCAACTTAGGCCCGCACAGGG CGAAGTGTCTGTCGCCAGTTATACCGACATGCAACTCGAAGGTGTTGAGCTTAAGCCACAATCACTCGAGCTGCCTATGT TAGTGTTAGCCCGCGGTATTCTGCATGCGCCAGTGAACTTACTGGGCGGCGTTTACACGCCTAAGCGCGAATACAGCAAG CAGTTGATGATGTGGAAGAGTGCTGTCATCGTTATCGCCATCGCTTGTGTGCTGGCCTTAGTGAATAAAGGGCTGACCAT ACATCAAGTCAATGGTCAGATTGCCGATCTTAAAGCCCAGAGCGAATCCATTTATCAGCAGCTGGTGCCGGGAAATTCGC GAATTGTTAACCTGCGTTCGCAGATGGAAAGTCAATTACGCGCATTGCAAGGACAAGGCAGTGGCGCCGAGTTTTTTGCC ATGCTTGATGGTTTGCAGGATGCTTTTAAGCAAGTGCCTGAACTTAAACCTAATAGCTTAAGATTCGAAAGCGCGCGTAA CGAGATCCGCATGCAAGTAAGTGCGAAAAACTACGCGCAAATCGAGAAGTTCAAAGAGATCGTTGGACGTCGTTTCCAAC TCGACGGCGGCACTATGAACAGCGGTGAAGATCAAGTCACCAGTACCTTAACCTTGAGGAGCAAATAA
Upstream 100 bases:
>100_bases CAAAAATAATGGCAGTGCTCACCCGGCAGAATCTGGTGGACAAAAATAATAGCAACGAGCTCAGTCACGCTTTCTTGACT GGGACTGGTGGAGAAAAACT
Downstream 100 bases:
>100_bases GATGGATAATTTGCGGACTTGGTGGCAAGGGCTCGCATCGCGCGAGCAGCAGTTAGTCGGTTTTTGTTCGGTATTCTTAG TCATTGGTATTTGTTATTGG
Product: general secretion pathway protein L
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MSERLFIRLGRTAEQACSWLVWSEQEQEIIASGELANAQGLSTLTERAGNRPVDVLVPAAAMTLTSVHLPEKGQRQALKA LPFMLEEALAEDVDAMHFTVGPRDGDALSVVAVAHEQMQTWLSCLTEAGLKVKRIVPDCLALPLQECQWAAMNFGNELLL RTGLATGQSLPLPWLPIALEQLRPAQGEVSVASYTDMQLEGVELKPQSLELPMLVLARGILHAPVNLLGGVYTPKREYSK QLMMWKSAVIVIAIACVLALVNKGLTIHQVNGQIADLKAQSESIYQQLVPGNSRIVNLRSQMESQLRALQGQGSGAEFFA MLDGLQDAFKQVPELKPNSLRFESARNEIRMQVSAKNYAQIEKFKEIVGRRFQLDGGTMNSGEDQVTSTLTLRSK
Sequences:
>Translated_395_residues MSERLFIRLGRTAEQACSWLVWSEQEQEIIASGELANAQGLSTLTERAGNRPVDVLVPAAAMTLTSVHLPEKGQRQALKA LPFMLEEALAEDVDAMHFTVGPRDGDALSVVAVAHEQMQTWLSCLTEAGLKVKRIVPDCLALPLQECQWAAMNFGNELLL RTGLATGQSLPLPWLPIALEQLRPAQGEVSVASYTDMQLEGVELKPQSLELPMLVLARGILHAPVNLLGGVYTPKREYSK QLMMWKSAVIVIAIACVLALVNKGLTIHQVNGQIADLKAQSESIYQQLVPGNSRIVNLRSQMESQLRALQGQGSGAEFFA MLDGLQDAFKQVPELKPNSLRFESARNEIRMQVSAKNYAQIEKFKEIVGRRFQLDGGTMNSGEDQVTSTLTLRSK >Mature_394_residues SERLFIRLGRTAEQACSWLVWSEQEQEIIASGELANAQGLSTLTERAGNRPVDVLVPAAAMTLTSVHLPEKGQRQALKAL PFMLEEALAEDVDAMHFTVGPRDGDALSVVAVAHEQMQTWLSCLTEAGLKVKRIVPDCLALPLQECQWAAMNFGNELLLR TGLATGQSLPLPWLPIALEQLRPAQGEVSVASYTDMQLEGVELKPQSLELPMLVLARGILHAPVNLLGGVYTPKREYSKQ LMMWKSAVIVIAIACVLALVNKGLTIHQVNGQIADLKAQSESIYQQLVPGNSRIVNLRSQMESQLRALQGQGSGAEFFAM LDGLQDAFKQVPELKPNSLRFESARNEIRMQVSAKNYAQIEKFKEIVGRRFQLDGGTMNSGEDQVTSTLTLRSK
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG3297
COG function: function code U; Type II secretory pathway, component PulL
Gene ontology:
Cell location: Cell inner membrane (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP L family [H]
Homologues:
Organism=Escherichia coli, GI87082244, Length=394, Percent_Identity=22.0812182741117, Blast_Score=77, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007812 [H]
Pfam domain/function: PF05134 GspL [H]
EC number: NA
Molecular weight: Translated: 43413; Mature: 43282
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERLFIRLGRTAEQACSWLVWSEQEQEIIASGELANAQGLSTLTERAGNRPVDVLVPAA CCCCEEEEECCCHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEECHH AMTLTSVHLPEKGQRQALKALPFMLEEALAEDVDAMHFTVGPRDGDALSVVAVAHEQMQT HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEHHHHHHHHHHH WLSCLTEAGLKVKRIVPDCLALPLQECQWAAMNFGNELLLRTGLATGQSLPLPWLPIALE HHHHHHHCCCEEHHHCHHHHHCCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHHHHHH QLRPAQGEVSVASYTDMQLEGVELKPQSLELPMLVLARGILHAPVNLLGGVYTPKREYSK HCCCCCCCEEEEEECCCEEECCEECCCCCCCCHHHHHHHHHHCCHHHHCCCCCCHHHHHH QLMMWKSAVIVIAIACVLALVNKGLTIHQVNGQIADLKAQSESIYQQLVPGNSRIVNLRS HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEHHHHHHHHHHHHHCCCCCEEEEHHH QMESQLRALQGQGSGAEFFAMLDGLQDAFKQVPELKPNSLRFESARNEIRMQVSAKNYAQ HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHEEEEECCHHHHH IEKFKEIVGRRFQLDGGTMNSGEDQVTSTLTLRSK HHHHHHHHCCEEEECCCCCCCCCHHHHEEEEECCC >Mature Secondary Structure SERLFIRLGRTAEQACSWLVWSEQEQEIIASGELANAQGLSTLTERAGNRPVDVLVPAA CCCEEEEECCCHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEECHH AMTLTSVHLPEKGQRQALKALPFMLEEALAEDVDAMHFTVGPRDGDALSVVAVAHEQMQT HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEHHHHHHHHHHH WLSCLTEAGLKVKRIVPDCLALPLQECQWAAMNFGNELLLRTGLATGQSLPLPWLPIALE HHHHHHHCCCEEHHHCHHHHHCCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHHHHHH QLRPAQGEVSVASYTDMQLEGVELKPQSLELPMLVLARGILHAPVNLLGGVYTPKREYSK HCCCCCCCEEEEEECCCEEECCEECCCCCCCCHHHHHHHHHHCCHHHHCCCCCCHHHHHH QLMMWKSAVIVIAIACVLALVNKGLTIHQVNGQIADLKAQSESIYQQLVPGNSRIVNLRS HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEHHHHHHHHHHHHHCCCCCEEEEHHH QMESQLRALQGQGSGAEFFAMLDGLQDAFKQVPELKPNSLRFESARNEIRMQVSAKNYAQ HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHEEEEECCHHHHH IEKFKEIVGRRFQLDGGTMNSGEDQVTSTLTLRSK HHHHHHHHCCEEEECCCCCCCCCHHHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8407845 [H]