Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is lprI [H]
Identifier: 160873242
GI number: 160873242
Start: 139135
End: 139773
Strand: Direct
Name: lprI [H]
Synonym: Sbal195_0116
Alternate gene names: 160873242
Gene position: 139135-139773 (Clockwise)
Preceding gene: 160873239
Following gene: 160873243
Centisome position: 2.6
GC content: 47.73
Gene sequence:
>639_bases ATGGCAAAGTTAATCAATAAGATGTTGAATAATCGACTGGGCTTCACTCGGTATTGCGCCGCCGTTGTGATGGTGAGTTC GTTAAGTACAGGAGCGATGGCGGCCGATGTGCCGTCCTTTGACTGCACAAAAGTCGATGTGGGCAGTATCGAAGCTATGG TCTGTAAGGATGCGGGACTGAGCCAACTCGATAATAACTTAGCTGAGGTTTACAGCCAAGCGCTTGAAAAAGCAAAAAAT GAACAGCCACCGACTTTAAAAGCGATGCAGCGTGGTTGGGTGAAAGGCCGTAATGAGTGTTGGAAGAGCGACGATAAACA CGCGTGTATTGAAGCTAGCTATCAAACCCGTATTGCCGAACTGCAGGCGCAATACCGTTTAGTCGATATGACCGGCCCAG TGTTTTATGCCTGTGACGGCAATCCTGCTAATGAAGTCGTGGTGACTTATTTTAAAACCGAACCCGCGACTCTAATTGCT GAACATGGTGATAGTACTTCATTGATGTTTGTACAACCCAGCGGCAGTGGTGCTAAGTATCAAGGCCGCAATGAAAGTCT TTGGGAACATCAAGGCGAAGCGAAAGTGGTTTGGGGCTTCGAAGCGCCAGAAATGACGTGTAAACTGGTGACCAAATAG
Upstream 100 bases:
>100_bases GCAATTTAAGGCATGACTCTTTGAGTCAGGTTAGGTTAAGCCGATCTAGGGTTAGCTATGGCAAGCGTTGAAGTAAACCA CAGAATATAAAGGAATTGAG
Downstream 100 bases:
>100_bases CGTTAATTGAAGGTCGCCATGAAACAAGCCCTTGTGCATATCGCCTTGGTCGTACGAGATTACGATGAGGCGATTGATTT TTATGTGAATAAATTAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MAKLINKMLNNRLGFTRYCAAVVMVSSLSTGAMAADVPSFDCTKVDVGSIEAMVCKDAGLSQLDNNLAEVYSQALEKAKN EQPPTLKAMQRGWVKGRNECWKSDDKHACIEASYQTRIAELQAQYRLVDMTGPVFYACDGNPANEVVVTYFKTEPATLIA EHGDSTSLMFVQPSGSGAKYQGRNESLWEHQGEAKVVWGFEAPEMTCKLVTK
Sequences:
>Translated_212_residues MAKLINKMLNNRLGFTRYCAAVVMVSSLSTGAMAADVPSFDCTKVDVGSIEAMVCKDAGLSQLDNNLAEVYSQALEKAKN EQPPTLKAMQRGWVKGRNECWKSDDKHACIEASYQTRIAELQAQYRLVDMTGPVFYACDGNPANEVVVTYFKTEPATLIA EHGDSTSLMFVQPSGSGAKYQGRNESLWEHQGEAKVVWGFEAPEMTCKLVTK >Mature_211_residues AKLINKMLNNRLGFTRYCAAVVMVSSLSTGAMAADVPSFDCTKVDVGSIEAMVCKDAGLSQLDNNLAEVYSQALEKAKNE QPPTLKAMQRGWVKGRNECWKSDDKHACIEASYQTRIAELQAQYRLVDMTGPVFYACDGNPANEVVVTYFKTEPATLIAE HGDSTSLMFVQPSGSGAKYQGRNESLWEHQGEAKVVWGFEAPEMTCKLVTK
Specific function: Unknown
COG id: COG4461
COG function: function code S; Uncharacterized protein conserved in bacteria, putative lipoprotein
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018660 - InterPro: IPR009739 [H]
Pfam domain/function: PF07007 DUF1311; PF09864 DUF2091 [H]
EC number: NA
Molecular weight: Translated: 23319; Mature: 23188
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLINKMLNNRLGFTRYCAAVVMVSSLSTGAMAADVPSFDCTKVDVGSIEAMVCKDAGL CHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEECCCEEEEEECCCCH SQLDNNLAEVYSQALEKAKNEQPPTLKAMQRGWVKGRNECWKSDDKHACIEASYQTRIAE HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHCCCCCCCEEEEHHHHHHHHH LQAQYRLVDMTGPVFYACDGNPANEVVVTYFKTEPATLIAEHGDSTSLMFVQPSGSGAKY HHHHEEEEEECCCEEEEECCCCCCCEEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCC QGRNESLWEHQGEAKVVWGFEAPEMTCKLVTK CCCCCCHHHCCCCEEEEEECCCCCCEEEEECC >Mature Secondary Structure AKLINKMLNNRLGFTRYCAAVVMVSSLSTGAMAADVPSFDCTKVDVGSIEAMVCKDAGL HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEECCCEEEEEECCCCH SQLDNNLAEVYSQALEKAKNEQPPTLKAMQRGWVKGRNECWKSDDKHACIEASYQTRIAE HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHCCCCCCCEEEEHHHHHHHHH LQAQYRLVDMTGPVFYACDGNPANEVVVTYFKTEPATLIAEHGDSTSLMFVQPSGSGAKY HHHHEEEEEECCCEEEEECCCCCCCEEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCC QGRNESLWEHQGEAKVVWGFEAPEMTCKLVTK CCCCCCHHHCCCCEEEEEECCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]