Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160873224
Identifier: 160873224
GI number: 160873224
Start: 117152
End: 117712
Strand: Direct
Name: 160873224
Synonym: Sbal195_0098
Alternate gene names: NA
Gene position: 117152-117712 (Clockwise)
Preceding gene: 160873220
Following gene: 160873225
Centisome position: 2.19
GC content: 48.13
Gene sequence:
>561_bases ATGCCTTCATTGTCACTCAGTGAAACTTTGCACAGATTAGTGCATGCCTACAAAAAGCAATTGCGTAGCGATATTGCTGC ACAAGAGATTGATTTACCTGTCACTCATATCCGTGCCTTGAAGGGCGTGTGTCGCAATCCTGAATCGACAGCTCAGTCTA TCGCCCTGCGTATGCAGCGGGATAAAGCACAAATTACCCGTGTTCTTAATGAGCTACAGCAGAGTGGGTTGATCACTAAA ATCGATAACCCTAAGGATGGCCGCAGCCAGTTGCTGCGACCCACGGCTGAGGGGGAAAAGATCATGACTCAGATCAATGC CTCAGAACGTAAAACCGTGGCGCGCATGACGCAGGCGCTCAGTTCAGCCGAAGTTGATACTTTTATTAAACTTGCCAATC GGATCAGCAAAAGTGTGGATGAGGCGGCTGCCGCTAAAAGTGGTGCGGATTGCCCTGCTCAAAAAAGACCATCCAGTAAG CCAAAAGACCCGATTGGCAAAGGAGCCATTGAGTTGCGCTTAACGGCAGAAAACGCCATAGGAGAAAATCATAATGAATA A
Upstream 100 bases:
>100_bases TTGGTATTCAGTGTCGTGATAATAGTCGACAACCTGAATGGTTGACACAGTCAATCAATCTCGATATTGTTGACACAGTC AACTATATCGAGAACCTTCT
Downstream 100 bases:
>100_bases ACCTGCACCACGTGAGCTGGCAGTGATCCGCTCGACTTATATCACCCCGCATATGTTACGCATGACCTTAGGCGGTGCGG GATTCGCTGGTTTTCCTATC
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcription Regulator; Transcriptional Regulator; Transcriptional Regulator MarR Family Protein
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MPSLSLSETLHRLVHAYKKQLRSDIAAQEIDLPVTHIRALKGVCRNPESTAQSIALRMQRDKAQITRVLNELQQSGLITK IDNPKDGRSQLLRPTAEGEKIMTQINASERKTVARMTQALSSAEVDTFIKLANRISKSVDEAAAAKSGADCPAQKRPSSK PKDPIGKGAIELRLTAENAIGENHNE
Sequences:
>Translated_186_residues MPSLSLSETLHRLVHAYKKQLRSDIAAQEIDLPVTHIRALKGVCRNPESTAQSIALRMQRDKAQITRVLNELQQSGLITK IDNPKDGRSQLLRPTAEGEKIMTQINASERKTVARMTQALSSAEVDTFIKLANRISKSVDEAAAAKSGADCPAQKRPSSK PKDPIGKGAIELRLTAENAIGENHNE >Mature_185_residues PSLSLSETLHRLVHAYKKQLRSDIAAQEIDLPVTHIRALKGVCRNPESTAQSIALRMQRDKAQITRVLNELQQSGLITKI DNPKDGRSQLLRPTAEGEKIMTQINASERKTVARMTQALSSAEVDTFIKLANRISKSVDEAAAAKSGADCPAQKRPSSKP KDPIGKGAIELRLTAENAIGENHNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20356; Mature: 20224
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSLSLSETLHRLVHAYKKQLRSDIAAQEIDLPVTHIRALKGVCRNPESTAQSIALRMQR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH DKAQITRVLNELQQSGLITKIDNPKDGRSQLLRPTAEGEKIMTQINASERKTVARMTQAL HHHHHHHHHHHHHHCCCEEECCCCCCHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHH SSAEVDTFIKLANRISKSVDEAAAAKSGADCPAQKRPSSKPKDPIGKGAIELRLTAENAI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHC GENHNE CCCCCC >Mature Secondary Structure PSLSLSETLHRLVHAYKKQLRSDIAAQEIDLPVTHIRALKGVCRNPESTAQSIALRMQR CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH DKAQITRVLNELQQSGLITKIDNPKDGRSQLLRPTAEGEKIMTQINASERKTVARMTQAL HHHHHHHHHHHHHHCCCEEECCCCCCHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHH SSAEVDTFIKLANRISKSVDEAAAAKSGADCPAQKRPSSKPKDPIGKGAIELRLTAENAI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHC GENHNE CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA