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The map label for this gene is viuB [H]

Identifier: 160873225

GI number: 160873225

Start: 117705

End: 118463

Strand: Direct

Name: viuB [H]

Synonym: Sbal195_0099

Alternate gene names: 160873225

Gene position: 117705-118463 (Clockwise)

Preceding gene: 160873224

Following gene: 160873227

Centisome position: 2.2

GC content: 48.48

Gene sequence:

>759_bases
ATGAATAAACCTGCACCACGTGAGCTGGCAGTGATCCGCTCGACTTATATCACCCCGCATATGTTACGCATGACCTTAGG
CGGTGCGGGATTCGCTGGTTTTCCTATCGATCAAGAGAGTGCCTATATCAAGTTGTTATTCCCACAAGCGGGTGAACGTC
CCTTGATGCGAACCTACACCATTCGCCAGCAACGTGCTGATGAAATTGATGTGGATTTTGTACTGCACGATACCGACGGC
CCTGCATCGAGCTGGGCGAGAACGGCGCAGGTGGGCGATGTCATTCAAATTGGCGGACCCGGGCTTAAAAAACTGATCAA
CTTTGAGGCGGATTGGTTTTTACTCGCAGGTGATATGACCGCCTTGCCCGCAATTAGCGTGAATCTGGCACAATTACCAA
ACAATGCCGTGGGTTACGCTGTGATTGAAGTATTGAGCGAAGCCGACATTCAGCCTCTTGTGCATCCCGAAAATATTGAG
CTGCATTGGGTGATCAATCCTGAGGCTGATCCCGAAGGTCGCCCTTTGGTTGAGCGAATAGCCCAATTACCTTGGCTTAC
TGGCGAGCCAGCCGTGTGGATTGCTTGTGAATTCAACAGCATGCGCGCACTAAGAAGACACTTTAAGCAAGCGCATTCAT
TACCTAAGAGCCATTTTTATACTTCGAGCTATTGGAAAATAGGCTGTAACGAGGGTGAACATAAGCTGGTTAAACAAGAA
GATGAACAATTAGAAAATGGTGCCAGTGCTAAAGCTTAA

Upstream 100 bases:

>100_bases
CCTGCTCAAAAAAGACCATCCAGTAAGCCAAAAGACCCGATTGGCAAAGGAGCCATTGAGTTGCGCTTAACGGCAGAAAA
CGCCATAGGAGAAAATCATA

Downstream 100 bases:

>100_bases
ATCCTGTTGTTAAACAAACCGAGTTATTAAAAAAGATAAGGTCGCCAAGTTTGATTTTGCGACCTTATTTTATTTGCTAC
TTATGCCACATTTGCGGCGA

Product: siderophore-interacting protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MNKPAPRELAVIRSTYITPHMLRMTLGGAGFAGFPIDQESAYIKLLFPQAGERPLMRTYTIRQQRADEIDVDFVLHDTDG
PASSWARTAQVGDVIQIGGPGLKKLINFEADWFLLAGDMTALPAISVNLAQLPNNAVGYAVIEVLSEADIQPLVHPENIE
LHWVINPEADPEGRPLVERIAQLPWLTGEPAVWIACEFNSMRALRRHFKQAHSLPKSHFYTSSYWKIGCNEGEHKLVKQE
DEQLENGASAKA

Sequences:

>Translated_252_residues
MNKPAPRELAVIRSTYITPHMLRMTLGGAGFAGFPIDQESAYIKLLFPQAGERPLMRTYTIRQQRADEIDVDFVLHDTDG
PASSWARTAQVGDVIQIGGPGLKKLINFEADWFLLAGDMTALPAISVNLAQLPNNAVGYAVIEVLSEADIQPLVHPENIE
LHWVINPEADPEGRPLVERIAQLPWLTGEPAVWIACEFNSMRALRRHFKQAHSLPKSHFYTSSYWKIGCNEGEHKLVKQE
DEQLENGASAKA
>Mature_252_residues
MNKPAPRELAVIRSTYITPHMLRMTLGGAGFAGFPIDQESAYIKLLFPQAGERPLMRTYTIRQQRADEIDVDFVLHDTDG
PASSWARTAQVGDVIQIGGPGLKKLINFEADWFLLAGDMTALPAISVNLAQLPNNAVGYAVIEVLSEADIQPLVHPENIE
LHWVINPEADPEGRPLVERIAQLPWLTGEPAVWIACEFNSMRALRRHFKQAHSLPKSHFYTSSYWKIGCNEGEHKLVKQE
DEQLENGASAKA

Specific function: Involved in intracellular removal of iron from iron- vibriobactin complex. Vibriobactin is an iron-chelating compound involved in the transport of iron from the bacterial environment into the cell cytoplasm [H]

COG id: COG2375

COG function: function code P; Siderophore-interacting protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yqjH [H]

Homologues:

Organism=Escherichia coli, GI1789450, Length=241, Percent_Identity=27.3858921161826, Blast_Score=78, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013113
- InterPro:   IPR017927
- InterPro:   IPR017938
- InterPro:   IPR007037 [H]

Pfam domain/function: PF08021 FAD_binding_9; PF04954 SIP [H]

EC number: NA

Molecular weight: Translated: 28075; Mature: 28075

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKPAPRELAVIRSTYITPHMLRMTLGGAGFAGFPIDQESAYIKLLFPQAGERPLMRTYT
CCCCCCHHHHHHHHHCCCHHHHHEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHH
IRQQRADEIDVDFVLHDTDGPASSWARTAQVGDVIQIGGPGLKKLINFEADWFLLAGDMT
HHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEECCCCHHHHHCCCCCEEEEECCCC
ALPAISVNLAQLPNNAVGYAVIEVLSEADIQPLVHPENIELHWVINPEADPEGRPLVERI
CCCEEEEEHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHH
AQLPWLTGEPAVWIACEFNSMRALRRHFKQAHSLPKSHFYTSSYWKIGCNEGEHKLVKQE
HHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCHHHCCCCCEEEEECCCCCHHHHHHH
DEQLENGASAKA
HHHHHCCCCCCC
>Mature Secondary Structure
MNKPAPRELAVIRSTYITPHMLRMTLGGAGFAGFPIDQESAYIKLLFPQAGERPLMRTYT
CCCCCCHHHHHHHHHCCCHHHHHEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHH
IRQQRADEIDVDFVLHDTDGPASSWARTAQVGDVIQIGGPGLKKLINFEADWFLLAGDMT
HHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEECCCCHHHHHCCCCCEEEEECCCC
ALPAISVNLAQLPNNAVGYAVIEVLSEADIQPLVHPENIELHWVINPEADPEGRPLVERI
CCCEEEEEHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHH
AQLPWLTGEPAVWIACEFNSMRALRRHFKQAHSLPKSHFYTSSYWKIGCNEGEHKLVKQE
HHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCHHHCCCCCEEEEECCCCCHHHHHHH
DEQLENGASAKA
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8083157 [H]