Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160873216
Identifier: 160873216
GI number: 160873216
Start: 107476
End: 108558
Strand: Direct
Name: 160873216
Synonym: Sbal195_0090
Alternate gene names: NA
Gene position: 107476-108558 (Clockwise)
Preceding gene: 160873215
Following gene: 160873218
Centisome position: 2.01
GC content: 47.74
Gene sequence:
>1083_bases ATGAATTTAGGTCGTTACACTGAATCTGCCCGCCTGCACTTACGGCAAGTAATCAAGCCTTTGCCTAGCGAGCTCCAGCT AGGGTTGAGCAAGTTGTGGCGCTACCTAAGCCAAGGGTTTGCTAAGTTATCCTTTGCGCAAAAGCTGTATCTTATTGCCT TGATATTGGCCTTTAGTACCGACTTGATGGGTGTGGTCGCCGTGATTGCGGTTATTGCTATGGCCATCGAGTTTTGGCCC GTGTTCGAGCGGGTCTGGCACAGTTTGGCGGGCAAGGCCGTGTTGTTGCTGTTTTACGCCATTATTGCCAACTTTGCCTT AGGTTGGTCTGGCGCCATAGTTAACGAAGTGGTCGGGGTGTCGGCAAGTCATCTGGACTACACCCATAACTTAGCGATTT TACTCTATATGCCCGCTTGGTTTTTAATGGTGAGCGCAATTGTGCTGCTGGCATTGCAGTTGATTATCCCCATCTATTTA GTCTTAATTTTTTTGCTTAAACCTTTAGGTGTCAAATCGTTACGGATCACCTCACATACATCATTTCGTAAAACGACCTT TACGATCCGTATCGTGTTGGCGGCTGTGGTCTTATATCACTTGAGCTTACTGATTGATTTAGAAACCCGCCTTCAAACCT CGTTCGCAGACTTTATTACAACAACTCAAGAAGCCTCTGAACATAATCCCGTCGAGCCAGCATTAGGGCTTATGCCGCAT ACGACCGATGTGCTGACGGCACCGATTGCTGAGTTAGCTAAGATTAAGCCCGAGCTTGAAGCCAACAAACCGGCTGATAA ACAAACTGCCGATGAGCGCGAAGAAGCGGAACGCAAGCAAACCTATGCGTCGGTGCGGGCGCAATATCAGTATCTCGTGC GGCAGTGGTTAGCGACGTTTGCCTTTGCGCTTGAAGCCAATAGCCGTTCGCGTTGTGAAAAGCCAGCCGAGTCGAATGTG ATCGAGTTAAATGACTATGAGATTTTGCAGATAACGCCGGATAAGAAAGCGGATTATGGTTATCGTTTTGAGGTGAAAAA GTGTATCTCGGCCGCATTTCCTTTGACGGAAAAGGGCAAATAA
Upstream 100 bases:
>100_bases TCGCTACACTGGCATAGGTGACGCGAGTGTCGCCATAGATTTTGCAGCTTACATCGGCAACTCAAGCGTGTCTTAATCGT AACCGGAATTTAAAATTATA
Downstream 100 bases:
>100_bases GCTGCCCCATAAAAAAGCGACCATAAGGTCGCTTTCATTTTGGCTAAATCAGCTTGGCTGAGTGAGTCGACTATCGTGTT ATTCAACAATCACGTTATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MNLGRYTESARLHLRQVIKPLPSELQLGLSKLWRYLSQGFAKLSFAQKLYLIALILAFSTDLMGVVAVIAVIAMAIEFWP VFERVWHSLAGKAVLLLFYAIIANFALGWSGAIVNEVVGVSASHLDYTHNLAILLYMPAWFLMVSAIVLLALQLIIPIYL VLIFLLKPLGVKSLRITSHTSFRKTTFTIRIVLAAVVLYHLSLLIDLETRLQTSFADFITTTQEASEHNPVEPALGLMPH TTDVLTAPIAELAKIKPELEANKPADKQTADEREEAERKQTYASVRAQYQYLVRQWLATFAFALEANSRSRCEKPAESNV IELNDYEILQITPDKKADYGYRFEVKKCISAAFPLTEKGK
Sequences:
>Translated_360_residues MNLGRYTESARLHLRQVIKPLPSELQLGLSKLWRYLSQGFAKLSFAQKLYLIALILAFSTDLMGVVAVIAVIAMAIEFWP VFERVWHSLAGKAVLLLFYAIIANFALGWSGAIVNEVVGVSASHLDYTHNLAILLYMPAWFLMVSAIVLLALQLIIPIYL VLIFLLKPLGVKSLRITSHTSFRKTTFTIRIVLAAVVLYHLSLLIDLETRLQTSFADFITTTQEASEHNPVEPALGLMPH TTDVLTAPIAELAKIKPELEANKPADKQTADEREEAERKQTYASVRAQYQYLVRQWLATFAFALEANSRSRCEKPAESNV IELNDYEILQITPDKKADYGYRFEVKKCISAAFPLTEKGK >Mature_360_residues MNLGRYTESARLHLRQVIKPLPSELQLGLSKLWRYLSQGFAKLSFAQKLYLIALILAFSTDLMGVVAVIAVIAMAIEFWP VFERVWHSLAGKAVLLLFYAIIANFALGWSGAIVNEVVGVSASHLDYTHNLAILLYMPAWFLMVSAIVLLALQLIIPIYL VLIFLLKPLGVKSLRITSHTSFRKTTFTIRIVLAAVVLYHLSLLIDLETRLQTSFADFITTTQEASEHNPVEPALGLMPH TTDVLTAPIAELAKIKPELEANKPADKQTADEREEAERKQTYASVRAQYQYLVRQWLATFAFALEANSRSRCEKPAESNV IELNDYEILQITPDKKADYGYRFEVKKCISAAFPLTEKGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40472; Mature: 40472
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLGRYTESARLHLRQVIKPLPSELQLGLSKLWRYLSQGFAKLSFAQKLYLIALILAFST CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLMGVVAVIAVIAMAIEFWPVFERVWHSLAGKAVLLLFYAIIANFALGWSGAIVNEVVGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC SASHLDYTHNLAILLYMPAWFLMVSAIVLLALQLIIPIYLVLIFLLKPLGVKSLRITSHT CHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC SFRKTTFTIRIVLAAVVLYHLSLLIDLETRLQTSFADFITTTQEASEHNPVEPALGLMPH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCC TTDVLTAPIAELAKIKPELEANKPADKQTADEREEAERKQTYASVRAQYQYLVRQWLATF CHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFALEANSRSRCEKPAESNVIELNDYEILQITPDKKADYGYRFEVKKCISAAFPLTEKGK HHHHCCCCHHHCCCCCCCCEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNLGRYTESARLHLRQVIKPLPSELQLGLSKLWRYLSQGFAKLSFAQKLYLIALILAFST CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLMGVVAVIAVIAMAIEFWPVFERVWHSLAGKAVLLLFYAIIANFALGWSGAIVNEVVGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC SASHLDYTHNLAILLYMPAWFLMVSAIVLLALQLIIPIYLVLIFLLKPLGVKSLRITSHT CHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC SFRKTTFTIRIVLAAVVLYHLSLLIDLETRLQTSFADFITTTQEASEHNPVEPALGLMPH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCC TTDVLTAPIAELAKIKPELEANKPADKQTADEREEAERKQTYASVRAQYQYLVRQWLATF CHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFALEANSRSRCEKPAESNVIELNDYEILQITPDKKADYGYRFEVKKCISAAFPLTEKGK HHHHCCCCHHHCCCCCCCCEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA